RNA–Protein interactions for RNA: ENST00000497019.6

NTRK1-205, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 2

Gene NTRK1, Length 2,508 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-205ENST00000497019 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
NTRK1-205ENST00000497019 SHROOM4Q9ULL8 1493 aa31.75■■■□□ 2.67
NTRK1-205ENST00000497019 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
NTRK1-205ENST00000497019 SUPT5HO00267 1087 aaKnown RBP31.34■■■□□ 2.61
NTRK1-205ENST00000497019 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
NTRK1-205ENST00000497019 CHIC1Q5VXU3 224 aa30.75■■■□□ 2.51
NTRK1-205ENST00000497019 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.5
NTRK1-205ENST00000497019 HRCP23327 699 aa30.68■■■□□ 2.5
NTRK1-205ENST00000497019 DCAF8L2P0C7V8 631 aa30.47■■■□□ 2.47
NTRK1-205ENST00000497019 DCAF1Q9Y4B6 1507 aa30.44■■■□□ 2.46
NTRK1-205ENST00000497019 PCGF6Q9BYE7 350 aa30.14■■■□□ 2.42
NTRK1-205ENST00000497019 PPARGC1BQ86YN6 1023 aaKnown RBP29.82■■■□□ 2.36
NTRK1-205ENST00000497019 LOC105371045A0A1W2PR82 267 aa29.81■■■□□ 2.36
NTRK1-205ENST00000497019 ABCC9O60706 1549 aa29.7■■■□□ 2.34
NTRK1-205ENST00000497019 TRIM26Q12899 539 aaPredicted RBP29.54■■■□□ 2.32
NTRK1-205ENST00000497019 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
NTRK1-205ENST00000497019 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
NTRK1-205ENST00000497019 TRIM41Q8WV44 630 aa29.2■■■□□ 2.27
NTRK1-205ENST00000497019 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.26
NTRK1-205ENST00000497019 ZEB1P37275 1124 aaPredicted RBP29.19■■■□□ 2.26
NTRK1-205ENST00000497019 FAM9AQ8IZU1 332 aaPredicted RBP28.92■■■□□ 2.22
NTRK1-205ENST00000497019 NACADO15069 1562 aa28.86■■■□□ 2.21
NTRK1-205ENST00000497019 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
NTRK1-205ENST00000497019 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
NTRK1-205ENST00000497019 PELP1Q8IZL8 1130 aaKnown RBP28.8■■■□□ 2.2
NTRK1-205ENST00000497019 WIZO95785 1651 aa28.63■■■□□ 2.17
NTRK1-205ENST00000497019 EHMT2Q96KQ7 1210 aa28.59■■■□□ 2.17
NTRK1-205ENST00000497019 SCAF1Q9H7N4 1312 aaKnown RBP28.59■■■□□ 2.17
NTRK1-205ENST00000497019 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
NTRK1-205ENST00000497019 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
NTRK1-205ENST00000497019 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
NTRK1-205ENST00000497019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.21■■■□□ 2.11
NTRK1-205ENST00000497019 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
NTRK1-205ENST00000497019 CCER1Q8TC90 406 aaPredicted RBP28.16■■■□□ 2.1
NTRK1-205ENST00000497019 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
NTRK1-205ENST00000497019 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.1
NTRK1-205ENST00000497019 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
NTRK1-205ENST00000497019 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
NTRK1-205ENST00000497019 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
NTRK1-205ENST00000497019 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
NTRK1-205ENST00000497019 NEUROD1Q13562 356 aa28.01■■■□□ 2.07
NTRK1-205ENST00000497019 TNIKQ9UKE5 1360 aa28.01■■■□□ 2.07
NTRK1-205ENST00000497019 SOGA1O94964 1423 aa27.98■■■□□ 2.07
NTRK1-205ENST00000497019 EEA1Q15075 1411 aa27.95■■■□□ 2.07
NTRK1-205ENST00000497019 DIEXFQ68CQ4 756 aaKnown RBP27.93■■■□□ 2.06
NTRK1-205ENST00000497019 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
NTRK1-205ENST00000497019 CENPBP07199 599 aaPredicted RBP27.86■■■□□ 2.05
NTRK1-205ENST00000497019 UNC13AQ9UPW8 1703 aa27.83■■■□□ 2.05
NTRK1-205ENST00000497019 RUSC2Q8N2Y8 1516 aa27.81■■■□□ 2.04
NTRK1-205ENST00000497019 TTBK1Q5TCY1 1321 aaPredicted RBP27.79■■■□□ 2.04
NTRK1-205ENST00000497019 GTF3C3Q9Y5Q9 886 aa27.77■■■□□ 2.04
NTRK1-205ENST00000497019 GOLGA3Q08378 1498 aa27.74■■■□□ 2.03
NTRK1-205ENST00000497019 UBTFP17480 764 aaKnown RBP27.74■■■□□ 2.03
NTRK1-205ENST00000497019 ZNF316A6NFI3 1004 aaPredicted RBP27.61■■■□□ 2.01
NTRK1-205ENST00000497019 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
NTRK1-205ENST00000497019 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
NTRK1-205ENST00000497019 MYT1Q01538 1121 aa27.55■■■□□ 2
NTRK1-205ENST00000497019 BICRAQ9NZM4 1560 aa27.53■■■□□ 2
NTRK1-205ENST00000497019 KIF21BO75037 1637 aa27.52■■■□□ 2
NTRK1-205ENST00000497019 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
NTRK1-205ENST00000497019 PABPN1Q86U42 306 aaKnown RBP eCLIP27.45■■□□□ 1.98
NTRK1-205ENST00000497019 CLIP1P30622 1438 aa27.44■■□□□ 1.98
NTRK1-205ENST00000497019 VPS8Q8N3P4 1428 aa27.39■■□□□ 1.97
NTRK1-205ENST00000497019 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
NTRK1-205ENST00000497019 HNRNPUL2Q1KMD3 747 aaKnown RBP27.34■■□□□ 1.97
NTRK1-205ENST00000497019 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
NTRK1-205ENST00000497019 RAPGEF2Q9Y4G8 1499 aa27.28■■□□□ 1.96
NTRK1-205ENST00000497019 MIER1Q8N108 512 aa27.25■■□□□ 1.95
NTRK1-205ENST00000497019 APLP2Q06481 763 aa27.21■■□□□ 1.95
NTRK1-205ENST00000497019 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
NTRK1-205ENST00000497019 TOP2BQ02880 1626 aa27.14■■□□□ 1.94
NTRK1-205ENST00000497019 CLSPNQ9HAW4 1339 aa27.05■■□□□ 1.92
NTRK1-205ENST00000497019 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
NTRK1-205ENST00000497019 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
NTRK1-205ENST00000497019 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
NTRK1-205ENST00000497019 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
NTRK1-205ENST00000497019 ARAP1Q96P48 1450 aa26.96■■□□□ 1.91
NTRK1-205ENST00000497019 DHX57Q6P158 1386 aaKnown RBP26.95■■□□□ 1.9
NTRK1-205ENST00000497019 KANK4Q5T7N3 995 aaPredicted RBP26.86■■□□□ 1.89
NTRK1-205ENST00000497019 RRBP1Q9P2E9 1410 aaKnown RBP26.83■■□□□ 1.89
NTRK1-205ENST00000497019 CUX1P39880 1505 aa26.79■■□□□ 1.88
NTRK1-205ENST00000497019 KIF27Q86VH2 1401 aa26.77■■□□□ 1.88
NTRK1-205ENST00000497019 CUX2O14529 1486 aa26.77■■□□□ 1.88
NTRK1-205ENST00000497019 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
NTRK1-205ENST00000497019 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
NTRK1-205ENST00000497019 SUPT16HQ9Y5B9 1047 aaKnown RBP26.67■■□□□ 1.86
NTRK1-205ENST00000497019 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
NTRK1-205ENST00000497019 CCNB3Q8WWL7 1395 aa26.67■■□□□ 1.86
NTRK1-205ENST00000497019 CFTRP13569 1480 aa26.63■■□□□ 1.85
NTRK1-205ENST00000497019 MAP3K1Q13233 1512 aa26.5■■□□□ 1.83
NTRK1-205ENST00000497019 IGF1RP08069 1367 aa26.47■■□□□ 1.83
NTRK1-205ENST00000497019 RAB3GAP2Q9H2M9 1393 aa26.46■■□□□ 1.83
NTRK1-205ENST00000497019 MAPKBP1O60336 1514 aa26.44■■□□□ 1.82
NTRK1-205ENST00000497019 TIAM1Q13009 1591 aa26.44■■□□□ 1.82
NTRK1-205ENST00000497019 ITGAEP38570 1179 aa26.43■■□□□ 1.82
NTRK1-205ENST00000497019 TSHZ2Q9NRE2 1034 aa26.39■■□□□ 1.82
NTRK1-205ENST00000497019 SETD5Q9C0A6 1442 aa26.36■■□□□ 1.81
NTRK1-205ENST00000497019 LRRC9Q6ZRR7 1453 aa26.35■■□□□ 1.81
NTRK1-205ENST00000497019 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
NTRK1-205ENST00000497019 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms