RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
KLF4-204ENST00000493306 SHROOM4Q9ULL8 1493 aa27.79■■■□□ 2.04
KLF4-204ENST00000493306 HRCP23327 699 aa27.67■■■□□ 2.02
KLF4-204ENST00000493306 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
KLF4-204ENST00000493306 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
KLF4-204ENST00000493306 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
KLF4-204ENST00000493306 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
KLF4-204ENST00000493306 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
KLF4-204ENST00000493306 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
KLF4-204ENST00000493306 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
KLF4-204ENST00000493306 CCDC180Q9P1Z9 1646 aa26.69■■□□□ 1.86
KLF4-204ENST00000493306 PELP1Q8IZL8 1130 aaKnown RBP26.57■■□□□ 1.84
KLF4-204ENST00000493306 TRIM26Q12899 539 aaPredicted RBP26.46■■□□□ 1.83
KLF4-204ENST00000493306 LOC105371045A0A1W2PR82 267 aa26.4■■□□□ 1.82
KLF4-204ENST00000493306 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
KLF4-204ENST00000493306 ZEB1P37275 1124 aaPredicted RBP26.26■■□□□ 1.79
KLF4-204ENST00000493306 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
KLF4-204ENST00000493306 MYT1Q01538 1121 aa25.9■■□□□ 1.74
KLF4-204ENST00000493306 ABCC9O60706 1549 aa25.71■■□□□ 1.71
KLF4-204ENST00000493306 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
KLF4-204ENST00000493306 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
KLF4-204ENST00000493306 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
KLF4-204ENST00000493306 ACIN1Q9UKV3 1341 aaKnown RBP25.48■■□□□ 1.67
KLF4-204ENST00000493306 RB1CC1Q8TDY2 1594 aa25.36■■□□□ 1.65
KLF4-204ENST00000493306 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
KLF4-204ENST00000493306 CENPBP07199 599 aaPredicted RBP25.3■■□□□ 1.64
KLF4-204ENST00000493306 EHMT2Q96KQ7 1210 aa25.29■■□□□ 1.64
KLF4-204ENST00000493306 CCER1Q8TC90 406 aaPredicted RBP25.28■■□□□ 1.64
KLF4-204ENST00000493306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
KLF4-204ENST00000493306 GTF3C3Q9Y5Q9 886 aa25.22■■□□□ 1.63
KLF4-204ENST00000493306 SCRIBQ14160 1630 aa25.21■■□□□ 1.63
KLF4-204ENST00000493306 DIEXFQ68CQ4 756 aaKnown RBP25.19■■□□□ 1.62
KLF4-204ENST00000493306 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
KLF4-204ENST00000493306 MROH2BQ7Z745 1585 aa24.79■■□□□ 1.56
KLF4-204ENST00000493306 CECR2Q9BXF3 1484 aa24.79■■□□□ 1.56
KLF4-204ENST00000493306 ZNF316A6NFI3 1004 aaPredicted RBP24.78■■□□□ 1.56
KLF4-204ENST00000493306 WIZO95785 1651 aa24.71■■□□□ 1.55
KLF4-204ENST00000493306 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.54
KLF4-204ENST00000493306 YTHDC1Q96MU7 727 aaKnown RBP24.66■■□□□ 1.54
KLF4-204ENST00000493306 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
KLF4-204ENST00000493306 CEP162Q5TB80 1403 aa24.65■■□□□ 1.54
KLF4-204ENST00000493306 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
KLF4-204ENST00000493306 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
KLF4-204ENST00000493306 NACADO15069 1562 aa24.52■■□□□ 1.52
KLF4-204ENST00000493306 MIER1Q8N108 512 aa24.5■■□□□ 1.51
KLF4-204ENST00000493306 CCDC88BA6NC98 1476 aa24.48■■□□□ 1.51
KLF4-204ENST00000493306 ABCC8Q09428 1581 aa24.45■■□□□ 1.51
KLF4-204ENST00000493306 EEA1Q15075 1411 aa24.4■■□□□ 1.5
KLF4-204ENST00000493306 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
KLF4-204ENST00000493306 SOGA1O94964 1423 aa24.36■■□□□ 1.49
KLF4-204ENST00000493306 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
KLF4-204ENST00000493306 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
KLF4-204ENST00000493306 GOLGA3Q08378 1498 aa24.28■■□□□ 1.48
KLF4-204ENST00000493306 CLSPNQ9HAW4 1339 aa24.28■■□□□ 1.48
KLF4-204ENST00000493306 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
KLF4-204ENST00000493306 SMARCA2P51531 1590 aa24.21■■□□□ 1.47
KLF4-204ENST00000493306 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
KLF4-204ENST00000493306 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
KLF4-204ENST00000493306 SUPT16HQ9Y5B9 1047 aaKnown RBP24.09■■□□□ 1.45
KLF4-204ENST00000493306 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
KLF4-204ENST00000493306 APLP2Q06481 763 aa24.05■■□□□ 1.44
KLF4-204ENST00000493306 CLIP1P30622 1438 aa24.04■■□□□ 1.44
KLF4-204ENST00000493306 VPS8Q8N3P4 1428 aa24.03■■□□□ 1.44
KLF4-204ENST00000493306 KIF21BO75037 1637 aa24.01■■□□□ 1.43
KLF4-204ENST00000493306 TSHZ2Q9NRE2 1034 aa23.9■■□□□ 1.42
KLF4-204ENST00000493306 ANP32EQ9BTT0 268 aa23.9■■□□□ 1.42
KLF4-204ENST00000493306 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
KLF4-204ENST00000493306 DHX57Q6P158 1386 aaKnown RBP23.86■■□□□ 1.41
KLF4-204ENST00000493306 BCL11AQ9H165 835 aa23.83■■□□□ 1.41
KLF4-204ENST00000493306 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
KLF4-204ENST00000493306 RAPGEF2Q9Y4G8 1499 aa23.75■■□□□ 1.39
KLF4-204ENST00000493306 RANGAP1P46060 587 aaPredicted RBP23.69■■□□□ 1.38
KLF4-204ENST00000493306 UNC13AQ9UPW8 1703 aa23.63■■□□□ 1.37
KLF4-204ENST00000493306 PRKCSHP14314 528 aaPredicted RBP23.61■■□□□ 1.37
KLF4-204ENST00000493306 RRBP1Q9P2E9 1410 aaKnown RBP23.56■■□□□ 1.36
KLF4-204ENST00000493306 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
KLF4-204ENST00000493306 CUX2O14529 1486 aa23.54■■□□□ 1.36
KLF4-204ENST00000493306 BCANQ96GW7 911 aa23.54■■□□□ 1.36
KLF4-204ENST00000493306 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
KLF4-204ENST00000493306 FKBP8Q14318 412 aa23.51■■□□□ 1.35
KLF4-204ENST00000493306 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
KLF4-204ENST00000493306 KCNH8Q96L42 1107 aa23.51■■□□□ 1.35
KLF4-204ENST00000493306 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
KLF4-204ENST00000493306 NEFLP07196 543 aa23.45■■□□□ 1.34
KLF4-204ENST00000493306 CCNB3Q8WWL7 1395 aa23.45■■□□□ 1.34
KLF4-204ENST00000493306 TOP2BQ02880 1626 aa23.43■■□□□ 1.34
KLF4-204ENST00000493306 PRXQ9BXM0 1461 aa23.4■■□□□ 1.34
KLF4-204ENST00000493306 RBM19Q9Y4C8 960 aaKnown RBP23.38■■□□□ 1.33
KLF4-204ENST00000493306 ITGAEP38570 1179 aa23.35■■□□□ 1.33
KLF4-204ENST00000493306 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.33
KLF4-204ENST00000493306 RAB3GAP2Q9H2M9 1393 aa23.33■■□□□ 1.33
KLF4-204ENST00000493306 MAPKBP1O60336 1514 aa23.33■■□□□ 1.33
KLF4-204ENST00000493306 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
KLF4-204ENST00000493306 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
KLF4-204ENST00000493306 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
KLF4-204ENST00000493306 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
KLF4-204ENST00000493306 ERICH6Q7L0X2 663 aa23.24■■□□□ 1.31
KLF4-204ENST00000493306 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
KLF4-204ENST00000493306 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
KLF4-204ENST00000493306 PPP1R15AO75807 674 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms