RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
KPNA1-206ENST00000476916 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
KPNA1-206ENST00000476916 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
KPNA1-206ENST00000476916 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
KPNA1-206ENST00000476916 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
KPNA1-206ENST00000476916 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
KPNA1-206ENST00000476916 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
KPNA1-206ENST00000476916 ABCC9O60706 1549 aa18.59■□□□□ 0.57
KPNA1-206ENST00000476916 ADRA2BP18089 450 aa18.49■□□□□ 0.55
KPNA1-206ENST00000476916 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
KPNA1-206ENST00000476916 FOXD1Q16676 465 aa18.32■□□□□ 0.52
KPNA1-206ENST00000476916 KCNA4P22459 653 aa18.13■□□□□ 0.49
KPNA1-206ENST00000476916 NISCHQ9Y2I1 1504 aa17.92■□□□□ 0.46
KPNA1-206ENST00000476916 EHMT2Q96KQ7 1210 aa17.88■□□□□ 0.45
KPNA1-206ENST00000476916 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
KPNA1-206ENST00000476916 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
KPNA1-206ENST00000476916 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
KPNA1-206ENST00000476916 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
KPNA1-206ENST00000476916 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
KPNA1-206ENST00000476916 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
KPNA1-206ENST00000476916 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
KPNA1-206ENST00000476916 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
KPNA1-206ENST00000476916 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
KPNA1-206ENST00000476916 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
KPNA1-206ENST00000476916 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
KPNA1-206ENST00000476916 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
KPNA1-206ENST00000476916 CUX2O14529 1486 aa16.77■□□□□ 0.28
KPNA1-206ENST00000476916 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
KPNA1-206ENST00000476916 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
KPNA1-206ENST00000476916 ZBTB22O15209 634 aa16.71■□□□□ 0.27
KPNA1-206ENST00000476916 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
KPNA1-206ENST00000476916 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
KPNA1-206ENST00000476916 BICRAQ9NZM4 1560 aa16.53■□□□□ 0.24
KPNA1-206ENST00000476916 MSH5O43196 834 aa16.52■□□□□ 0.24
KPNA1-206ENST00000476916 ILDR1Q86SU0 546 aaPredicted RBP16.44■□□□□ 0.22
KPNA1-206ENST00000476916 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
KPNA1-206ENST00000476916 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
KPNA1-206ENST00000476916 NACADO15069 1562 aa16.35■□□□□ 0.21
KPNA1-206ENST00000476916 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
KPNA1-206ENST00000476916 EIF4G1Q04637 1599 aaKnown RBP16.24■□□□□ 0.19
KPNA1-206ENST00000476916 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
KPNA1-206ENST00000476916 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
KPNA1-206ENST00000476916 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
KPNA1-206ENST00000476916 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
KPNA1-206ENST00000476916 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
KPNA1-206ENST00000476916 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
KPNA1-206ENST00000476916 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
KPNA1-206ENST00000476916 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
KPNA1-206ENST00000476916 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
KPNA1-206ENST00000476916 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
KPNA1-206ENST00000476916 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
KPNA1-206ENST00000476916 RIMBP3CA6NJZ7 1639 aa15.7■□□□□ 0.1
KPNA1-206ENST00000476916 RIMBP3BA6NNM3 1639 aa15.7■□□□□ 0.1
KPNA1-206ENST00000476916 RIMBP3Q9UFD9 1639 aa15.7■□□□□ 0.1
KPNA1-206ENST00000476916 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
KPNA1-206ENST00000476916 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
KPNA1-206ENST00000476916 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
KPNA1-206ENST00000476916 FKBP8Q14318 412 aa15.58■□□□□ 0.08
KPNA1-206ENST00000476916 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
KPNA1-206ENST00000476916 NESP48681 1621 aa15.47■□□□□ 0.07
KPNA1-206ENST00000476916 ARHGEF11O15085 1522 aa15.47■□□□□ 0.07
KPNA1-206ENST00000476916 SOCS7O14512 581 aa15.43■□□□□ 0.06
KPNA1-206ENST00000476916 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
KPNA1-206ENST00000476916 LMTK3Q96Q04 1460 aa15.43■□□□□ 0.06
KPNA1-206ENST00000476916 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
KPNA1-206ENST00000476916 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
KPNA1-206ENST00000476916 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
KPNA1-206ENST00000476916 FBXO41Q8TF61 875 aa15.26■□□□□ 0.03
KPNA1-206ENST00000476916 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
KPNA1-206ENST00000476916 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
KPNA1-206ENST00000476916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.025e-6■■■□□ 18.6
KPNA1-206ENST00000476916 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
KPNA1-206ENST00000476916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
KPNA1-206ENST00000476916 HNRNPUL2Q1KMD3 747 aaKnown RBP15.19■□□□□ 0.02
KPNA1-206ENST00000476916 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
KPNA1-206ENST00000476916 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
KPNA1-206ENST00000476916 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
KPNA1-206ENST00000476916 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
KPNA1-206ENST00000476916 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
KPNA1-206ENST00000476916 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
KPNA1-206ENST00000476916 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
KPNA1-206ENST00000476916 WDR62O43379 1518 aa15.06■□□□□ 0
KPNA1-206ENST00000476916 PDS5BQ9NTI5 1447 aa15.02■□□□□ -0
KPNA1-206ENST00000476916 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
KPNA1-206ENST00000476916 DISP3Q9P2K9 1392 aa14.93□□□□□ -0.02
KPNA1-206ENST00000476916 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
KPNA1-206ENST00000476916 HECW2Q9P2P5 1572 aa14.91□□□□□ -0.02
KPNA1-206ENST00000476916 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
KPNA1-206ENST00000476916 PLCB2Q00722 1185 aa14.85□□□□□ -0.03
KPNA1-206ENST00000476916 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
KPNA1-206ENST00000476916 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
KPNA1-206ENST00000476916 APLP2Q06481 763 aa14.81□□□□□ -0.04
KPNA1-206ENST00000476916 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
KPNA1-206ENST00000476916 SPDYE4A6NLX3 237 aa14.73□□□□□ -0.05
KPNA1-206ENST00000476916 SYNJ2O15056 1496 aa14.7□□□□□ -0.06
KPNA1-206ENST00000476916 PROM2Q8N271 834 aa14.7□□□□□ -0.06
KPNA1-206ENST00000476916 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
KPNA1-206ENST00000476916 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
KPNA1-206ENST00000476916 BCANQ96GW7 911 aa14.66□□□□□ -0.06
KPNA1-206ENST00000476916 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms