RNA–Protein interactions for RNA: ENST00000476867.6

PRRX1-203, Transcript of paired related homeobox 1, humanhuman

TSL 2

Gene PRRX1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1-203ENST00000476867 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
PRRX1-203ENST00000476867 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
PRRX1-203ENST00000476867 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
PRRX1-203ENST00000476867 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
PRRX1-203ENST00000476867 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
PRRX1-203ENST00000476867 PLPPR3Q6T4P5 718 aa21.73■■□□□ 1.07
PRRX1-203ENST00000476867 FOXD1Q16676 465 aa21.26■□□□□ 0.99
PRRX1-203ENST00000476867 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
PRRX1-203ENST00000476867 ADRA2BP18089 450 aa20.54■□□□□ 0.88
PRRX1-203ENST00000476867 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
PRRX1-203ENST00000476867 ABCC9O60706 1549 aa20.03■□□□□ 0.8
PRRX1-203ENST00000476867 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
PRRX1-203ENST00000476867 MSH5O43196 834 aa19.57■□□□□ 0.72
PRRX1-203ENST00000476867 NACADO15069 1562 aa19.33■□□□□ 0.69
PRRX1-203ENST00000476867 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
PRRX1-203ENST00000476867 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
PRRX1-203ENST00000476867 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
PRRX1-203ENST00000476867 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
PRRX1-203ENST00000476867 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
PRRX1-203ENST00000476867 PPP4R3CPQ6ZMV5 832 aa19.14■□□□□ 0.65
PRRX1-203ENST00000476867 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
PRRX1-203ENST00000476867 KCNA4P22459 653 aa18.87■□□□□ 0.61
PRRX1-203ENST00000476867 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
PRRX1-203ENST00000476867 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
PRRX1-203ENST00000476867 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
PRRX1-203ENST00000476867 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
PRRX1-203ENST00000476867 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
PRRX1-203ENST00000476867 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
PRRX1-203ENST00000476867 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.57
PRRX1-203ENST00000476867 MAPK8IP2Q13387 824 aaPredicted RBP18.58■□□□□ 0.56
PRRX1-203ENST00000476867 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
PRRX1-203ENST00000476867 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
PRRX1-203ENST00000476867 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
PRRX1-203ENST00000476867 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
PRRX1-203ENST00000476867 RNF216Q9NWF9 866 aaPredicted RBP18.22■□□□□ 0.51
PRRX1-203ENST00000476867 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
PRRX1-203ENST00000476867 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
PRRX1-203ENST00000476867 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
PRRX1-203ENST00000476867 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
PRRX1-203ENST00000476867 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
PRRX1-203ENST00000476867 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
PRRX1-203ENST00000476867 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
PRRX1-203ENST00000476867 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
PRRX1-203ENST00000476867 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
PRRX1-203ENST00000476867 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
PRRX1-203ENST00000476867 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
PRRX1-203ENST00000476867 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
PRRX1-203ENST00000476867 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
PRRX1-203ENST00000476867 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
PRRX1-203ENST00000476867 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
PRRX1-203ENST00000476867 WIZO95785 1651 aa17.57■□□□□ 0.4
PRRX1-203ENST00000476867 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
PRRX1-203ENST00000476867 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
PRRX1-203ENST00000476867 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
PRRX1-203ENST00000476867 ZBTB22O15209 634 aa17.38■□□□□ 0.37
PRRX1-203ENST00000476867 SLC4A2P04920 1241 aa17.37■□□□□ 0.37
PRRX1-203ENST00000476867 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
PRRX1-203ENST00000476867 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
PRRX1-203ENST00000476867 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
PRRX1-203ENST00000476867 NESP48681 1621 aa17.33■□□□□ 0.37
PRRX1-203ENST00000476867 CADPSQ9ULU8 1353 aa17.33■□□□□ 0.36
PRRX1-203ENST00000476867 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
PRRX1-203ENST00000476867 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
PRRX1-203ENST00000476867 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
PRRX1-203ENST00000476867 CFTRP13569 1480 aa17.22■□□□□ 0.35
PRRX1-203ENST00000476867 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
PRRX1-203ENST00000476867 CUX2O14529 1486 aa17.13■□□□□ 0.33
PRRX1-203ENST00000476867 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
PRRX1-203ENST00000476867 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
PRRX1-203ENST00000476867 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
PRRX1-203ENST00000476867 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
PRRX1-203ENST00000476867 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
PRRX1-203ENST00000476867 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
PRRX1-203ENST00000476867 MYCNP04198 464 aaPredicted RBP17.03■□□□□ 0.32
PRRX1-203ENST00000476867 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
PRRX1-203ENST00000476867 WDR62O43379 1518 aa16.97■□□□□ 0.31
PRRX1-203ENST00000476867 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
PRRX1-203ENST00000476867 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
PRRX1-203ENST00000476867 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
PRRX1-203ENST00000476867 ATXN8OSP0DMR3 200 aa16.84■□□□□ 0.29
PRRX1-203ENST00000476867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
PRRX1-203ENST00000476867 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
PRRX1-203ENST00000476867 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
PRRX1-203ENST00000476867 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
PRRX1-203ENST00000476867 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
PRRX1-203ENST00000476867 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
PRRX1-203ENST00000476867 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
PRRX1-203ENST00000476867 CUX1P39880 1505 aa16.69■□□□□ 0.26
PRRX1-203ENST00000476867 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
PRRX1-203ENST00000476867 SOGA1O94964 1423 aa16.64■□□□□ 0.25
PRRX1-203ENST00000476867 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
PRRX1-203ENST00000476867 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
PRRX1-203ENST00000476867 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
PRRX1-203ENST00000476867 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
PRRX1-203ENST00000476867 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
PRRX1-203ENST00000476867 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
PRRX1-203ENST00000476867 APLP2Q06481 763 aa16.6■□□□□ 0.25
PRRX1-203ENST00000476867 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
PRRX1-203ENST00000476867 TOP2BQ02880 1626 aa16.55■□□□□ 0.24
PRRX1-203ENST00000476867 BIVM-ERCC5R4GMW8 1640 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms