RNA–Protein interactions for RNA: ENST00000479412.2

NOTCH2-203, Transcript of notch 2, humanhuman

TSL 1 (best)

Gene NOTCH2, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-203ENST00000479412 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
NOTCH2-203ENST00000479412 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
NOTCH2-203ENST00000479412 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
NOTCH2-203ENST00000479412 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.46
NOTCH2-203ENST00000479412 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
NOTCH2-203ENST00000479412 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
NOTCH2-203ENST00000479412 ABCC9O60706 1549 aa23.68■■□□□ 1.38
NOTCH2-203ENST00000479412 SCRIBQ14160 1630 aa23.16■■□□□ 1.3
NOTCH2-203ENST00000479412 HRCP23327 699 aa23.06■■□□□ 1.28
NOTCH2-203ENST00000479412 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
NOTCH2-203ENST00000479412 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
NOTCH2-203ENST00000479412 PCGF6Q9BYE7 350 aa22.8■■□□□ 1.24
NOTCH2-203ENST00000479412 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
NOTCH2-203ENST00000479412 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
NOTCH2-203ENST00000479412 PELP1Q8IZL8 1130 aaKnown RBP22.66■■□□□ 1.22
NOTCH2-203ENST00000479412 NACADO15069 1562 aa22.63■■□□□ 1.21
NOTCH2-203ENST00000479412 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
NOTCH2-203ENST00000479412 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
NOTCH2-203ENST00000479412 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
NOTCH2-203ENST00000479412 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
NOTCH2-203ENST00000479412 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
NOTCH2-203ENST00000479412 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
NOTCH2-203ENST00000479412 LOC105371045A0A1W2PR82 267 aa22.35■■□□□ 1.17
NOTCH2-203ENST00000479412 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
NOTCH2-203ENST00000479412 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
NOTCH2-203ENST00000479412 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
NOTCH2-203ENST00000479412 WIZO95785 1651 aa22.17■■□□□ 1.14
NOTCH2-203ENST00000479412 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
NOTCH2-203ENST00000479412 BAZ1AQ9NRL2 1556 aaPredicted RBP21.92■■□□□ 1.1
NOTCH2-203ENST00000479412 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
NOTCH2-203ENST00000479412 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
NOTCH2-203ENST00000479412 MYT1Q01538 1121 aa21.8■■□□□ 1.08
NOTCH2-203ENST00000479412 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
NOTCH2-203ENST00000479412 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
NOTCH2-203ENST00000479412 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
NOTCH2-203ENST00000479412 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
NOTCH2-203ENST00000479412 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
NOTCH2-203ENST00000479412 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
NOTCH2-203ENST00000479412 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
NOTCH2-203ENST00000479412 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
NOTCH2-203ENST00000479412 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
NOTCH2-203ENST00000479412 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
NOTCH2-203ENST00000479412 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
NOTCH2-203ENST00000479412 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
NOTCH2-203ENST00000479412 ZEB1P37275 1124 aaPredicted RBP21.42■■□□□ 1.02
NOTCH2-203ENST00000479412 SOGA1O94964 1423 aa21.37■■□□□ 1.01
NOTCH2-203ENST00000479412 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
NOTCH2-203ENST00000479412 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
NOTCH2-203ENST00000479412 RUSC2Q8N2Y8 1516 aa21.31■■□□□ 1
NOTCH2-203ENST00000479412 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
NOTCH2-203ENST00000479412 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
NOTCH2-203ENST00000479412 CENPBP07199 599 aaPredicted RBP21.19■□□□□ 0.98
NOTCH2-203ENST00000479412 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
NOTCH2-203ENST00000479412 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
NOTCH2-203ENST00000479412 YTHDC1Q96MU7 727 aaKnown RBP21.11■□□□□ 0.97
NOTCH2-203ENST00000479412 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
NOTCH2-203ENST00000479412 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
NOTCH2-203ENST00000479412 DIEXFQ68CQ4 756 aaKnown RBP20.99■□□□□ 0.95
NOTCH2-203ENST00000479412 CC2D2AQ9P2K1 1620 aa20.99■□□□□ 0.95
NOTCH2-203ENST00000479412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
NOTCH2-203ENST00000479412 CCER1Q8TC90 406 aaPredicted RBP20.93■□□□□ 0.94
NOTCH2-203ENST00000479412 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
NOTCH2-203ENST00000479412 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
NOTCH2-203ENST00000479412 NESP48681 1621 aa20.87■□□□□ 0.93
NOTCH2-203ENST00000479412 CADPSQ9ULU8 1353 aa20.81■□□□□ 0.92
NOTCH2-203ENST00000479412 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
NOTCH2-203ENST00000479412 CFTRP13569 1480 aa20.78■□□□□ 0.92
NOTCH2-203ENST00000479412 CUX1P39880 1505 aa20.77■□□□□ 0.92
NOTCH2-203ENST00000479412 BCL11AQ9H165 835 aa20.76■□□□□ 0.91
NOTCH2-203ENST00000479412 GOLGA3Q08378 1498 aa20.75■□□□□ 0.91
NOTCH2-203ENST00000479412 TNIKQ9UKE5 1360 aa20.75■□□□□ 0.91
NOTCH2-203ENST00000479412 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
NOTCH2-203ENST00000479412 EEA1Q15075 1411 aa20.7■□□□□ 0.9
NOTCH2-203ENST00000479412 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
NOTCH2-203ENST00000479412 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
NOTCH2-203ENST00000479412 APLP2Q06481 763 aa20.67■□□□□ 0.9
NOTCH2-203ENST00000479412 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
NOTCH2-203ENST00000479412 CLIP1P30622 1438 aa20.67■□□□□ 0.9
NOTCH2-203ENST00000479412 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
NOTCH2-203ENST00000479412 CUX2O14529 1486 aa20.65■□□□□ 0.9
NOTCH2-203ENST00000479412 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
NOTCH2-203ENST00000479412 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
NOTCH2-203ENST00000479412 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
NOTCH2-203ENST00000479412 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
NOTCH2-203ENST00000479412 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
NOTCH2-203ENST00000479412 ITGAEP38570 1179 aa20.49■□□□□ 0.87
NOTCH2-203ENST00000479412 BIVM-ERCC5R4GMW8 1640 aa20.48■□□□□ 0.87
NOTCH2-203ENST00000479412 IGF1RP08069 1367 aa20.46■□□□□ 0.87
NOTCH2-203ENST00000479412 MIER1Q8N108 512 aa20.45■□□□□ 0.86
NOTCH2-203ENST00000479412 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
NOTCH2-203ENST00000479412 CARMIL1Q5VZK9 1371 aa20.43■□□□□ 0.86
NOTCH2-203ENST00000479412 ANP32EQ9BTT0 268 aa20.42■□□□□ 0.86
NOTCH2-203ENST00000479412 KIF21BO75037 1637 aa20.42■□□□□ 0.86
NOTCH2-203ENST00000479412 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
NOTCH2-203ENST00000479412 ARID3CA6NKF2 412 aa20.39■□□□□ 0.85
NOTCH2-203ENST00000479412 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
NOTCH2-203ENST00000479412 ZNF316A6NFI3 1004 aaPredicted RBP20.37■□□□□ 0.85
NOTCH2-203ENST00000479412 TOPBP1Q92547 1522 aa20.37■□□□□ 0.85
NOTCH2-203ENST00000479412 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
NOTCH2-203ENST00000479412 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms