RNA–Protein interactions for RNA: ENST00000486466.1

CBWD5-228, Transcript of COBW domain containing 5, humanhuman

TSL 2

Gene CBWD5, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD5-228ENST00000486466 AEBP2Q6ZN18 517 aaPredicted RBP32.48■■■□□ 2.79
CBWD5-228ENST00000486466 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
CBWD5-228ENST00000486466 SENP3Q9H4L4 574 aaPredicted RBP27.71■■■□□ 2.03
CBWD5-228ENST00000486466 PHF23Q9BUL5 403 aaPredicted RBP27.37■■□□□ 1.97
CBWD5-228ENST00000486466 FOXD1Q16676 465 aa25.78■■□□□ 1.72
CBWD5-228ENST00000486466 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
CBWD5-228ENST00000486466 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.49
CBWD5-228ENST00000486466 PPP6R1Q9UPN7 881 aa24.27■■□□□ 1.48
CBWD5-228ENST00000486466 ADRA2BP18089 450 aa24.22■■□□□ 1.47
CBWD5-228ENST00000486466 PIAS4Q8N2W9 510 aaPredicted RBP24.15■■□□□ 1.46
CBWD5-228ENST00000486466 MSH5O43196 834 aa24.05■■□□□ 1.44
CBWD5-228ENST00000486466 POTEDQ86YR6 584 aa23.04■■□□□ 1.28
CBWD5-228ENST00000486466 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
CBWD5-228ENST00000486466 MAPK8IP2Q13387 824 aaPredicted RBP22.17■■□□□ 1.14
CBWD5-228ENST00000486466 ABCC9O60706 1549 aa22.04■■□□□ 1.12
CBWD5-228ENST00000486466 DMRT2Q9Y5R5 561 aa22.01■■□□□ 1.11
CBWD5-228ENST00000486466 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
CBWD5-228ENST00000486466 PPP4R3CPQ6ZMV5 832 aa21.91■■□□□ 1.1
CBWD5-228ENST00000486466 CNKSR2Q8WXI2 1034 aa21.45■■□□□ 1.02
CBWD5-228ENST00000486466 HOXD11P31277 338 aaPredicted RBP21.29■■□□□ 1
CBWD5-228ENST00000486466 RNF216Q9NWF9 866 aaPredicted RBP21.2■□□□□ 0.98
CBWD5-228ENST00000486466 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
CBWD5-228ENST00000486466 DCAF8L1A6NGE4 600 aa21.08■□□□□ 0.97
CBWD5-228ENST00000486466 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
CBWD5-228ENST00000486466 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
CBWD5-228ENST00000486466 NPM3O75607 178 aaKnown RBP20.82■□□□□ 0.92
CBWD5-228ENST00000486466 NACADO15069 1562 aa20.77■□□□□ 0.92
CBWD5-228ENST00000486466 KCNA4P22459 653 aa20.64■□□□□ 0.89
CBWD5-228ENST00000486466 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
CBWD5-228ENST00000486466 RNF39Q9H2S5 420 aa20.53■□□□□ 0.88
CBWD5-228ENST00000486466 CACNB1Q02641 598 aaPredicted RBP20.48■□□□□ 0.87
CBWD5-228ENST00000486466 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
CBWD5-228ENST00000486466 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
CBWD5-228ENST00000486466 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
CBWD5-228ENST00000486466 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
CBWD5-228ENST00000486466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.84
CBWD5-228ENST00000486466 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
CBWD5-228ENST00000486466 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
CBWD5-228ENST00000486466 DCAF1Q9Y4B6 1507 aa20.16■□□□□ 0.82
CBWD5-228ENST00000486466 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
CBWD5-228ENST00000486466 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
CBWD5-228ENST00000486466 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
CBWD5-228ENST00000486466 EIF4G1Q04637 1599 aaKnown RBP19.88■□□□□ 0.77
CBWD5-228ENST00000486466 U3KPZ7 1027 aaPredicted RBP19.87■□□□□ 0.77
CBWD5-228ENST00000486466 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
CBWD5-228ENST00000486466 SLC4A2P04920 1241 aa19.83■□□□□ 0.77
CBWD5-228ENST00000486466 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
CBWD5-228ENST00000486466 SPINK5Q9NQ38 1064 aaPredicted RBP19.51■□□□□ 0.71
CBWD5-228ENST00000486466 CAPN15O75808 1086 aa19.48■□□□□ 0.71
CBWD5-228ENST00000486466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
CBWD5-228ENST00000486466 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
CBWD5-228ENST00000486466 APLP2Q06481 763 aa19.38■□□□□ 0.69
CBWD5-228ENST00000486466 SAMD1Q6SPF0 538 aaPredicted RBP19.32■□□□□ 0.68
CBWD5-228ENST00000486466 DSG3P32926 999 aa19.31■□□□□ 0.68
CBWD5-228ENST00000486466 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
CBWD5-228ENST00000486466 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
CBWD5-228ENST00000486466 DNAJC5Q9H3Z4 198 aa19.2■□□□□ 0.66
CBWD5-228ENST00000486466 ZNF219Q9P2Y4 722 aaPredicted RBP19.2■□□□□ 0.66
CBWD5-228ENST00000486466 FOXD4L1Q9NU39 408 aa19.19■□□□□ 0.66
CBWD5-228ENST00000486466 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
CBWD5-228ENST00000486466 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
CBWD5-228ENST00000486466 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
CBWD5-228ENST00000486466 CUX2O14529 1486 aa19.07■□□□□ 0.64
CBWD5-228ENST00000486466 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
CBWD5-228ENST00000486466 ABCB7O75027 752 aa19.02■□□□□ 0.64
CBWD5-228ENST00000486466 SMARCA2P51531 1590 aa19.02■□□□□ 0.63
CBWD5-228ENST00000486466 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
CBWD5-228ENST00000486466 ZBTB22O15209 634 aa18.96■□□□□ 0.63
CBWD5-228ENST00000486466 NESP48681 1621 aa18.94■□□□□ 0.62
CBWD5-228ENST00000486466 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
CBWD5-228ENST00000486466 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
CBWD5-228ENST00000486466 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
CBWD5-228ENST00000486466 THOC2Q8NI27 1593 aaKnown RBP18.83■□□□□ 0.6
CBWD5-228ENST00000486466 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
CBWD5-228ENST00000486466 ATF5Q9Y2D1 282 aaPredicted RBP18.78■□□□□ 0.6
CBWD5-228ENST00000486466 POLA2Q14181 598 aa18.77■□□□□ 0.6
CBWD5-228ENST00000486466 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
CBWD5-228ENST00000486466 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
CBWD5-228ENST00000486466 ATXN8OSP0DMR3 200 aa18.6■□□□□ 0.57
CBWD5-228ENST00000486466 PDS5BQ9NTI5 1447 aa18.58■□□□□ 0.57
CBWD5-228ENST00000486466 WIZO95785 1651 aa18.58■□□□□ 0.57
CBWD5-228ENST00000486466 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
CBWD5-228ENST00000486466 WDR62O43379 1518 aa18.5■□□□□ 0.55
CBWD5-228ENST00000486466 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
CBWD5-228ENST00000486466 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
CBWD5-228ENST00000486466 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
CBWD5-228ENST00000486466 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
CBWD5-228ENST00000486466 CFTRP13569 1480 aa18.35■□□□□ 0.53
CBWD5-228ENST00000486466 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
CBWD5-228ENST00000486466 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.53
CBWD5-228ENST00000486466 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
CBWD5-228ENST00000486466 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
CBWD5-228ENST00000486466 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
CBWD5-228ENST00000486466 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
CBWD5-228ENST00000486466 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
CBWD5-228ENST00000486466 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
CBWD5-228ENST00000486466 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
CBWD5-228ENST00000486466 POTEHQ6S545 545 aa18.11■□□□□ 0.49
CBWD5-228ENST00000486466 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
CBWD5-228ENST00000486466 FBLN2P98095 1184 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms