RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
PCDH17-202ENST00000484979 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
PCDH17-202ENST00000484979 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
PCDH17-202ENST00000484979 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.75
PCDH17-202ENST00000484979 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
PCDH17-202ENST00000484979 APLP2Q06481 763 aa25.31■■□□□ 1.64
PCDH17-202ENST00000484979 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
PCDH17-202ENST00000484979 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
PCDH17-202ENST00000484979 PELP1Q8IZL8 1130 aaKnown RBP24.61■■□□□ 1.53
PCDH17-202ENST00000484979 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
PCDH17-202ENST00000484979 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
PCDH17-202ENST00000484979 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
PCDH17-202ENST00000484979 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
PCDH17-202ENST00000484979 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
PCDH17-202ENST00000484979 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
PCDH17-202ENST00000484979 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
PCDH17-202ENST00000484979 CENPBP07199 599 aaPredicted RBP23.78■■□□□ 1.4
PCDH17-202ENST00000484979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
PCDH17-202ENST00000484979 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
PCDH17-202ENST00000484979 MYT1LQ9UL68 1186 aa23.67■■□□□ 1.38
PCDH17-202ENST00000484979 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
PCDH17-202ENST00000484979 ABCC9O60706 1549 aa23.49■■□□□ 1.35
PCDH17-202ENST00000484979 ITGAEP38570 1179 aa23.45■■□□□ 1.34
PCDH17-202ENST00000484979 NEFLP07196 543 aa23.44■■□□□ 1.34
PCDH17-202ENST00000484979 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
PCDH17-202ENST00000484979 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
PCDH17-202ENST00000484979 ERICH6Q7L0X2 663 aa23.39■■□□□ 1.33
PCDH17-202ENST00000484979 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
PCDH17-202ENST00000484979 LOC105371045A0A1W2PR82 267 aa23.25■■□□□ 1.31
PCDH17-202ENST00000484979 POLR3GLQ9BT43 218 aa23.18■■□□□ 1.3
PCDH17-202ENST00000484979 YTHDC1Q96MU7 727 aaKnown RBP23.16■■□□□ 1.3
PCDH17-202ENST00000484979 FBLN2P98095 1184 aa22.94■■□□□ 1.26
PCDH17-202ENST00000484979 FAM50AQ14320 339 aaKnown RBP22.92■■□□□ 1.26
PCDH17-202ENST00000484979 HRCP23327 699 aa22.89■■□□□ 1.26
PCDH17-202ENST00000484979 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
PCDH17-202ENST00000484979 CNGB1Q14028 1251 aaPredicted RBP22.84■■□□□ 1.25
PCDH17-202ENST00000484979 TRIM52Q96A61 297 aa22.83■■□□□ 1.24
PCDH17-202ENST00000484979 DAXXQ9UER7 740 aaPredicted RBP22.72■■□□□ 1.23
PCDH17-202ENST00000484979 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
PCDH17-202ENST00000484979 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
PCDH17-202ENST00000484979 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
PCDH17-202ENST00000484979 P3H3Q8IVL6 736 aa22.5■■□□□ 1.19
PCDH17-202ENST00000484979 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
PCDH17-202ENST00000484979 DIEXFQ68CQ4 756 aaKnown RBP22.43■■□□□ 1.18
PCDH17-202ENST00000484979 ARID3CA6NKF2 412 aa22.41■■□□□ 1.18
PCDH17-202ENST00000484979 SCRIBQ14160 1630 aa22.4■■□□□ 1.18
PCDH17-202ENST00000484979 CLSPNQ9HAW4 1339 aa22.39■■□□□ 1.18
PCDH17-202ENST00000484979 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCDH17-202ENST00000484979 BCANQ96GW7 911 aa22.35■■□□□ 1.17
PCDH17-202ENST00000484979 ZNF777Q9ULD5 760 aaPredicted RBP22.35■■□□□ 1.17
PCDH17-202ENST00000484979 ESF1Q9H501 851 aaKnown RBP22.33■■□□□ 1.17
PCDH17-202ENST00000484979 ANP32CO43423 234 aa22.28■■□□□ 1.16
PCDH17-202ENST00000484979 NEFMP07197 916 aa22.23■■□□□ 1.15
PCDH17-202ENST00000484979 ZBTB47Q9UFB7 747 aaPredicted RBP22.18■■□□□ 1.14
PCDH17-202ENST00000484979 MYT1Q01538 1121 aa22.16■■□□□ 1.14
PCDH17-202ENST00000484979 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
PCDH17-202ENST00000484979 ZNF316A6NFI3 1004 aaPredicted RBP22.11■■□□□ 1.13
PCDH17-202ENST00000484979 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
PCDH17-202ENST00000484979 SLC24A1O60721 1099 aa22.08■■□□□ 1.12
PCDH17-202ENST00000484979 CHGAP10645 457 aaKnown RBP22.04■■□□□ 1.12
PCDH17-202ENST00000484979 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
PCDH17-202ENST00000484979 TSPY4P0CV99 314 aa21.98■■□□□ 1.11
PCDH17-202ENST00000484979 TSPY10P0CW01 314 aa21.98■■□□□ 1.11
PCDH17-202ENST00000484979 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
PCDH17-202ENST00000484979 CANXP27824 592 aaKnown RBP21.97■■□□□ 1.11
PCDH17-202ENST00000484979 TONSLQ96HA7 1378 aa21.92■■□□□ 1.1
PCDH17-202ENST00000484979 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
PCDH17-202ENST00000484979 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
PCDH17-202ENST00000484979 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
PCDH17-202ENST00000484979 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
PCDH17-202ENST00000484979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.09
PCDH17-202ENST00000484979 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
PCDH17-202ENST00000484979 BCL11AQ9H165 835 aa21.77■■□□□ 1.08
PCDH17-202ENST00000484979 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
PCDH17-202ENST00000484979 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
PCDH17-202ENST00000484979 CLIP1P30622 1438 aa21.65■■□□□ 1.06
PCDH17-202ENST00000484979 GTF3C3Q9Y5Q9 886 aa21.65■■□□□ 1.06
PCDH17-202ENST00000484979 NACADO15069 1562 aa21.63■■□□□ 1.05
PCDH17-202ENST00000484979 EEA1Q15075 1411 aa21.63■■□□□ 1.05
PCDH17-202ENST00000484979 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
PCDH17-202ENST00000484979 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
PCDH17-202ENST00000484979 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
PCDH17-202ENST00000484979 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
PCDH17-202ENST00000484979 DDX10Q13206 875 aaKnown RBP21.58■■□□□ 1.04
PCDH17-202ENST00000484979 TMC1Q8TDI8 760 aa21.56■■□□□ 1.04
PCDH17-202ENST00000484979 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
PCDH17-202ENST00000484979 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
PCDH17-202ENST00000484979 HNRNPUQ00839 825 aaKnown RBP eCLIP21.52■■□□□ 1.04
PCDH17-202ENST00000484979 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
PCDH17-202ENST00000484979 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
PCDH17-202ENST00000484979 FAM9BQ8IZU0 186 aa21.5■■□□□ 1.03
PCDH17-202ENST00000484979 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
PCDH17-202ENST00000484979 CFDP1Q9UEE9 299 aaPredicted RBP21.48■■□□□ 1.03
PCDH17-202ENST00000484979 WDR43Q15061 677 aaKnown RBP eCLIP21.46■■□□□ 1.03
PCDH17-202ENST00000484979 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
PCDH17-202ENST00000484979 ANP32AP39687 249 aaKnown RBP21.43■■□□□ 1.02
PCDH17-202ENST00000484979 GOLGA3Q08378 1498 aa21.43■■□□□ 1.02
PCDH17-202ENST00000484979 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
PCDH17-202ENST00000484979 SALL2Q9Y467 1007 aaPredicted RBP21.42■■□□□ 1.02
PCDH17-202ENST00000484979 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms