RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 NISCHQ9Y2I1 1504 aa40.17■■■■■ 4.02
COL13A1-208ENST00000479733 SHROOM4Q9ULL8 1493 aa35.62■■■■□ 3.29
COL13A1-208ENST00000479733 SUPT5HO00267 1087 aaKnown RBP35.34■■■■□ 3.25
COL13A1-208ENST00000479733 HRCP23327 699 aa34.75■■■■□ 3.15
COL13A1-208ENST00000479733 PCGF6Q9BYE7 350 aa34.48■■■■□ 3.11
COL13A1-208ENST00000479733 MYO15BQ96JP2 1530 aa34.47■■■■□ 3.11
COL13A1-208ENST00000479733 CHIC1Q5VXU3 224 aa34.42■■■■□ 3.1
COL13A1-208ENST00000479733 PPARGC1BQ86YN6 1023 aaKnown RBP34.27■■■■□ 3.08
COL13A1-208ENST00000479733 ZCCHC6Q5VYS8 1495 aaKnown RBP34.06■■■■□ 3.04
COL13A1-208ENST00000479733 DCAF8L2P0C7V8 631 aa34.03■■■■□ 3.04
COL13A1-208ENST00000479733 LOC105371045A0A1W2PR82 267 aa33.75■■■□□ 2.99
COL13A1-208ENST00000479733 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
COL13A1-208ENST00000479733 DCAF1Q9Y4B6 1507 aa33.45■■■□□ 2.95
COL13A1-208ENST00000479733 TRIM26Q12899 539 aaPredicted RBP33.31■■■□□ 2.92
COL13A1-208ENST00000479733 ZEB1P37275 1124 aaPredicted RBP32.79■■■□□ 2.84
COL13A1-208ENST00000479733 FAM9AQ8IZU1 332 aaPredicted RBP32.75■■■□□ 2.83
COL13A1-208ENST00000479733 EHMT2Q96KQ7 1210 aa32.74■■■□□ 2.83
COL13A1-208ENST00000479733 SCAF1Q9H7N4 1312 aaKnown RBP32.69■■■□□ 2.82
COL13A1-208ENST00000479733 PELP1Q8IZL8 1130 aaKnown RBP32.64■■■□□ 2.82
COL13A1-208ENST00000479733 TRIM41Q8WV44 630 aa32.63■■■□□ 2.81
COL13A1-208ENST00000479733 RSF1Q96T23 1441 aaPredicted RBP32.27■■■□□ 2.76
COL13A1-208ENST00000479733 ABCC9O60706 1549 aa32.26■■■□□ 2.75
COL13A1-208ENST00000479733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.13■■■□□ 2.73
COL13A1-208ENST00000479733 RB1CC1Q8TDY2 1594 aa32.06■■■□□ 2.72
COL13A1-208ENST00000479733 SCRIBQ14160 1630 aa32.02■■■□□ 2.72
COL13A1-208ENST00000479733 CCER1Q8TC90 406 aaPredicted RBP32.02■■■□□ 2.72
COL13A1-208ENST00000479733 NEUROD1Q13562 356 aa32■■■□□ 2.71
COL13A1-208ENST00000479733 ACIN1Q9UKV3 1341 aaKnown RBP31.99■■■□□ 2.71
COL13A1-208ENST00000479733 TTBK1Q5TCY1 1321 aaPredicted RBP31.83■■■□□ 2.69
COL13A1-208ENST00000479733 GTF3C3Q9Y5Q9 886 aa31.8■■■□□ 2.68
COL13A1-208ENST00000479733 DIEXFQ68CQ4 756 aaKnown RBP31.77■■■□□ 2.68
COL13A1-208ENST00000479733 CENPBP07199 599 aaPredicted RBP31.65■■■□□ 2.66
COL13A1-208ENST00000479733 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
COL13A1-208ENST00000479733 MROH2BQ7Z745 1585 aa31.44■■■□□ 2.62
COL13A1-208ENST00000479733 YTHDC1Q96MU7 727 aaKnown RBP31.38■■■□□ 2.61
COL13A1-208ENST00000479733 WIZO95785 1651 aa31.3■■■□□ 2.6
COL13A1-208ENST00000479733 NACADO15069 1562 aa31.28■■■□□ 2.6
COL13A1-208ENST00000479733 ZNF316A6NFI3 1004 aaPredicted RBP31.21■■■□□ 2.59
COL13A1-208ENST00000479733 MYT1Q01538 1121 aa31.14■■■□□ 2.58
COL13A1-208ENST00000479733 CEP162Q5TB80 1403 aa31.12■■■□□ 2.57
COL13A1-208ENST00000479733 UBTFP17480 764 aaKnown RBP31.08■■■□□ 2.57
COL13A1-208ENST00000479733 CCDC88BA6NC98 1476 aa31.06■■■□□ 2.56
COL13A1-208ENST00000479733 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
COL13A1-208ENST00000479733 WRNQ14191 1432 aaPredicted RBP eCLIP31.05■■■□□ 2.56
COL13A1-208ENST00000479733 MIER1Q8N108 512 aa31.04■■■□□ 2.56
COL13A1-208ENST00000479733 SOGA1O94964 1423 aa30.97■■■□□ 2.55
COL13A1-208ENST00000479733 HNRNPUL2Q1KMD3 747 aaKnown RBP30.97■■■□□ 2.55
COL13A1-208ENST00000479733 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
COL13A1-208ENST00000479733 EIF4G1Q04637 1599 aaKnown RBP30.91■■■□□ 2.54
COL13A1-208ENST00000479733 TNIKQ9UKE5 1360 aa30.88■■■□□ 2.53
COL13A1-208ENST00000479733 CSRNP3Q8WYN3 585 aa30.87■■■□□ 2.53
COL13A1-208ENST00000479733 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
COL13A1-208ENST00000479733 RANGAP1P46060 587 aaPredicted RBP30.62■■■□□ 2.49
COL13A1-208ENST00000479733 TOP2AP11388 1531 aaKnown RBP30.6■■■□□ 2.49
COL13A1-208ENST00000479733 GOLGA3Q08378 1498 aa30.55■■■□□ 2.48
COL13A1-208ENST00000479733 SMARCA2P51531 1590 aa30.54■■■□□ 2.48
COL13A1-208ENST00000479733 EEA1Q15075 1411 aa30.53■■■□□ 2.48
COL13A1-208ENST00000479733 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
COL13A1-208ENST00000479733 APLP2Q06481 763 aa30.48■■■□□ 2.47
COL13A1-208ENST00000479733 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
COL13A1-208ENST00000479733 CLIP1P30622 1438 aa30.38■■■□□ 2.45
COL13A1-208ENST00000479733 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
COL13A1-208ENST00000479733 SUPT16HQ9Y5B9 1047 aaKnown RBP30.32■■■□□ 2.44
COL13A1-208ENST00000479733 CEP164Q9UPV0 1460 aa30.26■■■□□ 2.43
COL13A1-208ENST00000479733 VPS8Q8N3P4 1428 aa30.24■■■□□ 2.43
COL13A1-208ENST00000479733 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
COL13A1-208ENST00000479733 RAPGEF2Q9Y4G8 1499 aa30.1■■■□□ 2.41
COL13A1-208ENST00000479733 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
COL13A1-208ENST00000479733 SYNJ1O43426 1573 aa30.06■■■□□ 2.4
COL13A1-208ENST00000479733 TSHZ2Q9NRE2 1034 aa30.05■■■□□ 2.4
COL13A1-208ENST00000479733 KIF21BO75037 1637 aa30.04■■■□□ 2.4
COL13A1-208ENST00000479733 CLSPNQ9HAW4 1339 aa30.02■■■□□ 2.4
COL13A1-208ENST00000479733 KCNH8Q96L42 1107 aa29.98■■■□□ 2.39
COL13A1-208ENST00000479733 KANK4Q5T7N3 995 aaPredicted RBP29.97■■■□□ 2.39
COL13A1-208ENST00000479733 ITGAEP38570 1179 aa29.95■■■□□ 2.39
COL13A1-208ENST00000479733 BCANQ96GW7 911 aa29.95■■■□□ 2.38
COL13A1-208ENST00000479733 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
COL13A1-208ENST00000479733 ANP32EQ9BTT0 268 aa29.84■■■□□ 2.37
COL13A1-208ENST00000479733 FKBP8Q14318 412 aa29.72■■■□□ 2.35
COL13A1-208ENST00000479733 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
COL13A1-208ENST00000479733 DDX10Q13206 875 aaKnown RBP29.65■■■□□ 2.34
COL13A1-208ENST00000479733 CCNB3Q8WWL7 1395 aa29.59■■■□□ 2.33
COL13A1-208ENST00000479733 RRBP1Q9P2E9 1410 aaKnown RBP29.58■■■□□ 2.33
COL13A1-208ENST00000479733 HIRIP3Q9BW71 556 aaPredicted RBP29.54■■■□□ 2.32
COL13A1-208ENST00000479733 ATAD2BQ9ULI0 1458 aa29.53■■■□□ 2.32
COL13A1-208ENST00000479733 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
COL13A1-208ENST00000479733 RAB3GAP2Q9H2M9 1393 aa29.51■■■□□ 2.31
COL13A1-208ENST00000479733 SIN3AQ96ST3 1273 aa29.51■■■□□ 2.31
COL13A1-208ENST00000479733 PRXQ9BXM0 1461 aa29.5■■■□□ 2.31
COL13A1-208ENST00000479733 TRIM52Q96A61 297 aa29.49■■■□□ 2.31
COL13A1-208ENST00000479733 BCL11AQ9H165 835 aa29.48■■■□□ 2.31
COL13A1-208ENST00000479733 TOP2BQ02880 1626 aa29.46■■■□□ 2.31
COL13A1-208ENST00000479733 NEFLP07196 543 aa29.44■■■□□ 2.3
COL13A1-208ENST00000479733 RBM19Q9Y4C8 960 aaKnown RBP29.42■■■□□ 2.3
COL13A1-208ENST00000479733 ERICH3Q5RHP9 1530 aa29.41■■■□□ 2.3
COL13A1-208ENST00000479733 CUX2O14529 1486 aa29.41■■■□□ 2.3
COL13A1-208ENST00000479733 MAPKBP1O60336 1514 aa29.36■■■□□ 2.29
COL13A1-208ENST00000479733 FAM50AQ14320 339 aaKnown RBP29.36■■■□□ 2.29
COL13A1-208ENST00000479733 WDR97A6NE52 1622 aa29.31■■■□□ 2.28
COL13A1-208ENST00000479733 ARHGAP35Q9NRY4 1499 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms