RNA–Protein interactions for RNA: ENST00000488605.1

PHF11-214, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-214ENST00000488605 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
PHF11-214ENST00000488605 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
PHF11-214ENST00000488605 PHF23Q9BUL5 403 aaPredicted RBP22.34■■□□□ 1.17
PHF11-214ENST00000488605 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
PHF11-214ENST00000488605 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
PHF11-214ENST00000488605 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
PHF11-214ENST00000488605 FOXD1Q16676 465 aa20.47■□□□□ 0.87
PHF11-214ENST00000488605 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
PHF11-214ENST00000488605 ADRA2BP18089 450 aa19.57■□□□□ 0.72
PHF11-214ENST00000488605 PPP6R1Q9UPN7 881 aa19.55■□□□□ 0.72
PHF11-214ENST00000488605 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
PHF11-214ENST00000488605 MSH5O43196 834 aa19.26■□□□□ 0.67
PHF11-214ENST00000488605 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
PHF11-214ENST00000488605 ZCCHC6Q5VYS8 1495 aaKnown RBP18.66■□□□□ 0.58
PHF11-214ENST00000488605 KCNA4P22459 653 aa18.54■□□□□ 0.56
PHF11-214ENST00000488605 ABCC9O60706 1549 aa18.43■□□□□ 0.54
PHF11-214ENST00000488605 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
PHF11-214ENST00000488605 PPP4R3CPQ6ZMV5 832 aa18.36■□□□□ 0.53
PHF11-214ENST00000488605 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
PHF11-214ENST00000488605 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
PHF11-214ENST00000488605 NACADO15069 1562 aa18.1■□□□□ 0.49
PHF11-214ENST00000488605 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
PHF11-214ENST00000488605 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
PHF11-214ENST00000488605 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
PHF11-214ENST00000488605 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
PHF11-214ENST00000488605 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.44
PHF11-214ENST00000488605 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
PHF11-214ENST00000488605 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
PHF11-214ENST00000488605 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
PHF11-214ENST00000488605 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
PHF11-214ENST00000488605 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
PHF11-214ENST00000488605 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
PHF11-214ENST00000488605 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
PHF11-214ENST00000488605 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
PHF11-214ENST00000488605 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
PHF11-214ENST00000488605 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
PHF11-214ENST00000488605 DMRT2Q9Y5R5 561 aa17.27■□□□□ 0.36
PHF11-214ENST00000488605 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
PHF11-214ENST00000488605 RNF216Q9NWF9 866 aaPredicted RBP17.24■□□□□ 0.35
PHF11-214ENST00000488605 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
PHF11-214ENST00000488605 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
PHF11-214ENST00000488605 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
PHF11-214ENST00000488605 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
PHF11-214ENST00000488605 ZBTB22O15209 634 aa17.09■□□□□ 0.33
PHF11-214ENST00000488605 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
PHF11-214ENST00000488605 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
PHF11-214ENST00000488605 WIZO95785 1651 aa16.98■□□□□ 0.31
PHF11-214ENST00000488605 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.3
PHF11-214ENST00000488605 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
PHF11-214ENST00000488605 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
PHF11-214ENST00000488605 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
PHF11-214ENST00000488605 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
PHF11-214ENST00000488605 CACNB1Q02641 598 aaPredicted RBP16.83■□□□□ 0.28
PHF11-214ENST00000488605 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
PHF11-214ENST00000488605 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
PHF11-214ENST00000488605 NCAPD3P42695 1498 aa16.7■□□□□ 0.26
PHF11-214ENST00000488605 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
PHF11-214ENST00000488605 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
PHF11-214ENST00000488605 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
PHF11-214ENST00000488605 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
PHF11-214ENST00000488605 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
PHF11-214ENST00000488605 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
PHF11-214ENST00000488605 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
PHF11-214ENST00000488605 CFTRP13569 1480 aa16.31■□□□□ 0.2
PHF11-214ENST00000488605 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
PHF11-214ENST00000488605 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
PHF11-214ENST00000488605 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
PHF11-214ENST00000488605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
PHF11-214ENST00000488605 WRNQ14191 1432 aaPredicted RBP eCLIP16.19■□□□□ 0.18
PHF11-214ENST00000488605 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
PHF11-214ENST00000488605 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
PHF11-214ENST00000488605 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
PHF11-214ENST00000488605 NESP48681 1621 aa16.14■□□□□ 0.17
PHF11-214ENST00000488605 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
PHF11-214ENST00000488605 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
PHF11-214ENST00000488605 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
PHF11-214ENST00000488605 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
PHF11-214ENST00000488605 TOP2BQ02880 1626 aa16.06■□□□□ 0.16
PHF11-214ENST00000488605 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
PHF11-214ENST00000488605 CUX1P39880 1505 aa16.05■□□□□ 0.16
PHF11-214ENST00000488605 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
PHF11-214ENST00000488605 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
PHF11-214ENST00000488605 ATF5Q9Y2D1 282 aaPredicted RBP15.97■□□□□ 0.15
PHF11-214ENST00000488605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
PHF11-214ENST00000488605 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
PHF11-214ENST00000488605 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
PHF11-214ENST00000488605 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
PHF11-214ENST00000488605 SOGA1O94964 1423 aa15.94■□□□□ 0.14
PHF11-214ENST00000488605 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
PHF11-214ENST00000488605 EEA1Q15075 1411 aa15.94■□□□□ 0.14
PHF11-214ENST00000488605 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
PHF11-214ENST00000488605 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
PHF11-214ENST00000488605 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
PHF11-214ENST00000488605 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
PHF11-214ENST00000488605 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
PHF11-214ENST00000488605 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
PHF11-214ENST00000488605 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
PHF11-214ENST00000488605 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
PHF11-214ENST00000488605 ERCC6Q03468 1493 aa15.83■□□□□ 0.12
PHF11-214ENST00000488605 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms