RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
GTF2B-206ENST00000486078 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
GTF2B-206ENST00000486078 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
GTF2B-206ENST00000486078 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
GTF2B-206ENST00000486078 FOXD1Q16676 465 aa13.89□□□□□ -0.19
GTF2B-206ENST00000486078 PLPPR3Q6T4P5 718 aa13.79□□□□□ -0.2
GTF2B-206ENST00000486078 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
GTF2B-206ENST00000486078 ADRA2BP18089 450 aa13.21□□□□□ -0.29
GTF2B-206ENST00000486078 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
GTF2B-206ENST00000486078 MSH5O43196 834 aa12.91□□□□□ -0.34
GTF2B-206ENST00000486078 NISCHQ9Y2I1 1504 aa12.6□□□□□ -0.39
GTF2B-206ENST00000486078 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
GTF2B-206ENST00000486078 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
GTF2B-206ENST00000486078 ABCC9O60706 1549 aa12.05□□□□□ -0.48
GTF2B-206ENST00000486078 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
GTF2B-206ENST00000486078 POTEDQ86YR6 584 aa11.98□□□□□ -0.49
GTF2B-206ENST00000486078 DMRT2Q9Y5R5 561 aa11.91□□□□□ -0.5
GTF2B-206ENST00000486078 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
GTF2B-206ENST00000486078 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
GTF2B-206ENST00000486078 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
GTF2B-206ENST00000486078 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
GTF2B-206ENST00000486078 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
GTF2B-206ENST00000486078 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
GTF2B-206ENST00000486078 KCNA4P22459 653 aa11.61□□□□□ -0.55
GTF2B-206ENST00000486078 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
GTF2B-206ENST00000486078 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
GTF2B-206ENST00000486078 DCAF8L1A6NGE4 600 aa11.38□□□□□ -0.59
GTF2B-206ENST00000486078 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
GTF2B-206ENST00000486078 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.61
GTF2B-206ENST00000486078 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
GTF2B-206ENST00000486078 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
GTF2B-206ENST00000486078 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
GTF2B-206ENST00000486078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
GTF2B-206ENST00000486078 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
GTF2B-206ENST00000486078 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
GTF2B-206ENST00000486078 NACADO15069 1562 aa11□□□□□ -0.65
GTF2B-206ENST00000486078 DCAF8L2P0C7V8 631 aa10.96□□□□□ -0.65
GTF2B-206ENST00000486078 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
GTF2B-206ENST00000486078 SLC4A2P04920 1241 aa10.95□□□□□ -0.66
GTF2B-206ENST00000486078 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
GTF2B-206ENST00000486078 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
GTF2B-206ENST00000486078 CECR2Q9BXF3 1484 aa10.89□□□□□ -0.67
GTF2B-206ENST00000486078 CACNB1Q02641 598 aaPredicted RBP10.86□□□□□ -0.67
GTF2B-206ENST00000486078 U3KPZ7 1027 aaPredicted RBP10.84□□□□□ -0.67
GTF2B-206ENST00000486078 CC2D2AQ9P2K1 1620 aa10.84□□□□□ -0.67
GTF2B-206ENST00000486078 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
GTF2B-206ENST00000486078 RTN4Q9NQC3 1192 aaKnown RBP10.76□□□□□ -0.69
GTF2B-206ENST00000486078 FOXD4L1Q9NU39 408 aa10.76□□□□□ -0.69
GTF2B-206ENST00000486078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.73□□□□□ -0.69
GTF2B-206ENST00000486078 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
GTF2B-206ENST00000486078 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.69
GTF2B-206ENST00000486078 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
GTF2B-206ENST00000486078 APLP2Q06481 763 aa10.67□□□□□ -0.7
GTF2B-206ENST00000486078 ZBTB22O15209 634 aa10.66□□□□□ -0.7
GTF2B-206ENST00000486078 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
GTF2B-206ENST00000486078 SHROOM4Q9ULL8 1493 aa10.66□□□□□ -0.7
GTF2B-206ENST00000486078 MYO15BQ96JP2 1530 aa10.65□□□□□ -0.7
GTF2B-206ENST00000486078 SPINK5Q9NQ38 1064 aaPredicted RBP10.57□□□□□ -0.72
GTF2B-206ENST00000486078 CAPN15O75808 1086 aa10.56□□□□□ -0.72
GTF2B-206ENST00000486078 CUX2O14529 1486 aa10.55□□□□□ -0.72
GTF2B-206ENST00000486078 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
GTF2B-206ENST00000486078 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
GTF2B-206ENST00000486078 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
GTF2B-206ENST00000486078 ATXN8OSP0DMR3 200 aa10.47□□□□□ -0.73
GTF2B-206ENST00000486078 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
GTF2B-206ENST00000486078 ERCC6Q03468 1493 aa10.44□□□□□ -0.74
GTF2B-206ENST00000486078 DSG3P32926 999 aa10.43□□□□□ -0.74
GTF2B-206ENST00000486078 ATF5Q9Y2D1 282 aaPredicted RBP10.39□□□□□ -0.75
GTF2B-206ENST00000486078 DCAF1Q9Y4B6 1507 aa10.34□□□□□ -0.75
GTF2B-206ENST00000486078 ZCCHC6Q5VYS8 1495 aaKnown RBP10.31□□□□□ -0.76
GTF2B-206ENST00000486078 ABCB7O75027 752 aa10.31□□□□□ -0.76
GTF2B-206ENST00000486078 POLA2Q14181 598 aa10.29□□□□□ -0.76
GTF2B-206ENST00000486078 NESP48681 1621 aa10.2□□□□□ -0.78
GTF2B-206ENST00000486078 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
GTF2B-206ENST00000486078 THOC2Q8NI27 1593 aaKnown RBP10.16□□□□□ -0.78
GTF2B-206ENST00000486078 ZBTB12Q9Y330 459 aaPredicted RBP10.14□□□□□ -0.79
GTF2B-206ENST00000486078 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
GTF2B-206ENST00000486078 ATAD2BQ9ULI0 1458 aa10.07□□□□□ -0.8
GTF2B-206ENST00000486078 OSCARQ8IYS5 282 aa10.05□□□□□ -0.8
GTF2B-206ENST00000486078 KIF21AQ7Z4S6 1674 aa10.04□□□□□ -0.8
GTF2B-206ENST00000486078 FKBP8Q14318 412 aa10.04□□□□□ -0.8
GTF2B-206ENST00000486078 HMGXB3Q12766 1538 aa10.02□□□□□ -0.8
GTF2B-206ENST00000486078 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
GTF2B-206ENST00000486078 FBLN2P98095 1184 aa10.02□□□□□ -0.81
GTF2B-206ENST00000486078 BAZ1AQ9NRL2 1556 aaPredicted RBP10.01□□□□□ -0.81
GTF2B-206ENST00000486078 PDS5BQ9NTI5 1447 aa10□□□□□ -0.81
GTF2B-206ENST00000486078 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
GTF2B-206ENST00000486078 BAZ1BQ9UIG0 1483 aaKnown RBP9.96□□□□□ -0.82
GTF2B-206ENST00000486078 RIMBP3CA6NJZ7 1639 aa9.94□□□□□ -0.82
GTF2B-206ENST00000486078 RIMBP3BA6NNM3 1639 aa9.94□□□□□ -0.82
GTF2B-206ENST00000486078 RIMBP3Q9UFD9 1639 aa9.94□□□□□ -0.82
GTF2B-206ENST00000486078 MRC2Q9UBG0 1479 aa9.93□□□□□ -0.82
GTF2B-206ENST00000486078 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
GTF2B-206ENST00000486078 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
GTF2B-206ENST00000486078 WDR62O43379 1518 aa9.91□□□□□ -0.82
GTF2B-206ENST00000486078 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
GTF2B-206ENST00000486078 BCANQ96GW7 911 aa9.88□□□□□ -0.83
GTF2B-206ENST00000486078 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
GTF2B-206ENST00000486078 CADPSQ9ULU8 1353 aa9.86□□□□□ -0.83
GTF2B-206ENST00000486078 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms