RNA–Protein interactions for RNA: ENST00000497437.1

SVBP-203, Transcript of small vasohibin binding protein, humanhuman

TSL 3

Gene SVBP, Length 708 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVBP-203ENST00000497437 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
SVBP-203ENST00000497437 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
SVBP-203ENST00000497437 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
SVBP-203ENST00000497437 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
SVBP-203ENST00000497437 FOXD1Q16676 465 aa22.5■■□□□ 1.19
SVBP-203ENST00000497437 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
SVBP-203ENST00000497437 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
SVBP-203ENST00000497437 ADRA2BP18089 450 aa21.57■■□□□ 1.04
SVBP-203ENST00000497437 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
SVBP-203ENST00000497437 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
SVBP-203ENST00000497437 MSH5O43196 834 aa20.76■□□□□ 0.91
SVBP-203ENST00000497437 ABCC9O60706 1549 aa20.48■□□□□ 0.87
SVBP-203ENST00000497437 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
SVBP-203ENST00000497437 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
SVBP-203ENST00000497437 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
SVBP-203ENST00000497437 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
SVBP-203ENST00000497437 MAPK8IP2Q13387 824 aaPredicted RBP19.61■□□□□ 0.73
SVBP-203ENST00000497437 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
SVBP-203ENST00000497437 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
SVBP-203ENST00000497437 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
SVBP-203ENST00000497437 KCNA4P22459 653 aa19.23■□□□□ 0.67
SVBP-203ENST00000497437 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
SVBP-203ENST00000497437 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
SVBP-203ENST00000497437 NACADO15069 1562 aa19.11■□□□□ 0.65
SVBP-203ENST00000497437 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
SVBP-203ENST00000497437 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
SVBP-203ENST00000497437 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
SVBP-203ENST00000497437 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
SVBP-203ENST00000497437 HOXD11P31277 338 aaPredicted RBP18.83■□□□□ 0.6
SVBP-203ENST00000497437 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
SVBP-203ENST00000497437 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
SVBP-203ENST00000497437 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
SVBP-203ENST00000497437 DCAF8L1A6NGE4 600 aa18.57■□□□□ 0.56
SVBP-203ENST00000497437 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
SVBP-203ENST00000497437 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
SVBP-203ENST00000497437 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
SVBP-203ENST00000497437 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
SVBP-203ENST00000497437 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
SVBP-203ENST00000497437 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
SVBP-203ENST00000497437 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
SVBP-203ENST00000497437 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
SVBP-203ENST00000497437 SCRIBQ14160 1630 aa18.23■□□□□ 0.51
SVBP-203ENST00000497437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.48
SVBP-203ENST00000497437 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
SVBP-203ENST00000497437 CUX2O14529 1486 aa17.82■□□□□ 0.44
SVBP-203ENST00000497437 RNF39Q9H2S5 420 aa17.78■□□□□ 0.44
SVBP-203ENST00000497437 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
SVBP-203ENST00000497437 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
SVBP-203ENST00000497437 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
SVBP-203ENST00000497437 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
SVBP-203ENST00000497437 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
SVBP-203ENST00000497437 ZBTB22O15209 634 aa17.68■□□□□ 0.42
SVBP-203ENST00000497437 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
SVBP-203ENST00000497437 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
SVBP-203ENST00000497437 MYCNP04198 464 aaPredicted RBP17.5■□□□□ 0.39
SVBP-203ENST00000497437 NESP48681 1621 aa17.49■□□□□ 0.39
SVBP-203ENST00000497437 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
SVBP-203ENST00000497437 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
SVBP-203ENST00000497437 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
SVBP-203ENST00000497437 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
SVBP-203ENST00000497437 SMARCA4P51532 1647 aa17.39■□□□□ 0.37
SVBP-203ENST00000497437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.38■□□□□ 0.37
SVBP-203ENST00000497437 HNRNPUL2Q1KMD3 747 aaKnown RBP17.38■□□□□ 0.37
SVBP-203ENST00000497437 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
SVBP-203ENST00000497437 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
SVBP-203ENST00000497437 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
SVBP-203ENST00000497437 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
SVBP-203ENST00000497437 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
SVBP-203ENST00000497437 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
SVBP-203ENST00000497437 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
SVBP-203ENST00000497437 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
SVBP-203ENST00000497437 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
SVBP-203ENST00000497437 APLP2Q06481 763 aa17.23■□□□□ 0.35
SVBP-203ENST00000497437 CAPN15O75808 1086 aa17.21■□□□□ 0.35
SVBP-203ENST00000497437 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
SVBP-203ENST00000497437 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
SVBP-203ENST00000497437 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
SVBP-203ENST00000497437 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
SVBP-203ENST00000497437 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
SVBP-203ENST00000497437 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
SVBP-203ENST00000497437 WDR62O43379 1518 aa17.05■□□□□ 0.32
SVBP-203ENST00000497437 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
SVBP-203ENST00000497437 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
SVBP-203ENST00000497437 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
SVBP-203ENST00000497437 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
SVBP-203ENST00000497437 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
SVBP-203ENST00000497437 DSG3P32926 999 aa16.9■□□□□ 0.3
SVBP-203ENST00000497437 ABCB7O75027 752 aa16.89■□□□□ 0.29
SVBP-203ENST00000497437 CFTRP13569 1480 aa16.87■□□□□ 0.29
SVBP-203ENST00000497437 WIZO95785 1651 aa16.85■□□□□ 0.29
SVBP-203ENST00000497437 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
SVBP-203ENST00000497437 POLA2Q14181 598 aa16.77■□□□□ 0.28
SVBP-203ENST00000497437 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
SVBP-203ENST00000497437 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
SVBP-203ENST00000497437 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
SVBP-203ENST00000497437 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
SVBP-203ENST00000497437 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
SVBP-203ENST00000497437 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
SVBP-203ENST00000497437 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
SVBP-203ENST00000497437 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 648.7 ms