RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
RPUSD3-216ENST00000484134 SHROOM4Q9ULL8 1493 aa34■■■■□ 3.03
RPUSD3-216ENST00000484134 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
RPUSD3-216ENST00000484134 HRCP23327 699 aa33.21■■■□□ 2.91
RPUSD3-216ENST00000484134 MYO15BQ96JP2 1530 aa33.15■■■□□ 2.9
RPUSD3-216ENST00000484134 ZCCHC6Q5VYS8 1495 aaKnown RBP33.09■■■□□ 2.89
RPUSD3-216ENST00000484134 CHIC1Q5VXU3 224 aa33.03■■■□□ 2.88
RPUSD3-216ENST00000484134 PCGF6Q9BYE7 350 aa32.77■■■□□ 2.84
RPUSD3-216ENST00000484134 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
RPUSD3-216ENST00000484134 PPARGC1BQ86YN6 1023 aaKnown RBP32.57■■■□□ 2.8
RPUSD3-216ENST00000484134 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
RPUSD3-216ENST00000484134 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
RPUSD3-216ENST00000484134 LOC105371045A0A1W2PR82 267 aa32.2■■■□□ 2.74
RPUSD3-216ENST00000484134 TRIM26Q12899 539 aaPredicted RBP31.87■■■□□ 2.69
RPUSD3-216ENST00000484134 ZEB1P37275 1124 aaPredicted RBP31.37■■■□□ 2.61
RPUSD3-216ENST00000484134 ABCC9O60706 1549 aa31.35■■■□□ 2.61
RPUSD3-216ENST00000484134 RSF1Q96T23 1441 aaPredicted RBP31.2■■■□□ 2.59
RPUSD3-216ENST00000484134 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
RPUSD3-216ENST00000484134 SCAF1Q9H7N4 1312 aaKnown RBP31.14■■■□□ 2.57
RPUSD3-216ENST00000484134 FAM9AQ8IZU1 332 aaPredicted RBP31.11■■■□□ 2.57
RPUSD3-216ENST00000484134 PELP1Q8IZL8 1130 aaKnown RBP31.09■■■□□ 2.57
RPUSD3-216ENST00000484134 RB1CC1Q8TDY2 1594 aa30.99■■■□□ 2.55
RPUSD3-216ENST00000484134 SCRIBQ14160 1630 aa30.94■■■□□ 2.54
RPUSD3-216ENST00000484134 EHMT2Q96KQ7 1210 aa30.92■■■□□ 2.54
RPUSD3-216ENST00000484134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.58■■■□□ 2.49
RPUSD3-216ENST00000484134 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.47
RPUSD3-216ENST00000484134 ACIN1Q9UKV3 1341 aaKnown RBP30.51■■■□□ 2.47
RPUSD3-216ENST00000484134 NEUROD1Q13562 356 aa30.48■■■□□ 2.47
RPUSD3-216ENST00000484134 CCER1Q8TC90 406 aaPredicted RBP30.45■■■□□ 2.46
RPUSD3-216ENST00000484134 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
RPUSD3-216ENST00000484134 WIZO95785 1651 aa30.3■■■□□ 2.44
RPUSD3-216ENST00000484134 DIEXFQ68CQ4 756 aaKnown RBP30.27■■■□□ 2.44
RPUSD3-216ENST00000484134 GTF3C3Q9Y5Q9 886 aa30.21■■■□□ 2.43
RPUSD3-216ENST00000484134 EIF4G1Q04637 1599 aaKnown RBP30.15■■■□□ 2.42
RPUSD3-216ENST00000484134 CENPBP07199 599 aaPredicted RBP30.1■■■□□ 2.41
RPUSD3-216ENST00000484134 TTBK1Q5TCY1 1321 aaPredicted RBP30.08■■■□□ 2.41
RPUSD3-216ENST00000484134 NACADO15069 1562 aa30.06■■■□□ 2.4
RPUSD3-216ENST00000484134 BAZ1AQ9NRL2 1556 aaPredicted RBP30.05■■■□□ 2.4
RPUSD3-216ENST00000484134 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
RPUSD3-216ENST00000484134 CCDC88BA6NC98 1476 aa29.94■■■□□ 2.38
RPUSD3-216ENST00000484134 CEP162Q5TB80 1403 aa29.94■■■□□ 2.38
RPUSD3-216ENST00000484134 ABCC8Q09428 1581 aa29.93■■■□□ 2.38
RPUSD3-216ENST00000484134 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
RPUSD3-216ENST00000484134 SOGA1O94964 1423 aa29.81■■■□□ 2.36
RPUSD3-216ENST00000484134 TNIKQ9UKE5 1360 aa29.79■■■□□ 2.36
RPUSD3-216ENST00000484134 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
RPUSD3-216ENST00000484134 YTHDC1Q96MU7 727 aaKnown RBP29.67■■■□□ 2.34
RPUSD3-216ENST00000484134 RUSC2Q8N2Y8 1516 aa29.67■■■□□ 2.34
RPUSD3-216ENST00000484134 MYT1Q01538 1121 aa29.65■■■□□ 2.34
RPUSD3-216ENST00000484134 CSRNP3Q8WYN3 585 aa29.65■■■□□ 2.34
RPUSD3-216ENST00000484134 SMARCA2P51531 1590 aa29.64■■■□□ 2.34
RPUSD3-216ENST00000484134 UBTFP17480 764 aaKnown RBP29.63■■■□□ 2.33
RPUSD3-216ENST00000484134 MIER1Q8N108 512 aa29.6■■■□□ 2.33
RPUSD3-216ENST00000484134 EEA1Q15075 1411 aa29.54■■■□□ 2.32
RPUSD3-216ENST00000484134 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
RPUSD3-216ENST00000484134 HNRNPUL2Q1KMD3 747 aaKnown RBP29.47■■■□□ 2.31
RPUSD3-216ENST00000484134 GOLGA3Q08378 1498 aa29.46■■■□□ 2.31
RPUSD3-216ENST00000484134 CLIP1P30622 1438 aa29.21■■■□□ 2.27
RPUSD3-216ENST00000484134 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.27
RPUSD3-216ENST00000484134 KIF21BO75037 1637 aa29.16■■■□□ 2.26
RPUSD3-216ENST00000484134 VPS8Q8N3P4 1428 aa29.15■■■□□ 2.26
RPUSD3-216ENST00000484134 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.26
RPUSD3-216ENST00000484134 SYNJ1O43426 1573 aa29.12■■■□□ 2.25
RPUSD3-216ENST00000484134 APLP2Q06481 763 aa29.02■■■□□ 2.24
RPUSD3-216ENST00000484134 RAPGEF2Q9Y4G8 1499 aa29.01■■■□□ 2.23
RPUSD3-216ENST00000484134 RANGAP1P46060 587 aaPredicted RBP28.98■■■□□ 2.23
RPUSD3-216ENST00000484134 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
RPUSD3-216ENST00000484134 DHX57Q6P158 1386 aaKnown RBP28.93■■■□□ 2.22
RPUSD3-216ENST00000484134 SUPT16HQ9Y5B9 1047 aaKnown RBP28.92■■■□□ 2.22
RPUSD3-216ENST00000484134 CLSPNQ9HAW4 1339 aa28.88■■■□□ 2.21
RPUSD3-216ENST00000484134 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
RPUSD3-216ENST00000484134 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
RPUSD3-216ENST00000484134 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
RPUSD3-216ENST00000484134 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
RPUSD3-216ENST00000484134 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
RPUSD3-216ENST00000484134 TSHZ2Q9NRE2 1034 aa28.67■■■□□ 2.18
RPUSD3-216ENST00000484134 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
RPUSD3-216ENST00000484134 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
RPUSD3-216ENST00000484134 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
RPUSD3-216ENST00000484134 PRXQ9BXM0 1461 aa28.57■■■□□ 2.16
RPUSD3-216ENST00000484134 KCNH8Q96L42 1107 aa28.57■■■□□ 2.16
RPUSD3-216ENST00000484134 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
RPUSD3-216ENST00000484134 CUX2O14529 1486 aa28.52■■■□□ 2.16
RPUSD3-216ENST00000484134 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
RPUSD3-216ENST00000484134 CCNB3Q8WWL7 1395 aa28.44■■■□□ 2.14
RPUSD3-216ENST00000484134 ITGAEP38570 1179 aa28.42■■■□□ 2.14
RPUSD3-216ENST00000484134 ANP32EQ9BTT0 268 aa28.41■■■□□ 2.14
RPUSD3-216ENST00000484134 MAPKBP1O60336 1514 aa28.34■■■□□ 2.13
RPUSD3-216ENST00000484134 RAB3GAP2Q9H2M9 1393 aa28.33■■■□□ 2.13
RPUSD3-216ENST00000484134 BCANQ96GW7 911 aa28.33■■■□□ 2.13
RPUSD3-216ENST00000484134 ARHGAP35Q9NRY4 1499 aa28.31■■■□□ 2.12
RPUSD3-216ENST00000484134 CUX1P39880 1505 aa28.26■■■□□ 2.11
RPUSD3-216ENST00000484134 FKBP8Q14318 412 aa28.25■■■□□ 2.11
RPUSD3-216ENST00000484134 DDX10Q13206 875 aaKnown RBP28.24■■■□□ 2.11
RPUSD3-216ENST00000484134 KIF27Q86VH2 1401 aa28.23■■■□□ 2.11
RPUSD3-216ENST00000484134 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
RPUSD3-216ENST00000484134 SIN3AQ96ST3 1273 aa28.17■■■□□ 2.1
RPUSD3-216ENST00000484134 SETD5Q9C0A6 1442 aa28.14■■■□□ 2.1
RPUSD3-216ENST00000484134 PPP1R15AO75807 674 aaPredicted RBP28.13■■■□□ 2.09
RPUSD3-216ENST00000484134 TIAM1Q13009 1591 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms