RNA–Protein interactions for RNA: ENST00000496991.3

TTC7A-212, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 3

Gene TTC7A, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-212ENST00000496991 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
TTC7A-212ENST00000496991 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
TTC7A-212ENST00000496991 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
TTC7A-212ENST00000496991 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
TTC7A-212ENST00000496991 NISCHQ9Y2I1 1504 aa17.98■□□□□ 0.47
TTC7A-212ENST00000496991 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
TTC7A-212ENST00000496991 FOXD1Q16676 465 aa16.75■□□□□ 0.27
TTC7A-212ENST00000496991 ADRA2BP18089 450 aa16.63■□□□□ 0.25
TTC7A-212ENST00000496991 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
TTC7A-212ENST00000496991 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.16
TTC7A-212ENST00000496991 KCNA4P22459 653 aa15.98■□□□□ 0.15
TTC7A-212ENST00000496991 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
TTC7A-212ENST00000496991 ABCC9O60706 1549 aa15.82■□□□□ 0.12
TTC7A-212ENST00000496991 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
TTC7A-212ENST00000496991 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
TTC7A-212ENST00000496991 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
TTC7A-212ENST00000496991 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
TTC7A-212ENST00000496991 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
TTC7A-212ENST00000496991 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
TTC7A-212ENST00000496991 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
TTC7A-212ENST00000496991 MSH5O43196 834 aa15.11■□□□□ 0.01
TTC7A-212ENST00000496991 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
TTC7A-212ENST00000496991 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
TTC7A-212ENST00000496991 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
TTC7A-212ENST00000496991 NACADO15069 1562 aa14.98□□□□□ -0.01
TTC7A-212ENST00000496991 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
TTC7A-212ENST00000496991 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
TTC7A-212ENST00000496991 DCAF1Q9Y4B6 1507 aa14.95□□□□□ -0.02
TTC7A-212ENST00000496991 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
TTC7A-212ENST00000496991 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
TTC7A-212ENST00000496991 ZBTB22O15209 634 aa14.75□□□□□ -0.05
TTC7A-212ENST00000496991 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
TTC7A-212ENST00000496991 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
TTC7A-212ENST00000496991 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
TTC7A-212ENST00000496991 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
TTC7A-212ENST00000496991 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
TTC7A-212ENST00000496991 BICRAQ9NZM4 1560 aa14.49□□□□□ -0.09
TTC7A-212ENST00000496991 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
TTC7A-212ENST00000496991 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
TTC7A-212ENST00000496991 SHROOM4Q9ULL8 1493 aa14.42□□□□□ -0.1
TTC7A-212ENST00000496991 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
TTC7A-212ENST00000496991 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
TTC7A-212ENST00000496991 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
TTC7A-212ENST00000496991 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
TTC7A-212ENST00000496991 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
TTC7A-212ENST00000496991 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
TTC7A-212ENST00000496991 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
TTC7A-212ENST00000496991 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
TTC7A-212ENST00000496991 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
TTC7A-212ENST00000496991 SMARCA2P51531 1590 aa13.85□□□□□ -0.19
TTC7A-212ENST00000496991 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.2
TTC7A-212ENST00000496991 PEG3Q9GZU2 1588 aa13.83□□□□□ -0.2
TTC7A-212ENST00000496991 DCAF8L1A6NGE4 600 aa13.81□□□□□ -0.2
TTC7A-212ENST00000496991 CUX2O14529 1486 aa13.8□□□□□ -0.2
TTC7A-212ENST00000496991 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
TTC7A-212ENST00000496991 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
TTC7A-212ENST00000496991 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
TTC7A-212ENST00000496991 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
TTC7A-212ENST00000496991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
TTC7A-212ENST00000496991 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
TTC7A-212ENST00000496991 WIZO95785 1651 aa13.72□□□□□ -0.21
TTC7A-212ENST00000496991 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
TTC7A-212ENST00000496991 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
TTC7A-212ENST00000496991 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
TTC7A-212ENST00000496991 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
TTC7A-212ENST00000496991 FKBP8Q14318 412 aa13.57□□□□□ -0.24
TTC7A-212ENST00000496991 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
TTC7A-212ENST00000496991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
TTC7A-212ENST00000496991 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
TTC7A-212ENST00000496991 NESP48681 1621 aa13.48□□□□□ -0.25
TTC7A-212ENST00000496991 SUPT5HO00267 1087 aaKnown RBP13.46□□□□□ -0.25
TTC7A-212ENST00000496991 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
TTC7A-212ENST00000496991 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
TTC7A-212ENST00000496991 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
TTC7A-212ENST00000496991 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
TTC7A-212ENST00000496991 CCDC88BA6NC98 1476 aa13.39□□□□□ -0.27
TTC7A-212ENST00000496991 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
TTC7A-212ENST00000496991 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
TTC7A-212ENST00000496991 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.28
TTC7A-212ENST00000496991 CFTRP13569 1480 aa13.32□□□□□ -0.28
TTC7A-212ENST00000496991 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
TTC7A-212ENST00000496991 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
TTC7A-212ENST00000496991 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
TTC7A-212ENST00000496991 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
TTC7A-212ENST00000496991 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
TTC7A-212ENST00000496991 APLP2Q06481 763 aa13.2□□□□□ -0.3
TTC7A-212ENST00000496991 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
TTC7A-212ENST00000496991 WDR62O43379 1518 aa13.18□□□□□ -0.3
TTC7A-212ENST00000496991 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
TTC7A-212ENST00000496991 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
TTC7A-212ENST00000496991 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
TTC7A-212ENST00000496991 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
TTC7A-212ENST00000496991 DNMBPQ6XZF7 1577 aa13.07□□□□□ -0.32
TTC7A-212ENST00000496991 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
TTC7A-212ENST00000496991 URB2Q14146 1524 aaKnown RBP13.05□□□□□ -0.32
TTC7A-212ENST00000496991 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
TTC7A-212ENST00000496991 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
TTC7A-212ENST00000496991 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
TTC7A-212ENST00000496991 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
TTC7A-212ENST00000496991 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms