RNA–Protein interactions for RNA: ENST00000496948.2

TMC2-202, Transcript of transmembrane channel like 2, humanhuman

TSL 2

Gene TMC2, Length 2,669 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC2-202ENST00000496948 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
TMC2-202ENST00000496948 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
TMC2-202ENST00000496948 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
TMC2-202ENST00000496948 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
TMC2-202ENST00000496948 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
TMC2-202ENST00000496948 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
TMC2-202ENST00000496948 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
TMC2-202ENST00000496948 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
TMC2-202ENST00000496948 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
TMC2-202ENST00000496948 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
TMC2-202ENST00000496948 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.08
TMC2-202ENST00000496948 DCAF1Q9Y4B6 1507 aa14.51□□□□□ -0.09
TMC2-202ENST00000496948 SENP3Q9H4L4 574 aaPredicted RBP14.26□□□□□ -0.13
TMC2-202ENST00000496948 LOC105371045A0A1W2PR82 267 aa14.26□□□□□ -0.13
TMC2-202ENST00000496948 PCGF6Q9BYE7 350 aa14.26□□□□□ -0.13
TMC2-202ENST00000496948 HRCP23327 699 aa14.22□□□□□ -0.13
TMC2-202ENST00000496948 SCRIBQ14160 1630 aa14.2□□□□□ -0.14
TMC2-202ENST00000496948 ABCC9O60706 1549 aa14.17□□□□□ -0.14
TMC2-202ENST00000496948 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
TMC2-202ENST00000496948 PPARGC1BQ86YN6 1023 aaKnown RBP14.01□□□□□ -0.17
TMC2-202ENST00000496948 TRIM41Q8WV44 630 aa14□□□□□ -0.17
TMC2-202ENST00000496948 FAM9AQ8IZU1 332 aaPredicted RBP13.97□□□□□ -0.17
TMC2-202ENST00000496948 RB1CC1Q8TDY2 1594 aa13.97□□□□□ -0.17
TMC2-202ENST00000496948 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
TMC2-202ENST00000496948 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
TMC2-202ENST00000496948 NACADO15069 1562 aa13.91□□□□□ -0.18
TMC2-202ENST00000496948 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
TMC2-202ENST00000496948 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
TMC2-202ENST00000496948 ADRA2BP18089 450 aa13.85□□□□□ -0.19
TMC2-202ENST00000496948 KCNA4P22459 653 aa13.77□□□□□ -0.2
TMC2-202ENST00000496948 WIZO95785 1651 aa13.77□□□□□ -0.21
TMC2-202ENST00000496948 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
TMC2-202ENST00000496948 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.24
TMC2-202ENST00000496948 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
TMC2-202ENST00000496948 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
TMC2-202ENST00000496948 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
TMC2-202ENST00000496948 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.24
TMC2-202ENST00000496948 TOP2AP11388 1531 aaKnown RBP13.52□□□□□ -0.24
TMC2-202ENST00000496948 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
TMC2-202ENST00000496948 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
TMC2-202ENST00000496948 SMARCA2P51531 1590 aa13.46□□□□□ -0.25
TMC2-202ENST00000496948 TTBK1Q5TCY1 1321 aaPredicted RBP13.45□□□□□ -0.26
TMC2-202ENST00000496948 SOGA1O94964 1423 aa13.43□□□□□ -0.26
TMC2-202ENST00000496948 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
TMC2-202ENST00000496948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
TMC2-202ENST00000496948 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
TMC2-202ENST00000496948 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
TMC2-202ENST00000496948 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
TMC2-202ENST00000496948 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
TMC2-202ENST00000496948 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
TMC2-202ENST00000496948 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
TMC2-202ENST00000496948 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
TMC2-202ENST00000496948 FOXD1Q16676 465 aa13.31□□□□□ -0.28
TMC2-202ENST00000496948 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
TMC2-202ENST00000496948 EEA1Q15075 1411 aa13.26□□□□□ -0.29
TMC2-202ENST00000496948 GOLGA3Q08378 1498 aa13.22□□□□□ -0.29
TMC2-202ENST00000496948 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.29
TMC2-202ENST00000496948 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
TMC2-202ENST00000496948 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
TMC2-202ENST00000496948 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
TMC2-202ENST00000496948 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
TMC2-202ENST00000496948 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
TMC2-202ENST00000496948 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
TMC2-202ENST00000496948 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
TMC2-202ENST00000496948 CLIP1P30622 1438 aa13.11□□□□□ -0.31
TMC2-202ENST00000496948 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
TMC2-202ENST00000496948 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
TMC2-202ENST00000496948 RAPGEF2Q9Y4G8 1499 aa13.08□□□□□ -0.32
TMC2-202ENST00000496948 KIF21BO75037 1637 aa13.06□□□□□ -0.32
TMC2-202ENST00000496948 APLP2Q06481 763 aa13.04□□□□□ -0.32
TMC2-202ENST00000496948 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.32
TMC2-202ENST00000496948 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
TMC2-202ENST00000496948 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
TMC2-202ENST00000496948 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
TMC2-202ENST00000496948 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
TMC2-202ENST00000496948 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
TMC2-202ENST00000496948 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
TMC2-202ENST00000496948 PRXQ9BXM0 1461 aa12.9□□□□□ -0.34
TMC2-202ENST00000496948 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.34
TMC2-202ENST00000496948 CUX1P39880 1505 aa12.89□□□□□ -0.35
TMC2-202ENST00000496948 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
TMC2-202ENST00000496948 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
TMC2-202ENST00000496948 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
TMC2-202ENST00000496948 HMGXB3Q12766 1538 aa12.87□□□□□ -0.35
TMC2-202ENST00000496948 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
TMC2-202ENST00000496948 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
TMC2-202ENST00000496948 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
TMC2-202ENST00000496948 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
TMC2-202ENST00000496948 MIER1Q8N108 512 aa12.84□□□□□ -0.35
TMC2-202ENST00000496948 CFTRP13569 1480 aa12.83□□□□□ -0.35
TMC2-202ENST00000496948 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
TMC2-202ENST00000496948 ZBTB22O15209 634 aa12.78□□□□□ -0.36
TMC2-202ENST00000496948 ITGAEP38570 1179 aa12.77□□□□□ -0.37
TMC2-202ENST00000496948 DHX57Q6P158 1386 aaKnown RBP12.77□□□□□ -0.37
TMC2-202ENST00000496948 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
TMC2-202ENST00000496948 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
TMC2-202ENST00000496948 CUX2O14529 1486 aa12.75□□□□□ -0.37
TMC2-202ENST00000496948 IGF1RP08069 1367 aa12.74□□□□□ -0.37
TMC2-202ENST00000496948 CADPSQ9ULU8 1353 aa12.72□□□□□ -0.37
TMC2-202ENST00000496948 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms