RNA–Protein interactions for RNA: ENST00000477338.5

ATP1A4-206, Transcript of ATPase Na+/K+ transporting subunit alpha 4, humanhuman

TSL 1 (best)

Gene ATP1A4, Length 3,800 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A4-206ENST00000477338 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
ATP1A4-206ENST00000477338 SHROOM4Q9ULL8 1493 aa13.53□□□□□ -0.24
ATP1A4-206ENST00000477338 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
ATP1A4-206ENST00000477338 HRCP23327 699 aa13.45□□□□□ -0.26
ATP1A4-206ENST00000477338 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
ATP1A4-206ENST00000477338 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
ATP1A4-206ENST00000477338 MYO15BQ96JP2 1530 aa13.22□□□□□ -0.29
ATP1A4-206ENST00000477338 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
ATP1A4-206ENST00000477338 CHIC1Q5VXU3 224 aa12.96□□□□□ -0.33
ATP1A4-206ENST00000477338 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
ATP1A4-206ENST00000477338 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
ATP1A4-206ENST00000477338 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
ATP1A4-206ENST00000477338 DCAF1Q9Y4B6 1507 aa12.73□□□□□ -0.37
ATP1A4-206ENST00000477338 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
ATP1A4-206ENST00000477338 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
ATP1A4-206ENST00000477338 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
ATP1A4-206ENST00000477338 ZCCHC6Q5VYS8 1495 aaKnown RBP12.57□□□□□ -0.4
ATP1A4-206ENST00000477338 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
ATP1A4-206ENST00000477338 NEUROD1Q13562 356 aa12.47□□□□□ -0.41
ATP1A4-206ENST00000477338 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
ATP1A4-206ENST00000477338 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
ATP1A4-206ENST00000477338 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
ATP1A4-206ENST00000477338 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
ATP1A4-206ENST00000477338 MYT1Q01538 1121 aa12.27□□□□□ -0.44
ATP1A4-206ENST00000477338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
ATP1A4-206ENST00000477338 ABCC9O60706 1549 aa12.18□□□□□ -0.46
ATP1A4-206ENST00000477338 TTBK1Q5TCY1 1321 aaPredicted RBP12.18□□□□□ -0.46
ATP1A4-206ENST00000477338 DIEXFQ68CQ4 756 aaKnown RBP12.14□□□□□ -0.47
ATP1A4-206ENST00000477338 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
ATP1A4-206ENST00000477338 CENPBP07199 599 aaPredicted RBP12.07□□□□□ -0.48
ATP1A4-206ENST00000477338 CCER1Q8TC90 406 aaPredicted RBP12.05□□□□□ -0.48
ATP1A4-206ENST00000477338 YTHDC1Q96MU7 727 aaKnown RBP12.01□□□□□ -0.49
ATP1A4-206ENST00000477338 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
ATP1A4-206ENST00000477338 RB1CC1Q8TDY2 1594 aa11.94□□□□□ -0.5
ATP1A4-206ENST00000477338 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
ATP1A4-206ENST00000477338 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
ATP1A4-206ENST00000477338 MIER1Q8N108 512 aa11.91□□□□□ -0.5
ATP1A4-206ENST00000477338 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
ATP1A4-206ENST00000477338 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
ATP1A4-206ENST00000477338 CECR2Q9BXF3 1484 aa11.86□□□□□ -0.51
ATP1A4-206ENST00000477338 BCL11AQ9H165 835 aa11.81□□□□□ -0.52
ATP1A4-206ENST00000477338 TSHZ2Q9NRE2 1034 aa11.74□□□□□ -0.53
ATP1A4-206ENST00000477338 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
ATP1A4-206ENST00000477338 MROH2BQ7Z745 1585 aa11.72□□□□□ -0.53
ATP1A4-206ENST00000477338 ANP32EQ9BTT0 268 aa11.71□□□□□ -0.53
ATP1A4-206ENST00000477338 APLP2Q06481 763 aa11.71□□□□□ -0.53
ATP1A4-206ENST00000477338 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
ATP1A4-206ENST00000477338 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
ATP1A4-206ENST00000477338 NACADO15069 1562 aa11.66□□□□□ -0.54
ATP1A4-206ENST00000477338 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
ATP1A4-206ENST00000477338 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
ATP1A4-206ENST00000477338 WIZO95785 1651 aa11.61□□□□□ -0.55
ATP1A4-206ENST00000477338 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.55
ATP1A4-206ENST00000477338 ABCC8Q09428 1581 aa11.56□□□□□ -0.56
ATP1A4-206ENST00000477338 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
ATP1A4-206ENST00000477338 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
ATP1A4-206ENST00000477338 SOGA1O94964 1423 aa11.52□□□□□ -0.57
ATP1A4-206ENST00000477338 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
ATP1A4-206ENST00000477338 BAZ1AQ9NRL2 1556 aaPredicted RBP11.51□□□□□ -0.57
ATP1A4-206ENST00000477338 BCANQ96GW7 911 aa11.5□□□□□ -0.57
ATP1A4-206ENST00000477338 ITGAEP38570 1179 aa11.49□□□□□ -0.57
ATP1A4-206ENST00000477338 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
ATP1A4-206ENST00000477338 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
ATP1A4-206ENST00000477338 CLSPNQ9HAW4 1339 aa11.44□□□□□ -0.58
ATP1A4-206ENST00000477338 MSH5O43196 834 aa11.43□□□□□ -0.58
ATP1A4-206ENST00000477338 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
ATP1A4-206ENST00000477338 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
ATP1A4-206ENST00000477338 FKBP8Q14318 412 aa11.37□□□□□ -0.59
ATP1A4-206ENST00000477338 DHX57Q6P158 1386 aaKnown RBP11.36□□□□□ -0.59
ATP1A4-206ENST00000477338 TOP2AP11388 1531 aaKnown RBP11.35□□□□□ -0.59
ATP1A4-206ENST00000477338 SMARCA4P51532 1647 aa11.33□□□□□ -0.6
ATP1A4-206ENST00000477338 CLIP1P30622 1438 aa11.32□□□□□ -0.6
ATP1A4-206ENST00000477338 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
ATP1A4-206ENST00000477338 SMARCA2P51531 1590 aa11.28□□□□□ -0.6
ATP1A4-206ENST00000477338 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
ATP1A4-206ENST00000477338 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
ATP1A4-206ENST00000477338 EEA1Q15075 1411 aa11.28□□□□□ -0.6
ATP1A4-206ENST00000477338 VPS8Q8N3P4 1428 aa11.24□□□□□ -0.61
ATP1A4-206ENST00000477338 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
ATP1A4-206ENST00000477338 FAM50AQ14320 339 aaKnown RBP11.22□□□□□ -0.61
ATP1A4-206ENST00000477338 TRIM52Q96A61 297 aa11.21□□□□□ -0.61
ATP1A4-206ENST00000477338 KIF21BO75037 1637 aa11.19□□□□□ -0.62
ATP1A4-206ENST00000477338 KANK4Q5T7N3 995 aaPredicted RBP11.19□□□□□ -0.62
ATP1A4-206ENST00000477338 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
ATP1A4-206ENST00000477338 ATAD2BQ9ULI0 1458 aa11.18□□□□□ -0.62
ATP1A4-206ENST00000477338 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
ATP1A4-206ENST00000477338 HIRIP3Q9BW71 556 aaPredicted RBP11.15□□□□□ -0.62
ATP1A4-206ENST00000477338 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.62
ATP1A4-206ENST00000477338 IRX6P78412 446 aaPredicted RBP11.14□□□□□ -0.63
ATP1A4-206ENST00000477338 MAPKBP1O60336 1514 aa11.14□□□□□ -0.63
ATP1A4-206ENST00000477338 SYNJ1O43426 1573 aa11.14□□□□□ -0.63
ATP1A4-206ENST00000477338 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
ATP1A4-206ENST00000477338 PPP1R15AO75807 674 aaPredicted RBP11.13□□□□□ -0.63
ATP1A4-206ENST00000477338 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
ATP1A4-206ENST00000477338 DEKP35659 375 aaKnown RBP11.12□□□□□ -0.63
ATP1A4-206ENST00000477338 NEFLP07196 543 aa11.09□□□□□ -0.63
ATP1A4-206ENST00000477338 CUX2O14529 1486 aa11.08□□□□□ -0.64
ATP1A4-206ENST00000477338 SIN3AQ96ST3 1273 aa11.08□□□□□ -0.64
ATP1A4-206ENST00000477338 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
ATP1A4-206ENST00000477338 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms