RNA–Protein interactions for RNA: ENST00000491755.5

CCDC17-207, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 2,527 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-207ENST00000491755 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
CCDC17-207ENST00000491755 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
CCDC17-207ENST00000491755 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
CCDC17-207ENST00000491755 HRCP23327 699 aa31.75■■■□□ 2.67
CCDC17-207ENST00000491755 MYO15BQ96JP2 1530 aa31.42■■■□□ 2.62
CCDC17-207ENST00000491755 PCGF6Q9BYE7 350 aa31.33■■■□□ 2.61
CCDC17-207ENST00000491755 CHIC1Q5VXU3 224 aa31.32■■■□□ 2.6
CCDC17-207ENST00000491755 PPARGC1BQ86YN6 1023 aaKnown RBP31.19■■■□□ 2.58
CCDC17-207ENST00000491755 ZCCHC6Q5VYS8 1495 aaKnown RBP31.02■■■□□ 2.56
CCDC17-207ENST00000491755 LOC105371045A0A1W2PR82 267 aa30.62■■■□□ 2.49
CCDC17-207ENST00000491755 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
CCDC17-207ENST00000491755 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
CCDC17-207ENST00000491755 CCDC180Q9P1Z9 1646 aa30.44■■■□□ 2.46
CCDC17-207ENST00000491755 TRIM26Q12899 539 aaPredicted RBP30.36■■■□□ 2.45
CCDC17-207ENST00000491755 PELP1Q8IZL8 1130 aaKnown RBP30.01■■■□□ 2.4
CCDC17-207ENST00000491755 ZEB1P37275 1124 aaPredicted RBP29.95■■■□□ 2.39
CCDC17-207ENST00000491755 SCAF1Q9H7N4 1312 aaKnown RBP29.88■■■□□ 2.37
CCDC17-207ENST00000491755 FAM9AQ8IZU1 332 aaPredicted RBP29.58■■■□□ 2.33
CCDC17-207ENST00000491755 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
CCDC17-207ENST00000491755 EHMT2Q96KQ7 1210 aa29.48■■■□□ 2.31
CCDC17-207ENST00000491755 ABCC9O60706 1549 aa29.4■■■□□ 2.3
CCDC17-207ENST00000491755 RSF1Q96T23 1441 aaPredicted RBP29.33■■■□□ 2.29
CCDC17-207ENST00000491755 ACIN1Q9UKV3 1341 aaKnown RBP29.23■■■□□ 2.27
CCDC17-207ENST00000491755 NEUROD1Q13562 356 aa29.2■■■□□ 2.27
CCDC17-207ENST00000491755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.16■■■□□ 2.26
CCDC17-207ENST00000491755 RB1CC1Q8TDY2 1594 aa29.16■■■□□ 2.26
CCDC17-207ENST00000491755 CCER1Q8TC90 406 aaPredicted RBP29.07■■■□□ 2.24
CCDC17-207ENST00000491755 SCRIBQ14160 1630 aa29.03■■■□□ 2.24
CCDC17-207ENST00000491755 GTF3C3Q9Y5Q9 886 aa29■■■□□ 2.23
CCDC17-207ENST00000491755 DIEXFQ68CQ4 756 aaKnown RBP28.94■■■□□ 2.22
CCDC17-207ENST00000491755 CENPBP07199 599 aaPredicted RBP28.88■■■□□ 2.21
CCDC17-207ENST00000491755 TTBK1Q5TCY1 1321 aaPredicted RBP28.71■■■□□ 2.19
CCDC17-207ENST00000491755 MYT1Q01538 1121 aa28.69■■■□□ 2.18
CCDC17-207ENST00000491755 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
CCDC17-207ENST00000491755 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
CCDC17-207ENST00000491755 YTHDC1Q96MU7 727 aaKnown RBP28.47■■■□□ 2.15
CCDC17-207ENST00000491755 WIZO95785 1651 aa28.46■■■□□ 2.15
CCDC17-207ENST00000491755 ZNF316A6NFI3 1004 aaPredicted RBP28.45■■■□□ 2.15
CCDC17-207ENST00000491755 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
CCDC17-207ENST00000491755 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
CCDC17-207ENST00000491755 MIER1Q8N108 512 aa28.26■■■□□ 2.11
CCDC17-207ENST00000491755 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
CCDC17-207ENST00000491755 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
CCDC17-207ENST00000491755 ABCC8Q09428 1581 aa28.2■■■□□ 2.1
CCDC17-207ENST00000491755 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
CCDC17-207ENST00000491755 TNIKQ9UKE5 1360 aa28.13■■■□□ 2.09
CCDC17-207ENST00000491755 SOGA1O94964 1423 aa28.12■■■□□ 2.09
CCDC17-207ENST00000491755 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
CCDC17-207ENST00000491755 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
CCDC17-207ENST00000491755 NACADO15069 1562 aa28.05■■■□□ 2.08
CCDC17-207ENST00000491755 CSRNP3Q8WYN3 585 aa28.02■■■□□ 2.08
CCDC17-207ENST00000491755 RUSC2Q8N2Y8 1516 aa27.98■■■□□ 2.07
CCDC17-207ENST00000491755 TOP2AP11388 1531 aaKnown RBP27.85■■■□□ 2.05
CCDC17-207ENST00000491755 EEA1Q15075 1411 aa27.83■■■□□ 2.05
CCDC17-207ENST00000491755 GOLGA3Q08378 1498 aa27.8■■■□□ 2.04
CCDC17-207ENST00000491755 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
CCDC17-207ENST00000491755 SUPT16HQ9Y5B9 1047 aaKnown RBP27.67■■■□□ 2.02
CCDC17-207ENST00000491755 SMARCA4P51532 1647 aa27.64■■■□□ 2.01
CCDC17-207ENST00000491755 CLIP1P30622 1438 aa27.6■■■□□ 2.01
CCDC17-207ENST00000491755 APLP2Q06481 763 aa27.6■■■□□ 2.01
CCDC17-207ENST00000491755 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
CCDC17-207ENST00000491755 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
CCDC17-207ENST00000491755 VPS8Q8N3P4 1428 aa27.52■■■□□ 2
CCDC17-207ENST00000491755 CLSPNQ9HAW4 1339 aa27.51■■□□□ 1.99
CCDC17-207ENST00000491755 TSHZ2Q9NRE2 1034 aa27.46■■□□□ 1.99
CCDC17-207ENST00000491755 KIF21BO75037 1637 aa27.42■■□□□ 1.98
CCDC17-207ENST00000491755 DHX57Q6P158 1386 aaKnown RBP27.41■■□□□ 1.98
CCDC17-207ENST00000491755 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
CCDC17-207ENST00000491755 RAPGEF2Q9Y4G8 1499 aa27.34■■□□□ 1.97
CCDC17-207ENST00000491755 ANP32EQ9BTT0 268 aa27.33■■□□□ 1.97
CCDC17-207ENST00000491755 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
CCDC17-207ENST00000491755 KCNH8Q96L42 1107 aa27.25■■□□□ 1.95
CCDC17-207ENST00000491755 KANK4Q5T7N3 995 aaPredicted RBP27.19■■□□□ 1.94
CCDC17-207ENST00000491755 BCANQ96GW7 911 aa27.19■■□□□ 1.94
CCDC17-207ENST00000491755 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
CCDC17-207ENST00000491755 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
CCDC17-207ENST00000491755 ITGAEP38570 1179 aa27.05■■□□□ 1.92
CCDC17-207ENST00000491755 FKBP8Q14318 412 aa27.05■■□□□ 1.92
CCDC17-207ENST00000491755 BCL11AQ9H165 835 aa27.03■■□□□ 1.92
CCDC17-207ENST00000491755 ARAP1Q96P48 1450 aa27.02■■□□□ 1.92
CCDC17-207ENST00000491755 RRBP1Q9P2E9 1410 aaKnown RBP26.98■■□□□ 1.91
CCDC17-207ENST00000491755 DDX10Q13206 875 aaKnown RBP26.92■■□□□ 1.9
CCDC17-207ENST00000491755 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
CCDC17-207ENST00000491755 CCNB3Q8WWL7 1395 aa26.9■■□□□ 1.9
CCDC17-207ENST00000491755 CUX2O14529 1486 aa26.9■■□□□ 1.9
CCDC17-207ENST00000491755 RBM19Q9Y4C8 960 aaKnown RBP26.86■■□□□ 1.89
CCDC17-207ENST00000491755 PRXQ9BXM0 1461 aa26.85■■□□□ 1.89
CCDC17-207ENST00000491755 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
CCDC17-207ENST00000491755 RAB3GAP2Q9H2M9 1393 aa26.83■■□□□ 1.89
CCDC17-207ENST00000491755 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
CCDC17-207ENST00000491755 MAPKBP1O60336 1514 aa26.79■■□□□ 1.88
CCDC17-207ENST00000491755 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
CCDC17-207ENST00000491755 NEFLP07196 543 aa26.79■■□□□ 1.88
CCDC17-207ENST00000491755 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
CCDC17-207ENST00000491755 TRIM52Q96A61 297 aa26.76■■□□□ 1.87
CCDC17-207ENST00000491755 SIN3AQ96ST3 1273 aa26.76■■□□□ 1.87
CCDC17-207ENST00000491755 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
CCDC17-207ENST00000491755 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
CCDC17-207ENST00000491755 PPP1R15AO75807 674 aaPredicted RBP26.72■■□□□ 1.87
CCDC17-207ENST00000491755 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms