RNA–Protein interactions for RNA: ENST00000488956.5

SHCBP1L-204, Transcript of SHC binding and spindle associated 1 like, human

TSL 2

Gene SHCBP1L, Length 2,540 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHCBP1L-204	ENST00000488956	NISCH	Q9Y2I1	1504 aa		40	■■■■□ 3.99
SHCBP1L-204	ENST00000488956	SHROOM4	Q9ULL8	1493 aa		34.18	■■■■□ 3.06
SHCBP1L-204	ENST00000488956	CCDC180	Q9P1Z9	1646 aa		33.91	■■■■□ 3.02
SHCBP1L-204	ENST00000488956	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.88	■■■■□ 3.01
SHCBP1L-204	ENST00000488956	SUPT5H	O00267	1087 aa	Known RBP	33.68	■■■□□ 2.98
SHCBP1L-204	ENST00000488956	DCAF8L2	P0C7V8	631 aa		33.02	■■■□□ 2.88
SHCBP1L-204	ENST00000488956	CHIC1	Q5VXU3	224 aa		32.91	■■■□□ 2.86
SHCBP1L-204	ENST00000488956	DCAF1	Q9Y4B6	1507 aa		32.87	■■■□□ 2.85
SHCBP1L-204	ENST00000488956	MYO15B	Q96JP2	1530 aa		32.78	■■■□□ 2.84
SHCBP1L-204	ENST00000488956	HRC	P23327	699 aa		32.33	■■■□□ 2.77
SHCBP1L-204	ENST00000488956	PCGF6	Q9BYE7	350 aa		32.1	■■■□□ 2.73
SHCBP1L-204	ENST00000488956	ABCC9	O60706	1549 aa		32	■■■□□ 2.71
SHCBP1L-204	ENST00000488956	LOC105371045	A0A1W2PR82	267 aa		31.89	■■■□□ 2.7
SHCBP1L-204	ENST00000488956	SCRIB	Q14160	1630 aa		31.75	■■■□□ 2.67
SHCBP1L-204	ENST00000488956	RSF1	Q96T23	1441 aa	Predicted RBP	31.74	■■■□□ 2.67
SHCBP1L-204	ENST00000488956	TRIM26	Q12899	539 aa	Predicted RBP	31.51	■■■□□ 2.64
SHCBP1L-204	ENST00000488956	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.51	■■■□□ 2.64
SHCBP1L-204	ENST00000488956	RB1CC1	Q8TDY2	1594 aa		31.45	■■■□□ 2.63
SHCBP1L-204	ENST00000488956	TRIM41	Q8WV44	630 aa		31.4	■■■□□ 2.62
SHCBP1L-204	ENST00000488956	NACAD	O15069	1562 aa		31.31	■■■□□ 2.6
SHCBP1L-204	ENST00000488956	CECR2	Q9BXF3	1484 aa		31.14	■■■□□ 2.58
SHCBP1L-204	ENST00000488956	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.08	■■■□□ 2.57
SHCBP1L-204	ENST00000488956	MROH2B	Q7Z745	1585 aa		31.07	■■■□□ 2.57
SHCBP1L-204	ENST00000488956	ZEB1	P37275	1124 aa	Predicted RBP	30.99	■■■□□ 2.55
SHCBP1L-204	ENST00000488956	WIZ	O95785	1651 aa		30.91	■■■□□ 2.54
SHCBP1L-204	ENST00000488956	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.78	■■■□□ 2.52
SHCBP1L-204	ENST00000488956	EHMT2	Q96KQ7	1210 aa		30.75	■■■□□ 2.51
SHCBP1L-204	ENST00000488956	EIF4G1	Q04637	1599 aa	Known RBP	30.62	■■■□□ 2.49
SHCBP1L-204	ENST00000488956	TOP2A	P11388	1531 aa	Known RBP	30.48	■■■□□ 2.47
SHCBP1L-204	ENST00000488956	SMARCA4	P51532	1647 aa		30.4	■■■□□ 2.46
SHCBP1L-204	ENST00000488956	CCDC88B	A6NC98	1476 aa		30.34	■■■□□ 2.45
SHCBP1L-204	ENST00000488956	SMARCA2	P51531	1590 aa		30.3	■■■□□ 2.44
SHCBP1L-204	ENST00000488956	ABCC8	Q09428	1581 aa		30.29	■■■□□ 2.44
SHCBP1L-204	ENST00000488956	UNC13A	Q9UPW8	1703 aa		30.21	■■■□□ 2.43
SHCBP1L-204	ENST00000488956	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.18	■■■□□ 2.42
SHCBP1L-204	ENST00000488956	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	30.13	■■■□□ 2.41
SHCBP1L-204	ENST00000488956	CCER1	Q8TC90	406 aa	Predicted RBP	30.12	■■■□□ 2.41
SHCBP1L-204	ENST00000488956	CEP162	Q5TB80	1403 aa		30.09	■■■□□ 2.41
SHCBP1L-204	ENST00000488956	SOGA1	O94964	1423 aa		30.09	■■■□□ 2.41
SHCBP1L-204	ENST00000488956	EEA1	Q15075	1411 aa		30.08	■■■□□ 2.41
SHCBP1L-204	ENST00000488956	TNIK	Q9UKE5	1360 aa		30.07	■■■□□ 2.4
SHCBP1L-204	ENST00000488956	CSRNP3	Q8WYN3	585 aa		29.99	■■■□□ 2.39
SHCBP1L-204	ENST00000488956	RUSC2	Q8N2Y8	1516 aa		29.9	■■■□□ 2.38
SHCBP1L-204	ENST00000488956	SCAF1	Q9H7N4	1312 aa	Known RBP	29.89	■■■□□ 2.38
SHCBP1L-204	ENST00000488956	UBTF	P17480	764 aa	Known RBP	29.87	■■■□□ 2.37
SHCBP1L-204	ENST00000488956	BICRA	Q9NZM4	1560 aa		29.85	■■■□□ 2.37
SHCBP1L-204	ENST00000488956	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.84	■■■□□ 2.37
SHCBP1L-204	ENST00000488956	GOLGA3	Q08378	1498 aa		29.84	■■■□□ 2.37
SHCBP1L-204	ENST00000488956	PEG3	Q9GZU2	1588 aa		29.84	■■■□□ 2.37
SHCBP1L-204	ENST00000488956	PABPN1	Q86U42	306 aa	Known RBP eCLIP	29.82	■■■□□ 2.36
SHCBP1L-204	ENST00000488956	PELP1	Q8IZL8	1130 aa	Known RBP	29.68	■■■□□ 2.34
SHCBP1L-204	ENST00000488956	DIEXF	Q68CQ4	756 aa	Known RBP	29.66	■■■□□ 2.34
SHCBP1L-204	ENST00000488956	CEP164	Q9UPV0	1460 aa		29.65	■■■□□ 2.34
SHCBP1L-204	ENST00000488956	SYNJ1	O43426	1573 aa		29.62	■■■□□ 2.33
SHCBP1L-204	ENST00000488956	KIF21B	O75037	1637 aa		29.6	■■■□□ 2.33
SHCBP1L-204	ENST00000488956	ACIN1	Q9UKV3	1341 aa	Known RBP	29.59	■■■□□ 2.33
SHCBP1L-204	ENST00000488956	ATAD2B	Q9ULI0	1458 aa		29.57	■■■□□ 2.32
SHCBP1L-204	ENST00000488956	BAZ1B	Q9UIG0	1483 aa	Known RBP	29.5	■■■□□ 2.31
SHCBP1L-204	ENST00000488956	CLIP1	P30622	1438 aa		29.49	■■■□□ 2.31
SHCBP1L-204	ENST00000488956	NEUROD1	Q13562	356 aa		29.48	■■■□□ 2.31
SHCBP1L-204	ENST00000488956	CENPB	P07199	599 aa	Predicted RBP	29.42	■■■□□ 2.3
SHCBP1L-204	ENST00000488956	VPS8	Q8N3P4	1428 aa		29.41	■■■□□ 2.3
SHCBP1L-204	ENST00000488956	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.4	■■■□□ 2.3
SHCBP1L-204	ENST00000488956	RAPGEF2	Q9Y4G8	1499 aa		29.35	■■■□□ 2.29
SHCBP1L-204	ENST00000488956	HNRNPUL2	Q1KMD3	747 aa	Known RBP	29.32	■■■□□ 2.28
SHCBP1L-204	ENST00000488956	APLP2	Q06481	763 aa		29.31	■■■□□ 2.28
SHCBP1L-204	ENST00000488956	TOP2B	Q02880	1626 aa		29.28	■■■□□ 2.28
SHCBP1L-204	ENST00000488956	GTF3C3	Q9Y5Q9	886 aa		29.22	■■■□□ 2.27
SHCBP1L-204	ENST00000488956	BIVM-ERCC5	R4GMW8	1640 aa		29.16	■■■□□ 2.26
SHCBP1L-204	ENST00000488956	RANGAP1	P46060	587 aa	Predicted RBP	29.12	■■■□□ 2.25
SHCBP1L-204	ENST00000488956	ERICH3	Q5RHP9	1530 aa		29.1	■■■□□ 2.25
SHCBP1L-204	ENST00000488956	PRX	Q9BXM0	1461 aa		29.07	■■■□□ 2.24
SHCBP1L-204	ENST00000488956	HMGXB3	Q12766	1538 aa		28.98	■■■□□ 2.23
SHCBP1L-204	ENST00000488956	NCAPD3	P42695	1498 aa		28.97	■■■□□ 2.23
SHCBP1L-204	ENST00000488956	ARAP1	Q96P48	1450 aa		28.97	■■■□□ 2.23
SHCBP1L-204	ENST00000488956	MIER1	Q8N108	512 aa		28.96	■■■□□ 2.23
SHCBP1L-204	ENST00000488956	CLSPN	Q9HAW4	1339 aa		28.94	■■■□□ 2.22
SHCBP1L-204	ENST00000488956	CUX1	P39880	1505 aa		28.91	■■■□□ 2.22
SHCBP1L-204	ENST00000488956	YTHDC1	Q96MU7	727 aa	Known RBP	28.9	■■■□□ 2.22
SHCBP1L-204	ENST00000488956	KIF27	Q86VH2	1401 aa		28.9	■■■□□ 2.22
SHCBP1L-204	ENST00000488956	DHX57	Q6P158	1386 aa	Known RBP	28.83	■■■□□ 2.21
SHCBP1L-204	ENST00000488956	KANK4	Q5T7N3	995 aa	Predicted RBP	28.83	■■■□□ 2.21
SHCBP1L-204	ENST00000488956	CFTR	P13569	1480 aa		28.8	■■■□□ 2.2
SHCBP1L-204	ENST00000488956	RRBP1	Q9P2E9	1410 aa	Known RBP	28.77	■■■□□ 2.2
SHCBP1L-204	ENST00000488956	ARHGAP35	Q9NRY4	1499 aa		28.69	■■■□□ 2.18
SHCBP1L-204	ENST00000488956	CUX2	O14529	1486 aa		28.65	■■■□□ 2.18
SHCBP1L-204	ENST00000488956	CCNB3	Q8WWL7	1395 aa		28.63	■■■□□ 2.17
SHCBP1L-204	ENST00000488956	PRDM2	Q13029	1718 aa		28.55	■■■□□ 2.16
SHCBP1L-204	ENST00000488956	IGF1R	P08069	1367 aa		28.54	■■■□□ 2.16
SHCBP1L-204	ENST00000488956	MAP3K1	Q13233	1512 aa		28.48	■■■□□ 2.15
SHCBP1L-204	ENST00000488956	CADPS	Q9ULU8	1353 aa		28.44	■■■□□ 2.14
SHCBP1L-204	ENST00000488956	ITGAE	P38570	1179 aa		28.43	■■■□□ 2.14
SHCBP1L-204	ENST00000488956	TIAM1	Q13009	1591 aa		28.43	■■■□□ 2.14
SHCBP1L-204	ENST00000488956	CARMIL1	Q5VZK9	1371 aa		28.43	■■■□□ 2.14
SHCBP1L-204	ENST00000488956	RAB3GAP2	Q9H2M9	1393 aa		28.38	■■■□□ 2.13
SHCBP1L-204	ENST00000488956	FGD5	Q6ZNL6	1462 aa		28.37	■■■□□ 2.13
SHCBP1L-204	ENST00000488956	LRRC9	Q6ZRR7	1453 aa		28.33	■■■□□ 2.13
SHCBP1L-204	ENST00000488956	FHAD1	B1AJZ9	1412 aa		28.29	■■■□□ 2.12
SHCBP1L-204	ENST00000488956	MAPKBP1	O60336	1514 aa		28.29	■■■□□ 2.12
SHCBP1L-204	ENST00000488956	SETD5	Q9C0A6	1442 aa		28.28	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms