RNA–Protein interactions for RNA: ENST00000497221.1

DUSP28-205, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 488 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-205ENST00000497221 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
DUSP28-205ENST00000497221 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
DUSP28-205ENST00000497221 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
DUSP28-205ENST00000497221 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
DUSP28-205ENST00000497221 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
DUSP28-205ENST00000497221 FOXD1Q16676 465 aa16.59■□□□□ 0.25
DUSP28-205ENST00000497221 MSH5O43196 834 aa15.78■□□□□ 0.12
DUSP28-205ENST00000497221 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
DUSP28-205ENST00000497221 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
DUSP28-205ENST00000497221 ADRA2BP18089 450 aa14.84□□□□□ -0.03
DUSP28-205ENST00000497221 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
DUSP28-205ENST00000497221 NISCHQ9Y2I1 1504 aa14.05□□□□□ -0.16
DUSP28-205ENST00000497221 CACNB1Q02641 598 aaPredicted RBP14.02□□□□□ -0.17
DUSP28-205ENST00000497221 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.18
DUSP28-205ENST00000497221 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
DUSP28-205ENST00000497221 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
DUSP28-205ENST00000497221 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
DUSP28-205ENST00000497221 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
DUSP28-205ENST00000497221 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
DUSP28-205ENST00000497221 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
DUSP28-205ENST00000497221 POTEHQ6S545 545 aa12.96□□□□□ -0.33
DUSP28-205ENST00000497221 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
DUSP28-205ENST00000497221 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
DUSP28-205ENST00000497221 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
DUSP28-205ENST00000497221 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
DUSP28-205ENST00000497221 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
DUSP28-205ENST00000497221 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
DUSP28-205ENST00000497221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
DUSP28-205ENST00000497221 ABCC9O60706 1549 aa12.45□□□□□ -0.42
DUSP28-205ENST00000497221 KCNA4P22459 653 aa12.41□□□□□ -0.42
DUSP28-205ENST00000497221 DSG3P32926 999 aa12.31□□□□□ -0.44
DUSP28-205ENST00000497221 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
DUSP28-205ENST00000497221 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
DUSP28-205ENST00000497221 CAPN15O75808 1086 aa12.18□□□□□ -0.46
DUSP28-205ENST00000497221 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
DUSP28-205ENST00000497221 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
DUSP28-205ENST00000497221 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
DUSP28-205ENST00000497221 NACADO15069 1562 aa11.84□□□□□ -0.51
DUSP28-205ENST00000497221 ABCB7O75027 752 aa11.84□□□□□ -0.51
DUSP28-205ENST00000497221 TRHP20396 242 aaPredicted RBP11.81□□□□□ -0.52
DUSP28-205ENST00000497221 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
DUSP28-205ENST00000497221 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
DUSP28-205ENST00000497221 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
DUSP28-205ENST00000497221 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
DUSP28-205ENST00000497221 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
DUSP28-205ENST00000497221 UNC13AQ9UPW8 1703 aa11.71□□□□□ -0.54
DUSP28-205ENST00000497221 MYO15BQ96JP2 1530 aa11.68□□□□□ -0.54
DUSP28-205ENST00000497221 ZCCHC6Q5VYS8 1495 aaKnown RBP11.66□□□□□ -0.54
DUSP28-205ENST00000497221 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
DUSP28-205ENST00000497221 APLP2Q06481 763 aa11.64□□□□□ -0.55
DUSP28-205ENST00000497221 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
DUSP28-205ENST00000497221 DCAF1Q9Y4B6 1507 aa11.59□□□□□ -0.55
DUSP28-205ENST00000497221 BICRAQ9NZM4 1560 aa11.52□□□□□ -0.57
DUSP28-205ENST00000497221 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
DUSP28-205ENST00000497221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
DUSP28-205ENST00000497221 HNRNPUL2Q1KMD3 747 aaKnown RBP11.47□□□□□ -0.57
DUSP28-205ENST00000497221 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
DUSP28-205ENST00000497221 ZBTB22O15209 634 aa11.45□□□□□ -0.58
DUSP28-205ENST00000497221 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
DUSP28-205ENST00000497221 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
DUSP28-205ENST00000497221 HAX1O00165 279 aa11.36□□□□□ -0.59
DUSP28-205ENST00000497221 MYCNP04198 464 aaPredicted RBP11.36□□□□□ -0.59
DUSP28-205ENST00000497221 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
DUSP28-205ENST00000497221 POLA2Q14181 598 aa11.33□□□□□ -0.6
DUSP28-205ENST00000497221 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
DUSP28-205ENST00000497221 AKT1S1Q96B36 256 aa11.31□□□□□ -0.6
DUSP28-205ENST00000497221 EHMT2Q96KQ7 1210 aa11.27□□□□□ -0.61
DUSP28-205ENST00000497221 CC2D2AQ9P2K1 1620 aa11.26□□□□□ -0.61
DUSP28-205ENST00000497221 EIF4G1Q04637 1599 aaKnown RBP11.25□□□□□ -0.61
DUSP28-205ENST00000497221 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
DUSP28-205ENST00000497221 EVX2Q03828 476 aa11.21□□□□□ -0.61
DUSP28-205ENST00000497221 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
DUSP28-205ENST00000497221 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
DUSP28-205ENST00000497221 ATXN8OSP0DMR3 200 aa11.17□□□□□ -0.62
DUSP28-205ENST00000497221 PITPNM1O00562 1244 aa11.11□□□□□ -0.63
DUSP28-205ENST00000497221 LHX8Q68G74 356 aa11.04□□□□□ -0.64
DUSP28-205ENST00000497221 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
DUSP28-205ENST00000497221 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
DUSP28-205ENST00000497221 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
DUSP28-205ENST00000497221 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
DUSP28-205ENST00000497221 SMARCA4P51532 1647 aa10.96□□□□□ -0.65
DUSP28-205ENST00000497221 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
DUSP28-205ENST00000497221 SMARCA2P51531 1590 aa10.91□□□□□ -0.66
DUSP28-205ENST00000497221 NCAPD3P42695 1498 aa10.9□□□□□ -0.66
DUSP28-205ENST00000497221 ATAD2BQ9ULI0 1458 aa10.9□□□□□ -0.66
DUSP28-205ENST00000497221 GABBR2O75899 941 aa10.88□□□□□ -0.67
DUSP28-205ENST00000497221 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
DUSP28-205ENST00000497221 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
DUSP28-205ENST00000497221 BAZ1BQ9UIG0 1483 aaKnown RBP10.84□□□□□ -0.67
DUSP28-205ENST00000497221 MROH2BQ7Z745 1585 aa10.83□□□□□ -0.68
DUSP28-205ENST00000497221 PRKAR2AP13861 404 aaKnown RBP10.81□□□□□ -0.68
DUSP28-205ENST00000497221 PEG3Q9GZU2 1588 aa10.81□□□□□ -0.68
DUSP28-205ENST00000497221 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
DUSP28-205ENST00000497221 WIZO95785 1651 aa10.76□□□□□ -0.69
DUSP28-205ENST00000497221 NESP48681 1621 aa10.72□□□□□ -0.69
DUSP28-205ENST00000497221 LAMC3Q9Y6N6 1575 aa10.69□□□□□ -0.7
DUSP28-205ENST00000497221 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
DUSP28-205ENST00000497221 CUX2O14529 1486 aa10.66□□□□□ -0.7
DUSP28-205ENST00000497221 KIF21AQ7Z4S6 1674 aa10.64□□□□□ -0.71
DUSP28-205ENST00000497221 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms