RNA–Protein interactions for RNA: ENST00000492294.5

PNISR-209, Transcript of PNN interacting serine and arginine rich protein, humanhuman

TSL 3

Gene PNISR, Length 652 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNISR-209ENST00000492294 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
PNISR-209ENST00000492294 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
PNISR-209ENST00000492294 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
PNISR-209ENST00000492294 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
PNISR-209ENST00000492294 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
PNISR-209ENST00000492294 FOXD1Q16676 465 aa15.96■□□□□ 0.15
PNISR-209ENST00000492294 ADRA2BP18089 450 aa15.59■□□□□ 0.09
PNISR-209ENST00000492294 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
PNISR-209ENST00000492294 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
PNISR-209ENST00000492294 PIAS4Q8N2W9 510 aaPredicted RBP15.03■□□□□ -0
PNISR-209ENST00000492294 MSH5O43196 834 aa15.02■□□□□ -0
PNISR-209ENST00000492294 KCNA4P22459 653 aa14.99□□□□□ -0.01
PNISR-209ENST00000492294 ABCC9O60706 1549 aa14.92□□□□□ -0.02
PNISR-209ENST00000492294 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
PNISR-209ENST00000492294 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
PNISR-209ENST00000492294 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
PNISR-209ENST00000492294 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
PNISR-209ENST00000492294 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
PNISR-209ENST00000492294 CCDC180Q9P1Z9 1646 aa14.3□□□□□ -0.12
PNISR-209ENST00000492294 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
PNISR-209ENST00000492294 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
PNISR-209ENST00000492294 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
PNISR-209ENST00000492294 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
PNISR-209ENST00000492294 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.14
PNISR-209ENST00000492294 DNAJC5Q9H3Z4 198 aa14□□□□□ -0.17
PNISR-209ENST00000492294 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
PNISR-209ENST00000492294 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
PNISR-209ENST00000492294 ZBTB22O15209 634 aa13.81□□□□□ -0.2
PNISR-209ENST00000492294 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
PNISR-209ENST00000492294 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
PNISR-209ENST00000492294 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
PNISR-209ENST00000492294 NACADO15069 1562 aa13.65□□□□□ -0.22
PNISR-209ENST00000492294 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
PNISR-209ENST00000492294 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
PNISR-209ENST00000492294 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
PNISR-209ENST00000492294 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
PNISR-209ENST00000492294 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
PNISR-209ENST00000492294 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
PNISR-209ENST00000492294 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
PNISR-209ENST00000492294 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
PNISR-209ENST00000492294 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
PNISR-209ENST00000492294 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
PNISR-209ENST00000492294 MYO15BQ96JP2 1530 aa13.24□□□□□ -0.29
PNISR-209ENST00000492294 CUX2O14529 1486 aa13.23□□□□□ -0.29
PNISR-209ENST00000492294 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
PNISR-209ENST00000492294 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
PNISR-209ENST00000492294 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
PNISR-209ENST00000492294 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
PNISR-209ENST00000492294 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
PNISR-209ENST00000492294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.341e-9■■■□□ 15.1
PNISR-209ENST00000492294 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
PNISR-209ENST00000492294 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
PNISR-209ENST00000492294 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
PNISR-209ENST00000492294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
PNISR-209ENST00000492294 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
PNISR-209ENST00000492294 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
PNISR-209ENST00000492294 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
PNISR-209ENST00000492294 FKBP8Q14318 412 aa12.75□□□□□ -0.37
PNISR-209ENST00000492294 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
PNISR-209ENST00000492294 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
PNISR-209ENST00000492294 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
PNISR-209ENST00000492294 ZCCHC6Q5VYS8 1495 aaKnown RBP12.69□□□□□ -0.38
PNISR-209ENST00000492294 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
PNISR-209ENST00000492294 NESP48681 1621 aa12.59□□□□□ -0.39
PNISR-209ENST00000492294 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
PNISR-209ENST00000492294 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
PNISR-209ENST00000492294 APLP2Q06481 763 aa12.53□□□□□ -0.4
PNISR-209ENST00000492294 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
PNISR-209ENST00000492294 SMARCA2P51531 1590 aa12.52□□□□□ -0.4
PNISR-209ENST00000492294 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
PNISR-209ENST00000492294 BAZ1AQ9NRL2 1556 aaPredicted RBP12.51□□□□□ -0.41
PNISR-209ENST00000492294 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
PNISR-209ENST00000492294 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
PNISR-209ENST00000492294 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
PNISR-209ENST00000492294 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
PNISR-209ENST00000492294 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
PNISR-209ENST00000492294 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
PNISR-209ENST00000492294 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
PNISR-209ENST00000492294 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
PNISR-209ENST00000492294 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
PNISR-209ENST00000492294 WDR62O43379 1518 aa12.34□□□□□ -0.43
PNISR-209ENST00000492294 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
PNISR-209ENST00000492294 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
PNISR-209ENST00000492294 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
PNISR-209ENST00000492294 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
PNISR-209ENST00000492294 ARHGEF11O15085 1522 aa12.28□□□□□ -0.44
PNISR-209ENST00000492294 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
PNISR-209ENST00000492294 SMARCA4P51532 1647 aa12.26□□□□□ -0.45
PNISR-209ENST00000492294 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
PNISR-209ENST00000492294 CAPN15O75808 1086 aa12.22□□□□□ -0.45
PNISR-209ENST00000492294 POLA2Q14181 598 aa12.21□□□□□ -0.45
PNISR-209ENST00000492294 FBLN2P98095 1184 aa12.2□□□□□ -0.46
PNISR-209ENST00000492294 PEG3Q9GZU2 1588 aa12.17□□□□□ -0.46
PNISR-209ENST00000492294 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
PNISR-209ENST00000492294 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
PNISR-209ENST00000492294 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
PNISR-209ENST00000492294 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
PNISR-209ENST00000492294 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
PNISR-209ENST00000492294 PROM2Q8N271 834 aa12.11□□□□□ -0.47
PNISR-209ENST00000492294 ARAP1Q96P48 1450 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms