RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
C9orf78-205ENST00000480023 HRCP23327 699 aa22.89■■□□□ 1.25
C9orf78-205ENST00000480023 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
C9orf78-205ENST00000480023 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.21
C9orf78-205ENST00000480023 MYO15BQ96JP2 1530 aa22.56■■□□□ 1.2
C9orf78-205ENST00000480023 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
C9orf78-205ENST00000480023 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
C9orf78-205ENST00000480023 PCGF6Q9BYE7 350 aa22.32■■□□□ 1.16
C9orf78-205ENST00000480023 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
C9orf78-205ENST00000480023 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
C9orf78-205ENST00000480023 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
C9orf78-205ENST00000480023 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
C9orf78-205ENST00000480023 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
C9orf78-205ENST00000480023 LOC105371045A0A1W2PR82 267 aa21.71■■□□□ 1.07
C9orf78-205ENST00000480023 ZEB1P37275 1124 aaPredicted RBP21.7■■□□□ 1.06
C9orf78-205ENST00000480023 SCAF1Q9H7N4 1312 aaKnown RBP21.47■■□□□ 1.03
C9orf78-205ENST00000480023 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
C9orf78-205ENST00000480023 ABCC9O60706 1549 aa21.36■■□□□ 1.01
C9orf78-205ENST00000480023 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
C9orf78-205ENST00000480023 MYT1Q01538 1121 aa21.1■□□□□ 0.97
C9orf78-205ENST00000480023 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
C9orf78-205ENST00000480023 ACIN1Q9UKV3 1341 aaKnown RBP21.06■□□□□ 0.96
C9orf78-205ENST00000480023 RB1CC1Q8TDY2 1594 aa21.04■□□□□ 0.96
C9orf78-205ENST00000480023 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
C9orf78-205ENST00000480023 FAM9AQ8IZU1 332 aaPredicted RBP20.85■□□□□ 0.93
C9orf78-205ENST00000480023 CENPBP07199 599 aaPredicted RBP20.83■□□□□ 0.92
C9orf78-205ENST00000480023 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
C9orf78-205ENST00000480023 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
C9orf78-205ENST00000480023 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
C9orf78-205ENST00000480023 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
C9orf78-205ENST00000480023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
C9orf78-205ENST00000480023 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
C9orf78-205ENST00000480023 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.89
C9orf78-205ENST00000480023 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
C9orf78-205ENST00000480023 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
C9orf78-205ENST00000480023 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
C9orf78-205ENST00000480023 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
C9orf78-205ENST00000480023 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
C9orf78-205ENST00000480023 WIZO95785 1651 aa20.45■□□□□ 0.86
C9orf78-205ENST00000480023 CEP162Q5TB80 1403 aa20.38■□□□□ 0.85
C9orf78-205ENST00000480023 NACADO15069 1562 aa20.34■□□□□ 0.85
C9orf78-205ENST00000480023 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.84
C9orf78-205ENST00000480023 EEA1Q15075 1411 aa20.24■□□□□ 0.83
C9orf78-205ENST00000480023 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
C9orf78-205ENST00000480023 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
C9orf78-205ENST00000480023 MIER1Q8N108 512 aa20.2■□□□□ 0.82
C9orf78-205ENST00000480023 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
C9orf78-205ENST00000480023 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
C9orf78-205ENST00000480023 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.81
C9orf78-205ENST00000480023 SOGA1O94964 1423 aa20.13■□□□□ 0.81
C9orf78-205ENST00000480023 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
C9orf78-205ENST00000480023 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
C9orf78-205ENST00000480023 SMARCA2P51531 1590 aa20.08■□□□□ 0.81
C9orf78-205ENST00000480023 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
C9orf78-205ENST00000480023 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
C9orf78-205ENST00000480023 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
C9orf78-205ENST00000480023 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
C9orf78-205ENST00000480023 KIF21BO75037 1637 aa19.95■□□□□ 0.78
C9orf78-205ENST00000480023 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
C9orf78-205ENST00000480023 SUPT16HQ9Y5B9 1047 aaKnown RBP19.9■□□□□ 0.78
C9orf78-205ENST00000480023 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.77
C9orf78-205ENST00000480023 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
C9orf78-205ENST00000480023 CLIP1P30622 1438 aa19.85■□□□□ 0.77
C9orf78-205ENST00000480023 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.77
C9orf78-205ENST00000480023 TSHZ2Q9NRE2 1034 aa19.76■□□□□ 0.75
C9orf78-205ENST00000480023 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
C9orf78-205ENST00000480023 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
C9orf78-205ENST00000480023 SYNJ1O43426 1573 aa19.71■□□□□ 0.75
C9orf78-205ENST00000480023 APLP2Q06481 763 aa19.68■□□□□ 0.74
C9orf78-205ENST00000480023 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
C9orf78-205ENST00000480023 RAPGEF2Q9Y4G8 1499 aa19.63■□□□□ 0.73
C9orf78-205ENST00000480023 CUX2O14529 1486 aa19.62■□□□□ 0.73
C9orf78-205ENST00000480023 UNC13AQ9UPW8 1703 aa19.6■□□□□ 0.73
C9orf78-205ENST00000480023 RRBP1Q9P2E9 1410 aaKnown RBP19.56■□□□□ 0.72
C9orf78-205ENST00000480023 ERICH3Q5RHP9 1530 aa19.52■□□□□ 0.72
C9orf78-205ENST00000480023 BCL11AQ9H165 835 aa19.52■□□□□ 0.72
C9orf78-205ENST00000480023 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
C9orf78-205ENST00000480023 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
C9orf78-205ENST00000480023 PRXQ9BXM0 1461 aa19.43■□□□□ 0.7
C9orf78-205ENST00000480023 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
C9orf78-205ENST00000480023 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
C9orf78-205ENST00000480023 MAPKBP1O60336 1514 aa19.37■□□□□ 0.69
C9orf78-205ENST00000480023 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
C9orf78-205ENST00000480023 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
C9orf78-205ENST00000480023 FKBP8Q14318 412 aa19.33■□□□□ 0.68
C9orf78-205ENST00000480023 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
C9orf78-205ENST00000480023 RBM19Q9Y4C8 960 aaKnown RBP19.3■□□□□ 0.68
C9orf78-205ENST00000480023 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
C9orf78-205ENST00000480023 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
C9orf78-205ENST00000480023 BCANQ96GW7 911 aa19.28■□□□□ 0.68
C9orf78-205ENST00000480023 RAB3GAP2Q9H2M9 1393 aa19.27■□□□□ 0.67
C9orf78-205ENST00000480023 NEFLP07196 543 aa19.24■□□□□ 0.67
C9orf78-205ENST00000480023 CCER2I3L3R5 266 aa19.23■□□□□ 0.67
C9orf78-205ENST00000480023 MAP3K1Q13233 1512 aa19.23■□□□□ 0.67
C9orf78-205ENST00000480023 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
C9orf78-205ENST00000480023 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
C9orf78-205ENST00000480023 ARHGAP35Q9NRY4 1499 aa19.21■□□□□ 0.67
C9orf78-205ENST00000480023 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
C9orf78-205ENST00000480023 SETD5Q9C0A6 1442 aa19.18■□□□□ 0.66
C9orf78-205ENST00000480023 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms