RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
TMC1-206ENST00000497073 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
TMC1-206ENST00000497073 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
TMC1-206ENST00000497073 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
TMC1-206ENST00000497073 POTEDQ86YR6 584 aa21.95■■□□□ 1.1
TMC1-206ENST00000497073 FOXD1Q16676 465 aa21.48■■□□□ 1.03
TMC1-206ENST00000497073 MSH5O43196 834 aa20.47■□□□□ 0.87
TMC1-206ENST00000497073 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
TMC1-206ENST00000497073 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
TMC1-206ENST00000497073 ADRA2BP18089 450 aa19.1■□□□□ 0.65
TMC1-206ENST00000497073 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
TMC1-206ENST00000497073 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
TMC1-206ENST00000497073 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
TMC1-206ENST00000497073 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
TMC1-206ENST00000497073 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
TMC1-206ENST00000497073 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
TMC1-206ENST00000497073 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
TMC1-206ENST00000497073 DCAF8L1A6NGE4 600 aa17.25■□□□□ 0.35
TMC1-206ENST00000497073 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
TMC1-206ENST00000497073 POTEHQ6S545 545 aa16.96■□□□□ 0.31
TMC1-206ENST00000497073 HOXD11P31277 338 aaPredicted RBP16.86■□□□□ 0.29
TMC1-206ENST00000497073 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
TMC1-206ENST00000497073 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
TMC1-206ENST00000497073 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
TMC1-206ENST00000497073 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
TMC1-206ENST00000497073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
TMC1-206ENST00000497073 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
TMC1-206ENST00000497073 DSG3P32926 999 aa15.92■□□□□ 0.14
TMC1-206ENST00000497073 ABCC9O60706 1549 aa15.78■□□□□ 0.12
TMC1-206ENST00000497073 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
TMC1-206ENST00000497073 CAPN15O75808 1086 aa15.71■□□□□ 0.11
TMC1-206ENST00000497073 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
TMC1-206ENST00000497073 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
TMC1-206ENST00000497073 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
TMC1-206ENST00000497073 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
TMC1-206ENST00000497073 ABCB7O75027 752 aa15.28■□□□□ 0.04
TMC1-206ENST00000497073 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
TMC1-206ENST00000497073 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
TMC1-206ENST00000497073 RBM42Q9BTD8 480 aaKnown RBP15.16■□□□□ 0.02
TMC1-206ENST00000497073 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
TMC1-206ENST00000497073 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
TMC1-206ENST00000497073 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
TMC1-206ENST00000497073 NACADO15069 1562 aa15.1■□□□□ 0.01
TMC1-206ENST00000497073 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
TMC1-206ENST00000497073 APLP2Q06481 763 aa14.95□□□□□ -0.02
TMC1-206ENST00000497073 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
TMC1-206ENST00000497073 DCAF1Q9Y4B6 1507 aa14.85□□□□□ -0.03
TMC1-206ENST00000497073 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
TMC1-206ENST00000497073 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
TMC1-206ENST00000497073 HAX1O00165 279 aa14.74□□□□□ -0.05
TMC1-206ENST00000497073 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
TMC1-206ENST00000497073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
TMC1-206ENST00000497073 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
TMC1-206ENST00000497073 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
TMC1-206ENST00000497073 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.07
TMC1-206ENST00000497073 BICRAQ9NZM4 1560 aa14.57□□□□□ -0.08
TMC1-206ENST00000497073 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
TMC1-206ENST00000497073 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
TMC1-206ENST00000497073 EVX2Q03828 476 aa14.54□□□□□ -0.08
TMC1-206ENST00000497073 POLA2Q14181 598 aa14.54□□□□□ -0.08
TMC1-206ENST00000497073 SCRIBQ14160 1630 aa14.54□□□□□ -0.08
TMC1-206ENST00000497073 REM2Q8IYK8 340 aaPredicted RBP14.49□□□□□ -0.09
TMC1-206ENST00000497073 FXR2P51116 673 aaKnown RBP eCLIP14.45□□□□□ -0.1
TMC1-206ENST00000497073 PLSCR2Q9NRY7 297 aa14.42□□□□□ -0.1
TMC1-206ENST00000497073 LHX8Q68G74 356 aa14.39□□□□□ -0.11
TMC1-206ENST00000497073 PITPNM1O00562 1244 aa14.36□□□□□ -0.11
TMC1-206ENST00000497073 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
TMC1-206ENST00000497073 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
TMC1-206ENST00000497073 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
TMC1-206ENST00000497073 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
TMC1-206ENST00000497073 GABBR2O75899 941 aa14.1□□□□□ -0.15
TMC1-206ENST00000497073 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
TMC1-206ENST00000497073 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
TMC1-206ENST00000497073 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
TMC1-206ENST00000497073 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
TMC1-206ENST00000497073 PRKAR2AP13861 404 aaKnown RBP13.95□□□□□ -0.18
TMC1-206ENST00000497073 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
TMC1-206ENST00000497073 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
TMC1-206ENST00000497073 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
TMC1-206ENST00000497073 SMARCA4P51532 1647 aa13.9□□□□□ -0.19
TMC1-206ENST00000497073 KCNA4P22459 653 aa13.88□□□□□ -0.19
TMC1-206ENST00000497073 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
TMC1-206ENST00000497073 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
TMC1-206ENST00000497073 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
TMC1-206ENST00000497073 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
TMC1-206ENST00000497073 MROH2BQ7Z745 1585 aa13.78□□□□□ -0.2
TMC1-206ENST00000497073 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
TMC1-206ENST00000497073 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
TMC1-206ENST00000497073 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
TMC1-206ENST00000497073 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
TMC1-206ENST00000497073 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
TMC1-206ENST00000497073 POTEMA6NI47 508 aa13.62□□□□□ -0.23
TMC1-206ENST00000497073 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
TMC1-206ENST00000497073 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
TMC1-206ENST00000497073 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
TMC1-206ENST00000497073 WIZO95785 1651 aa13.59□□□□□ -0.23
TMC1-206ENST00000497073 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
TMC1-206ENST00000497073 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
TMC1-206ENST00000497073 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
TMC1-206ENST00000497073 NESP48681 1621 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms