RNA–Protein interactions for RNA: ENST00000491786.5

TTC7A-211, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 3,615 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-211ENST00000491786 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.39
TTC7A-211ENST00000491786 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
TTC7A-211ENST00000491786 DCAF8L2P0C7V8 631 aa20.33■□□□□ 0.85
TTC7A-211ENST00000491786 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
TTC7A-211ENST00000491786 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
TTC7A-211ENST00000491786 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
TTC7A-211ENST00000491786 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
TTC7A-211ENST00000491786 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
TTC7A-211ENST00000491786 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
TTC7A-211ENST00000491786 HRCP23327 699 aa19.16■□□□□ 0.66
TTC7A-211ENST00000491786 MYT1Q01538 1121 aa19.14■□□□□ 0.65
TTC7A-211ENST00000491786 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
TTC7A-211ENST00000491786 ABCC9O60706 1549 aa19.04■□□□□ 0.64
TTC7A-211ENST00000491786 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
TTC7A-211ENST00000491786 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
TTC7A-211ENST00000491786 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
TTC7A-211ENST00000491786 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
TTC7A-211ENST00000491786 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
TTC7A-211ENST00000491786 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
TTC7A-211ENST00000491786 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
TTC7A-211ENST00000491786 NACADO15069 1562 aa18.69■□□□□ 0.58
TTC7A-211ENST00000491786 EHMT2Q96KQ7 1210 aa18.68■□□□□ 0.58
TTC7A-211ENST00000491786 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
TTC7A-211ENST00000491786 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
TTC7A-211ENST00000491786 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
TTC7A-211ENST00000491786 MROH2BQ7Z745 1585 aa18.45■□□□□ 0.54
TTC7A-211ENST00000491786 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
TTC7A-211ENST00000491786 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
TTC7A-211ENST00000491786 WIZO95785 1651 aa18.3■□□□□ 0.52
TTC7A-211ENST00000491786 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
TTC7A-211ENST00000491786 TTBK1Q5TCY1 1321 aaPredicted RBP18.21■□□□□ 0.51
TTC7A-211ENST00000491786 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
TTC7A-211ENST00000491786 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
TTC7A-211ENST00000491786 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
TTC7A-211ENST00000491786 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
TTC7A-211ENST00000491786 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
TTC7A-211ENST00000491786 PRKCSHP14314 528 aaPredicted RBP17.98■□□□□ 0.47
TTC7A-211ENST00000491786 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
TTC7A-211ENST00000491786 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
TTC7A-211ENST00000491786 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
TTC7A-211ENST00000491786 ACIN1Q9UKV3 1341 aaKnown RBP17.89■□□□□ 0.45
TTC7A-211ENST00000491786 UNC13AQ9UPW8 1703 aa17.88■□□□□ 0.45
TTC7A-211ENST00000491786 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
TTC7A-211ENST00000491786 NEUROD1Q13562 356 aa17.85■□□□□ 0.45
TTC7A-211ENST00000491786 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
TTC7A-211ENST00000491786 SOGA1O94964 1423 aa17.83■□□□□ 0.44
TTC7A-211ENST00000491786 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
TTC7A-211ENST00000491786 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
TTC7A-211ENST00000491786 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
TTC7A-211ENST00000491786 RANGAP1P46060 587 aaPredicted RBP17.78■□□□□ 0.44
TTC7A-211ENST00000491786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.78■□□□□ 0.44
TTC7A-211ENST00000491786 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
TTC7A-211ENST00000491786 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
TTC7A-211ENST00000491786 BAZ1BQ9UIG0 1483 aaKnown RBP17.74■□□□□ 0.43
TTC7A-211ENST00000491786 EEA1Q15075 1411 aa17.71■□□□□ 0.43
TTC7A-211ENST00000491786 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
TTC7A-211ENST00000491786 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
TTC7A-211ENST00000491786 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
TTC7A-211ENST00000491786 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
TTC7A-211ENST00000491786 APLP2Q06481 763 aa17.66■□□□□ 0.42
TTC7A-211ENST00000491786 GOLGA3Q08378 1498 aa17.62■□□□□ 0.41
TTC7A-211ENST00000491786 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
TTC7A-211ENST00000491786 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.4
TTC7A-211ENST00000491786 HNRNPUL2Q1KMD3 747 aaKnown RBP17.51■□□□□ 0.39
TTC7A-211ENST00000491786 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
TTC7A-211ENST00000491786 CLIP1P30622 1438 aa17.49■□□□□ 0.39
TTC7A-211ENST00000491786 ERICH6Q7L0X2 663 aa17.39■□□□□ 0.37
TTC7A-211ENST00000491786 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
TTC7A-211ENST00000491786 ANP32EQ9BTT0 268 aa17.35■□□□□ 0.37
TTC7A-211ENST00000491786 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
TTC7A-211ENST00000491786 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
TTC7A-211ENST00000491786 KIF21BO75037 1637 aa17.31■□□□□ 0.36
TTC7A-211ENST00000491786 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
TTC7A-211ENST00000491786 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
TTC7A-211ENST00000491786 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
TTC7A-211ENST00000491786 HMGXB3Q12766 1538 aa17.24■□□□□ 0.35
TTC7A-211ENST00000491786 ITGAEP38570 1179 aa17.18■□□□□ 0.34
TTC7A-211ENST00000491786 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
TTC7A-211ENST00000491786 CUX1P39880 1505 aa17.17■□□□□ 0.34
TTC7A-211ENST00000491786 CFTRP13569 1480 aa17.17■□□□□ 0.34
TTC7A-211ENST00000491786 ZNF316A6NFI3 1004 aaPredicted RBP17.16■□□□□ 0.34
TTC7A-211ENST00000491786 CUX2O14529 1486 aa17.13■□□□□ 0.33
TTC7A-211ENST00000491786 PRXQ9BXM0 1461 aa17.13■□□□□ 0.33
TTC7A-211ENST00000491786 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
TTC7A-211ENST00000491786 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
TTC7A-211ENST00000491786 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
TTC7A-211ENST00000491786 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
TTC7A-211ENST00000491786 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
TTC7A-211ENST00000491786 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
TTC7A-211ENST00000491786 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
TTC7A-211ENST00000491786 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.32
TTC7A-211ENST00000491786 IGF1RP08069 1367 aa17■□□□□ 0.31
TTC7A-211ENST00000491786 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
TTC7A-211ENST00000491786 FAM50AQ14320 339 aaKnown RBP16.96■□□□□ 0.31
TTC7A-211ENST00000491786 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
TTC7A-211ENST00000491786 FANCD2Q9BXW9 1451 aa16.94■□□□□ 0.3
TTC7A-211ENST00000491786 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
TTC7A-211ENST00000491786 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
TTC7A-211ENST00000491786 CCNB3Q8WWL7 1395 aa16.92■□□□□ 0.3
TTC7A-211ENST00000491786 MIER1Q8N108 512 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms