RNA–Protein interactions for RNA: ENST00000489630.5

VWA3B-217, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 2

Gene VWA3B, Length 2,575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-217ENST00000489630 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
VWA3B-217ENST00000489630 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
VWA3B-217ENST00000489630 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
VWA3B-217ENST00000489630 HRCP23327 699 aa17.2■□□□□ 0.34
VWA3B-217ENST00000489630 MYO15BQ96JP2 1530 aa17.18■□□□□ 0.34
VWA3B-217ENST00000489630 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
VWA3B-217ENST00000489630 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
VWA3B-217ENST00000489630 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
VWA3B-217ENST00000489630 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
VWA3B-217ENST00000489630 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
VWA3B-217ENST00000489630 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
VWA3B-217ENST00000489630 LOC105371045A0A1W2PR82 267 aa16.69■□□□□ 0.26
VWA3B-217ENST00000489630 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
VWA3B-217ENST00000489630 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
VWA3B-217ENST00000489630 ABCC9O60706 1549 aa16.24■□□□□ 0.19
VWA3B-217ENST00000489630 ZEB1P37275 1124 aaPredicted RBP16.23■□□□□ 0.19
VWA3B-217ENST00000489630 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
VWA3B-217ENST00000489630 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
VWA3B-217ENST00000489630 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
VWA3B-217ENST00000489630 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
VWA3B-217ENST00000489630 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
VWA3B-217ENST00000489630 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
VWA3B-217ENST00000489630 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
VWA3B-217ENST00000489630 SCRIBQ14160 1630 aa16.06■□□□□ 0.16
VWA3B-217ENST00000489630 MYT1Q01538 1121 aa16.04■□□□□ 0.16
VWA3B-217ENST00000489630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
VWA3B-217ENST00000489630 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
VWA3B-217ENST00000489630 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
VWA3B-217ENST00000489630 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
VWA3B-217ENST00000489630 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
VWA3B-217ENST00000489630 MROH2BQ7Z745 1585 aa15.76■□□□□ 0.11
VWA3B-217ENST00000489630 WIZO95785 1651 aa15.7■□□□□ 0.1
VWA3B-217ENST00000489630 DIEXFQ68CQ4 756 aaKnown RBP15.69■□□□□ 0.1
VWA3B-217ENST00000489630 TTBK1Q5TCY1 1321 aaPredicted RBP15.69■□□□□ 0.1
VWA3B-217ENST00000489630 GTF3C3Q9Y5Q9 886 aa15.67■□□□□ 0.1
VWA3B-217ENST00000489630 CENPBP07199 599 aaPredicted RBP15.61■□□□□ 0.09
VWA3B-217ENST00000489630 EIF4G1Q04637 1599 aaKnown RBP15.59■□□□□ 0.09
VWA3B-217ENST00000489630 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
VWA3B-217ENST00000489630 NACADO15069 1562 aa15.55■□□□□ 0.08
VWA3B-217ENST00000489630 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
VWA3B-217ENST00000489630 ABCC8Q09428 1581 aa15.52■□□□□ 0.08
VWA3B-217ENST00000489630 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.07
VWA3B-217ENST00000489630 CEP162Q5TB80 1403 aa15.52■□□□□ 0.07
VWA3B-217ENST00000489630 SOGA1O94964 1423 aa15.45■□□□□ 0.06
VWA3B-217ENST00000489630 ZNF316A6NFI3 1004 aaPredicted RBP15.44■□□□□ 0.06
VWA3B-217ENST00000489630 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
VWA3B-217ENST00000489630 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
VWA3B-217ENST00000489630 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
VWA3B-217ENST00000489630 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
VWA3B-217ENST00000489630 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
VWA3B-217ENST00000489630 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
VWA3B-217ENST00000489630 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
VWA3B-217ENST00000489630 MIER1Q8N108 512 aa15.33■□□□□ 0.05
VWA3B-217ENST00000489630 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
VWA3B-217ENST00000489630 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
VWA3B-217ENST00000489630 EEA1Q15075 1411 aa15.28■□□□□ 0.04
VWA3B-217ENST00000489630 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
VWA3B-217ENST00000489630 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
VWA3B-217ENST00000489630 PRKCSHP14314 528 aaPredicted RBP15.19■□□□□ 0.02
VWA3B-217ENST00000489630 CLIP1P30622 1438 aa15.14■□□□□ 0.01
VWA3B-217ENST00000489630 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
VWA3B-217ENST00000489630 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
VWA3B-217ENST00000489630 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
VWA3B-217ENST00000489630 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
VWA3B-217ENST00000489630 KIF21BO75037 1637 aa15.09■□□□□ 0.01
VWA3B-217ENST00000489630 APLP2Q06481 763 aa15.07■□□□□ 0
VWA3B-217ENST00000489630 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
VWA3B-217ENST00000489630 RAPGEF2Q9Y4G8 1499 aa15.04■□□□□ -0
VWA3B-217ENST00000489630 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
VWA3B-217ENST00000489630 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
VWA3B-217ENST00000489630 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
VWA3B-217ENST00000489630 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
VWA3B-217ENST00000489630 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
VWA3B-217ENST00000489630 CLSPNQ9HAW4 1339 aa14.91□□□□□ -0.02
VWA3B-217ENST00000489630 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
VWA3B-217ENST00000489630 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
VWA3B-217ENST00000489630 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
VWA3B-217ENST00000489630 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
VWA3B-217ENST00000489630 TSHZ2Q9NRE2 1034 aa14.84□□□□□ -0.03
VWA3B-217ENST00000489630 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.04
VWA3B-217ENST00000489630 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
VWA3B-217ENST00000489630 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
VWA3B-217ENST00000489630 ITGAEP38570 1179 aa14.79□□□□□ -0.04
VWA3B-217ENST00000489630 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
VWA3B-217ENST00000489630 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
VWA3B-217ENST00000489630 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
VWA3B-217ENST00000489630 CCNB3Q8WWL7 1395 aa14.74□□□□□ -0.05
VWA3B-217ENST00000489630 BCANQ96GW7 911 aa14.74□□□□□ -0.05
VWA3B-217ENST00000489630 CUX2O14529 1486 aa14.73□□□□□ -0.05
VWA3B-217ENST00000489630 BIVM-ERCC5R4GMW8 1640 aa14.72□□□□□ -0.05
VWA3B-217ENST00000489630 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.06
VWA3B-217ENST00000489630 RAB3GAP2Q9H2M9 1393 aa14.68□□□□□ -0.06
VWA3B-217ENST00000489630 MAPKBP1O60336 1514 aa14.68□□□□□ -0.06
VWA3B-217ENST00000489630 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
VWA3B-217ENST00000489630 FKBP8Q14318 412 aa14.65□□□□□ -0.06
VWA3B-217ENST00000489630 DDX10Q13206 875 aaKnown RBP14.65□□□□□ -0.06
VWA3B-217ENST00000489630 CUX1P39880 1505 aa14.64□□□□□ -0.07
VWA3B-217ENST00000489630 KIF27Q86VH2 1401 aa14.63□□□□□ -0.07
VWA3B-217ENST00000489630 SIN3AQ96ST3 1273 aa14.61□□□□□ -0.07
VWA3B-217ENST00000489630 WDR97A6NE52 1622 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms