RNA–Protein interactions for RNA: ENST00000489856.1

CAV1-208, Transcript of caveolin 1, humanhuman

TSL 2

Gene CAV1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-208ENST00000489856 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
CAV1-208ENST00000489856 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
CAV1-208ENST00000489856 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
CAV1-208ENST00000489856 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
CAV1-208ENST00000489856 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
CAV1-208ENST00000489856 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
CAV1-208ENST00000489856 FOXD1Q16676 465 aa22.02■■□□□ 1.12
CAV1-208ENST00000489856 ADRA2BP18089 450 aa21.26■□□□□ 0.99
CAV1-208ENST00000489856 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
CAV1-208ENST00000489856 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
CAV1-208ENST00000489856 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
CAV1-208ENST00000489856 MSH5O43196 834 aa20.29■□□□□ 0.84
CAV1-208ENST00000489856 ABCC9O60706 1549 aa20.02■□□□□ 0.8
CAV1-208ENST00000489856 PPP4R3CPQ6ZMV5 832 aa19.69■□□□□ 0.74
CAV1-208ENST00000489856 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
CAV1-208ENST00000489856 KCNA4P22459 653 aa19.34■□□□□ 0.69
CAV1-208ENST00000489856 NACADO15069 1562 aa19.33■□□□□ 0.69
CAV1-208ENST00000489856 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.69
CAV1-208ENST00000489856 DCAF8L2P0C7V8 631 aa19.32■□□□□ 0.68
CAV1-208ENST00000489856 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
CAV1-208ENST00000489856 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
CAV1-208ENST00000489856 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
CAV1-208ENST00000489856 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
CAV1-208ENST00000489856 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
CAV1-208ENST00000489856 CNKSR2Q8WXI2 1034 aa19.12■□□□□ 0.65
CAV1-208ENST00000489856 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
CAV1-208ENST00000489856 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
CAV1-208ENST00000489856 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
CAV1-208ENST00000489856 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
CAV1-208ENST00000489856 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
CAV1-208ENST00000489856 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
CAV1-208ENST00000489856 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
CAV1-208ENST00000489856 HOXD11P31277 338 aaPredicted RBP18.61■□□□□ 0.57
CAV1-208ENST00000489856 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
CAV1-208ENST00000489856 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
CAV1-208ENST00000489856 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
CAV1-208ENST00000489856 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
CAV1-208ENST00000489856 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
CAV1-208ENST00000489856 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
CAV1-208ENST00000489856 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
CAV1-208ENST00000489856 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
CAV1-208ENST00000489856 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
CAV1-208ENST00000489856 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.46
CAV1-208ENST00000489856 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
CAV1-208ENST00000489856 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
CAV1-208ENST00000489856 SMARCA2P51531 1590 aa17.84■□□□□ 0.45
CAV1-208ENST00000489856 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
CAV1-208ENST00000489856 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
CAV1-208ENST00000489856 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
CAV1-208ENST00000489856 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
CAV1-208ENST00000489856 ZBTB22O15209 634 aa17.78■□□□□ 0.44
CAV1-208ENST00000489856 FOXD4L1Q9NU39 408 aa17.78■□□□□ 0.44
CAV1-208ENST00000489856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.44
CAV1-208ENST00000489856 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
CAV1-208ENST00000489856 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
CAV1-208ENST00000489856 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
CAV1-208ENST00000489856 RSF1Q96T23 1441 aaPredicted RBP17.68■□□□□ 0.42
CAV1-208ENST00000489856 WIZO95785 1651 aa17.64■□□□□ 0.41
CAV1-208ENST00000489856 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
CAV1-208ENST00000489856 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
CAV1-208ENST00000489856 U3KPZ7 1027 aaPredicted RBP17.47■□□□□ 0.39
CAV1-208ENST00000489856 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
CAV1-208ENST00000489856 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
CAV1-208ENST00000489856 NESP48681 1621 aa17.35■□□□□ 0.37
CAV1-208ENST00000489856 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
CAV1-208ENST00000489856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
CAV1-208ENST00000489856 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
CAV1-208ENST00000489856 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
CAV1-208ENST00000489856 CCDC88BA6NC98 1476 aa17.28■□□□□ 0.36
CAV1-208ENST00000489856 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
CAV1-208ENST00000489856 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
CAV1-208ENST00000489856 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
CAV1-208ENST00000489856 CFTRP13569 1480 aa17.23■□□□□ 0.35
CAV1-208ENST00000489856 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
CAV1-208ENST00000489856 ATXN8OSP0DMR3 200 aa17.15■□□□□ 0.34
CAV1-208ENST00000489856 KIF21AQ7Z4S6 1674 aa17.14■□□□□ 0.33
CAV1-208ENST00000489856 APLP2Q06481 763 aa17.11■□□□□ 0.33
CAV1-208ENST00000489856 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
CAV1-208ENST00000489856 PRDM2Q13029 1718 aa17.09■□□□□ 0.33
CAV1-208ENST00000489856 CUX2O14529 1486 aa17.08■□□□□ 0.32
CAV1-208ENST00000489856 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
CAV1-208ENST00000489856 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
CAV1-208ENST00000489856 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
CAV1-208ENST00000489856 ATF5Q9Y2D1 282 aaPredicted RBP16.99■□□□□ 0.31
CAV1-208ENST00000489856 WDR62O43379 1518 aa16.97■□□□□ 0.31
CAV1-208ENST00000489856 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
CAV1-208ENST00000489856 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
CAV1-208ENST00000489856 CAPN15O75808 1086 aa16.9■□□□□ 0.3
CAV1-208ENST00000489856 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
CAV1-208ENST00000489856 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
CAV1-208ENST00000489856 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
CAV1-208ENST00000489856 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
CAV1-208ENST00000489856 TOPBP1Q92547 1522 aa16.84■□□□□ 0.29
CAV1-208ENST00000489856 DNMBPQ6XZF7 1577 aa16.83■□□□□ 0.28
CAV1-208ENST00000489856 CUX1P39880 1505 aa16.74■□□□□ 0.27
CAV1-208ENST00000489856 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
CAV1-208ENST00000489856 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
CAV1-208ENST00000489856 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
CAV1-208ENST00000489856 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
CAV1-208ENST00000489856 SOGA1O94964 1423 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms