RNA–Protein interactions for RNA: ENST00000489602.1

VEPH1-216, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 4

Gene VEPH1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-216ENST00000489602 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
VEPH1-216ENST00000489602 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
VEPH1-216ENST00000489602 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
VEPH1-216ENST00000489602 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
VEPH1-216ENST00000489602 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
VEPH1-216ENST00000489602 FOXD1Q16676 465 aa15.7■□□□□ 0.1
VEPH1-216ENST00000489602 MSH5O43196 834 aa14.99□□□□□ -0.01
VEPH1-216ENST00000489602 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
VEPH1-216ENST00000489602 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
VEPH1-216ENST00000489602 ADRA2BP18089 450 aa13.95□□□□□ -0.18
VEPH1-216ENST00000489602 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
VEPH1-216ENST00000489602 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
VEPH1-216ENST00000489602 NISCHQ9Y2I1 1504 aa13.32□□□□□ -0.28
VEPH1-216ENST00000489602 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
VEPH1-216ENST00000489602 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
VEPH1-216ENST00000489602 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
VEPH1-216ENST00000489602 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
VEPH1-216ENST00000489602 DCAF8L1A6NGE4 600 aa12.59□□□□□ -0.39
VEPH1-216ENST00000489602 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
VEPH1-216ENST00000489602 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
VEPH1-216ENST00000489602 POTEHQ6S545 545 aa12.37□□□□□ -0.43
VEPH1-216ENST00000489602 ABCC9O60706 1549 aa12.21□□□□□ -0.45
VEPH1-216ENST00000489602 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
VEPH1-216ENST00000489602 RNF216Q9NWF9 866 aaPredicted RBP12.04□□□□□ -0.48
VEPH1-216ENST00000489602 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
VEPH1-216ENST00000489602 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
VEPH1-216ENST00000489602 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
VEPH1-216ENST00000489602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
VEPH1-216ENST00000489602 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
VEPH1-216ENST00000489602 DSG3P32926 999 aa11.65□□□□□ -0.54
VEPH1-216ENST00000489602 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
VEPH1-216ENST00000489602 CAPN15O75808 1086 aa11.48□□□□□ -0.57
VEPH1-216ENST00000489602 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
VEPH1-216ENST00000489602 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
VEPH1-216ENST00000489602 RB1CC1Q8TDY2 1594 aa11.44□□□□□ -0.58
VEPH1-216ENST00000489602 NACADO15069 1562 aa11.28□□□□□ -0.6
VEPH1-216ENST00000489602 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
VEPH1-216ENST00000489602 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
VEPH1-216ENST00000489602 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
VEPH1-216ENST00000489602 UNC13AQ9UPW8 1703 aa11.17□□□□□ -0.62
VEPH1-216ENST00000489602 ABCB7O75027 752 aa11.16□□□□□ -0.62
VEPH1-216ENST00000489602 NPM3O75607 178 aaKnown RBP11.12□□□□□ -0.63
VEPH1-216ENST00000489602 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
VEPH1-216ENST00000489602 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
VEPH1-216ENST00000489602 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
VEPH1-216ENST00000489602 ZNF219Q9P2Y4 722 aaPredicted RBP11.07□□□□□ -0.64
VEPH1-216ENST00000489602 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
VEPH1-216ENST00000489602 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
VEPH1-216ENST00000489602 APLP2Q06481 763 aa10.98□□□□□ -0.65
VEPH1-216ENST00000489602 MYO15BQ96JP2 1530 aa10.96□□□□□ -0.65
VEPH1-216ENST00000489602 CECR2Q9BXF3 1484 aa10.94□□□□□ -0.66
VEPH1-216ENST00000489602 CC2D2AQ9P2K1 1620 aa10.92□□□□□ -0.66
VEPH1-216ENST00000489602 SLC4A2P04920 1241 aa10.85□□□□□ -0.67
VEPH1-216ENST00000489602 EIF4G1Q04637 1599 aaKnown RBP10.85□□□□□ -0.67
VEPH1-216ENST00000489602 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
VEPH1-216ENST00000489602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
VEPH1-216ENST00000489602 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
VEPH1-216ENST00000489602 PIP4P2Q8N4L2 257 aa10.77□□□□□ -0.69
VEPH1-216ENST00000489602 SHROOM4Q9ULL8 1493 aa10.76□□□□□ -0.69
VEPH1-216ENST00000489602 HAX1O00165 279 aa10.75□□□□□ -0.69
VEPH1-216ENST00000489602 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
VEPH1-216ENST00000489602 AKT1S1Q96B36 256 aa10.69□□□□□ -0.7
VEPH1-216ENST00000489602 POLA2Q14181 598 aa10.64□□□□□ -0.71
VEPH1-216ENST00000489602 EVX2Q03828 476 aa10.61□□□□□ -0.71
VEPH1-216ENST00000489602 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
VEPH1-216ENST00000489602 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
VEPH1-216ENST00000489602 ERCC6Q03468 1493 aa10.56□□□□□ -0.72
VEPH1-216ENST00000489602 DNAJC5Q9H3Z4 198 aa10.53□□□□□ -0.72
VEPH1-216ENST00000489602 LHX8Q68G74 356 aa10.51□□□□□ -0.73
VEPH1-216ENST00000489602 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
VEPH1-216ENST00000489602 PLSCR2Q9NRY7 297 aa10.48□□□□□ -0.73
VEPH1-216ENST00000489602 NESP48681 1621 aa10.46□□□□□ -0.74
VEPH1-216ENST00000489602 ATAD2BQ9ULI0 1458 aa10.44□□□□□ -0.74
VEPH1-216ENST00000489602 SMARCA4P51532 1647 aa10.42□□□□□ -0.74
VEPH1-216ENST00000489602 NCAPD3P42695 1498 aa10.42□□□□□ -0.74
VEPH1-216ENST00000489602 BAZ1BQ9UIG0 1483 aaKnown RBP10.4□□□□□ -0.74
VEPH1-216ENST00000489602 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
VEPH1-216ENST00000489602 CUX2O14529 1486 aa10.37□□□□□ -0.75
VEPH1-216ENST00000489602 OSCARQ8IYS5 282 aa10.35□□□□□ -0.75
VEPH1-216ENST00000489602 ZBTB12Q9Y330 459 aaPredicted RBP10.35□□□□□ -0.75
VEPH1-216ENST00000489602 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
VEPH1-216ENST00000489602 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
VEPH1-216ENST00000489602 HMGXB3Q12766 1538 aa10.32□□□□□ -0.76
VEPH1-216ENST00000489602 GABBR2O75899 941 aa10.31□□□□□ -0.76
VEPH1-216ENST00000489602 TRIM41Q8WV44 630 aa10.3□□□□□ -0.76
VEPH1-216ENST00000489602 C19orf67A6NJJ6 358 aa10.28□□□□□ -0.76
VEPH1-216ENST00000489602 MYCNP04198 464 aaPredicted RBP10.28□□□□□ -0.76
VEPH1-216ENST00000489602 KIF21AQ7Z4S6 1674 aa10.26□□□□□ -0.77
VEPH1-216ENST00000489602 WIZO95785 1651 aa10.23□□□□□ -0.77
VEPH1-216ENST00000489602 THOC2Q8NI27 1593 aaKnown RBP10.22□□□□□ -0.77
VEPH1-216ENST00000489602 PDS5BQ9NTI5 1447 aa10.22□□□□□ -0.77
VEPH1-216ENST00000489602 PRKAR2AP13861 404 aaKnown RBP10.21□□□□□ -0.77
VEPH1-216ENST00000489602 LAMC3Q9Y6N6 1575 aa10.21□□□□□ -0.78
VEPH1-216ENST00000489602 KCNA4P22459 653 aa10.18□□□□□ -0.78
VEPH1-216ENST00000489602 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
VEPH1-216ENST00000489602 CADPSQ9ULU8 1353 aa10.17□□□□□ -0.78
VEPH1-216ENST00000489602 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.78
VEPH1-216ENST00000489602 ATF5Q9Y2D1 282 aaPredicted RBP10.14□□□□□ -0.79
VEPH1-216ENST00000489602 CEP164Q9UPV0 1460 aa10.11□□□□□ -0.79
VEPH1-216ENST00000489602 POTEIP0CG38 1075 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms