RNA–Protein interactions for RNA: ENST00000488956.5

SHCBP1L-204, Transcript of SHC binding and spindle associated 1 like, humanhuman

TSL 2

Gene SHCBP1L, Length 2,540 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1L-204ENST00000488956 NISCHQ9Y2I1 1504 aa40■■■■□ 3.99
SHCBP1L-204ENST00000488956 SHROOM4Q9ULL8 1493 aa34.18■■■■□ 3.06
SHCBP1L-204ENST00000488956 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
SHCBP1L-204ENST00000488956 ZCCHC6Q5VYS8 1495 aaKnown RBP33.88■■■■□ 3.01
SHCBP1L-204ENST00000488956 SUPT5HO00267 1087 aaKnown RBP33.68■■■□□ 2.98
SHCBP1L-204ENST00000488956 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
SHCBP1L-204ENST00000488956 CHIC1Q5VXU3 224 aa32.91■■■□□ 2.86
SHCBP1L-204ENST00000488956 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
SHCBP1L-204ENST00000488956 MYO15BQ96JP2 1530 aa32.78■■■□□ 2.84
SHCBP1L-204ENST00000488956 HRCP23327 699 aa32.33■■■□□ 2.77
SHCBP1L-204ENST00000488956 PCGF6Q9BYE7 350 aa32.1■■■□□ 2.73
SHCBP1L-204ENST00000488956 ABCC9O60706 1549 aa32■■■□□ 2.71
SHCBP1L-204ENST00000488956 LOC105371045A0A1W2PR82 267 aa31.89■■■□□ 2.7
SHCBP1L-204ENST00000488956 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
SHCBP1L-204ENST00000488956 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
SHCBP1L-204ENST00000488956 TRIM26Q12899 539 aaPredicted RBP31.51■■■□□ 2.64
SHCBP1L-204ENST00000488956 PPARGC1BQ86YN6 1023 aaKnown RBP31.51■■■□□ 2.64
SHCBP1L-204ENST00000488956 RB1CC1Q8TDY2 1594 aa31.45■■■□□ 2.63
SHCBP1L-204ENST00000488956 TRIM41Q8WV44 630 aa31.4■■■□□ 2.62
SHCBP1L-204ENST00000488956 NACADO15069 1562 aa31.31■■■□□ 2.6
SHCBP1L-204ENST00000488956 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
SHCBP1L-204ENST00000488956 FAM9AQ8IZU1 332 aaPredicted RBP31.08■■■□□ 2.57
SHCBP1L-204ENST00000488956 MROH2BQ7Z745 1585 aa31.07■■■□□ 2.57
SHCBP1L-204ENST00000488956 ZEB1P37275 1124 aaPredicted RBP30.99■■■□□ 2.55
SHCBP1L-204ENST00000488956 WIZO95785 1651 aa30.91■■■□□ 2.54
SHCBP1L-204ENST00000488956 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
SHCBP1L-204ENST00000488956 EHMT2Q96KQ7 1210 aa30.75■■■□□ 2.51
SHCBP1L-204ENST00000488956 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
SHCBP1L-204ENST00000488956 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
SHCBP1L-204ENST00000488956 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
SHCBP1L-204ENST00000488956 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
SHCBP1L-204ENST00000488956 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
SHCBP1L-204ENST00000488956 ABCC8Q09428 1581 aa30.29■■■□□ 2.44
SHCBP1L-204ENST00000488956 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
SHCBP1L-204ENST00000488956 WRNQ14191 1432 aaPredicted RBP eCLIP30.18■■■□□ 2.42
SHCBP1L-204ENST00000488956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.13■■■□□ 2.41
SHCBP1L-204ENST00000488956 CCER1Q8TC90 406 aaPredicted RBP30.12■■■□□ 2.41
SHCBP1L-204ENST00000488956 CEP162Q5TB80 1403 aa30.09■■■□□ 2.41
SHCBP1L-204ENST00000488956 SOGA1O94964 1423 aa30.09■■■□□ 2.41
SHCBP1L-204ENST00000488956 EEA1Q15075 1411 aa30.08■■■□□ 2.41
SHCBP1L-204ENST00000488956 TNIKQ9UKE5 1360 aa30.07■■■□□ 2.4
SHCBP1L-204ENST00000488956 CSRNP3Q8WYN3 585 aa29.99■■■□□ 2.39
SHCBP1L-204ENST00000488956 RUSC2Q8N2Y8 1516 aa29.9■■■□□ 2.38
SHCBP1L-204ENST00000488956 SCAF1Q9H7N4 1312 aaKnown RBP29.89■■■□□ 2.38
SHCBP1L-204ENST00000488956 UBTFP17480 764 aaKnown RBP29.87■■■□□ 2.37
SHCBP1L-204ENST00000488956 BICRAQ9NZM4 1560 aa29.85■■■□□ 2.37
SHCBP1L-204ENST00000488956 TTBK1Q5TCY1 1321 aaPredicted RBP29.84■■■□□ 2.37
SHCBP1L-204ENST00000488956 GOLGA3Q08378 1498 aa29.84■■■□□ 2.37
SHCBP1L-204ENST00000488956 PEG3Q9GZU2 1588 aa29.84■■■□□ 2.37
SHCBP1L-204ENST00000488956 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.36
SHCBP1L-204ENST00000488956 PELP1Q8IZL8 1130 aaKnown RBP29.68■■■□□ 2.34
SHCBP1L-204ENST00000488956 DIEXFQ68CQ4 756 aaKnown RBP29.66■■■□□ 2.34
SHCBP1L-204ENST00000488956 CEP164Q9UPV0 1460 aa29.65■■■□□ 2.34
SHCBP1L-204ENST00000488956 SYNJ1O43426 1573 aa29.62■■■□□ 2.33
SHCBP1L-204ENST00000488956 KIF21BO75037 1637 aa29.6■■■□□ 2.33
SHCBP1L-204ENST00000488956 ACIN1Q9UKV3 1341 aaKnown RBP29.59■■■□□ 2.33
SHCBP1L-204ENST00000488956 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
SHCBP1L-204ENST00000488956 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
SHCBP1L-204ENST00000488956 CLIP1P30622 1438 aa29.49■■■□□ 2.31
SHCBP1L-204ENST00000488956 NEUROD1Q13562 356 aa29.48■■■□□ 2.31
SHCBP1L-204ENST00000488956 CENPBP07199 599 aaPredicted RBP29.42■■■□□ 2.3
SHCBP1L-204ENST00000488956 VPS8Q8N3P4 1428 aa29.41■■■□□ 2.3
SHCBP1L-204ENST00000488956 ZNF316A6NFI3 1004 aaPredicted RBP29.4■■■□□ 2.3
SHCBP1L-204ENST00000488956 RAPGEF2Q9Y4G8 1499 aa29.35■■■□□ 2.29
SHCBP1L-204ENST00000488956 HNRNPUL2Q1KMD3 747 aaKnown RBP29.32■■■□□ 2.28
SHCBP1L-204ENST00000488956 APLP2Q06481 763 aa29.31■■■□□ 2.28
SHCBP1L-204ENST00000488956 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
SHCBP1L-204ENST00000488956 GTF3C3Q9Y5Q9 886 aa29.22■■■□□ 2.27
SHCBP1L-204ENST00000488956 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
SHCBP1L-204ENST00000488956 RANGAP1P46060 587 aaPredicted RBP29.12■■■□□ 2.25
SHCBP1L-204ENST00000488956 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
SHCBP1L-204ENST00000488956 PRXQ9BXM0 1461 aa29.07■■■□□ 2.24
SHCBP1L-204ENST00000488956 HMGXB3Q12766 1538 aa28.98■■■□□ 2.23
SHCBP1L-204ENST00000488956 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
SHCBP1L-204ENST00000488956 ARAP1Q96P48 1450 aa28.97■■■□□ 2.23
SHCBP1L-204ENST00000488956 MIER1Q8N108 512 aa28.96■■■□□ 2.23
SHCBP1L-204ENST00000488956 CLSPNQ9HAW4 1339 aa28.94■■■□□ 2.22
SHCBP1L-204ENST00000488956 CUX1P39880 1505 aa28.91■■■□□ 2.22
SHCBP1L-204ENST00000488956 YTHDC1Q96MU7 727 aaKnown RBP28.9■■■□□ 2.22
SHCBP1L-204ENST00000488956 KIF27Q86VH2 1401 aa28.9■■■□□ 2.22
SHCBP1L-204ENST00000488956 DHX57Q6P158 1386 aaKnown RBP28.83■■■□□ 2.21
SHCBP1L-204ENST00000488956 KANK4Q5T7N3 995 aaPredicted RBP28.83■■■□□ 2.21
SHCBP1L-204ENST00000488956 CFTRP13569 1480 aa28.8■■■□□ 2.2
SHCBP1L-204ENST00000488956 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
SHCBP1L-204ENST00000488956 ARHGAP35Q9NRY4 1499 aa28.69■■■□□ 2.18
SHCBP1L-204ENST00000488956 CUX2O14529 1486 aa28.65■■■□□ 2.18
SHCBP1L-204ENST00000488956 CCNB3Q8WWL7 1395 aa28.63■■■□□ 2.17
SHCBP1L-204ENST00000488956 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
SHCBP1L-204ENST00000488956 IGF1RP08069 1367 aa28.54■■■□□ 2.16
SHCBP1L-204ENST00000488956 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
SHCBP1L-204ENST00000488956 CADPSQ9ULU8 1353 aa28.44■■■□□ 2.14
SHCBP1L-204ENST00000488956 ITGAEP38570 1179 aa28.43■■■□□ 2.14
SHCBP1L-204ENST00000488956 TIAM1Q13009 1591 aa28.43■■■□□ 2.14
SHCBP1L-204ENST00000488956 CARMIL1Q5VZK9 1371 aa28.43■■■□□ 2.14
SHCBP1L-204ENST00000488956 RAB3GAP2Q9H2M9 1393 aa28.38■■■□□ 2.13
SHCBP1L-204ENST00000488956 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
SHCBP1L-204ENST00000488956 LRRC9Q6ZRR7 1453 aa28.33■■■□□ 2.13
SHCBP1L-204ENST00000488956 FHAD1B1AJZ9 1412 aa28.29■■■□□ 2.12
SHCBP1L-204ENST00000488956 MAPKBP1O60336 1514 aa28.29■■■□□ 2.12
SHCBP1L-204ENST00000488956 SETD5Q9C0A6 1442 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms