RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
COL11A1-209ENST00000475980 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
COL11A1-209ENST00000475980 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
COL11A1-209ENST00000475980 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
COL11A1-209ENST00000475980 POTEDQ86YR6 584 aa22.79■■□□□ 1.24
COL11A1-209ENST00000475980 FOXD1Q16676 465 aa21.93■■□□□ 1.1
COL11A1-209ENST00000475980 MSH5O43196 834 aa21.07■□□□□ 0.96
COL11A1-209ENST00000475980 PIAS4Q8N2W9 510 aaPredicted RBP20.19■□□□□ 0.82
COL11A1-209ENST00000475980 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
COL11A1-209ENST00000475980 ADRA2BP18089 450 aa19.36■□□□□ 0.69
COL11A1-209ENST00000475980 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
COL11A1-209ENST00000475980 CACNB1Q02641 598 aaPredicted RBP18.92■□□□□ 0.62
COL11A1-209ENST00000475980 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
COL11A1-209ENST00000475980 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
COL11A1-209ENST00000475980 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
COL11A1-209ENST00000475980 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
COL11A1-209ENST00000475980 DCAF8L1A6NGE4 600 aa17.71■□□□□ 0.43
COL11A1-209ENST00000475980 POTEHQ6S545 545 aa17.62■□□□□ 0.41
COL11A1-209ENST00000475980 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
COL11A1-209ENST00000475980 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
COL11A1-209ENST00000475980 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
COL11A1-209ENST00000475980 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
COL11A1-209ENST00000475980 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
COL11A1-209ENST00000475980 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
COL11A1-209ENST00000475980 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
COL11A1-209ENST00000475980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL11A1-209ENST00000475980 ABCC9O60706 1549 aa16.29■□□□□ 0.2
COL11A1-209ENST00000475980 DSG3P32926 999 aa16.26■□□□□ 0.19
COL11A1-209ENST00000475980 CAPN15O75808 1086 aa16.08■□□□□ 0.16
COL11A1-209ENST00000475980 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
COL11A1-209ENST00000475980 SP7Q8TDD2 431 aaPredicted RBP15.89■□□□□ 0.13
COL11A1-209ENST00000475980 CCDC180Q9P1Z9 1646 aa15.82■□□□□ 0.12
COL11A1-209ENST00000475980 U3KPZ7 1027 aaPredicted RBP15.81■□□□□ 0.12
COL11A1-209ENST00000475980 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
COL11A1-209ENST00000475980 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
COL11A1-209ENST00000475980 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
COL11A1-209ENST00000475980 ABCB7O75027 752 aa15.56■□□□□ 0.08
COL11A1-209ENST00000475980 TRHP20396 242 aaPredicted RBP15.5■□□□□ 0.07
COL11A1-209ENST00000475980 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
COL11A1-209ENST00000475980 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
COL11A1-209ENST00000475980 APLP2Q06481 763 aa15.35■□□□□ 0.05
COL11A1-209ENST00000475980 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
COL11A1-209ENST00000475980 HAX1O00165 279 aa15.22■□□□□ 0.03
COL11A1-209ENST00000475980 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
COL11A1-209ENST00000475980 PLSCR2Q9NRY7 297 aa15.11■□□□□ 0.01
COL11A1-209ENST00000475980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
COL11A1-209ENST00000475980 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
COL11A1-209ENST00000475980 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
COL11A1-209ENST00000475980 NACADO15069 1562 aa15.06■□□□□ 0
COL11A1-209ENST00000475980 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
COL11A1-209ENST00000475980 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
COL11A1-209ENST00000475980 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL11A1-209ENST00000475980 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
COL11A1-209ENST00000475980 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
COL11A1-209ENST00000475980 LHX8Q68G74 356 aa14.91□□□□□ -0.02
COL11A1-209ENST00000475980 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
COL11A1-209ENST00000475980 EVX2Q03828 476 aa14.87□□□□□ -0.03
COL11A1-209ENST00000475980 POLA2Q14181 598 aa14.79□□□□□ -0.04
COL11A1-209ENST00000475980 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
COL11A1-209ENST00000475980 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
COL11A1-209ENST00000475980 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL11A1-209ENST00000475980 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
COL11A1-209ENST00000475980 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
COL11A1-209ENST00000475980 MYO15BQ96JP2 1530 aa14.7□□□□□ -0.06
COL11A1-209ENST00000475980 PITPNM1O00562 1244 aa14.62□□□□□ -0.07
COL11A1-209ENST00000475980 EIF4G1Q04637 1599 aaKnown RBP14.58□□□□□ -0.08
COL11A1-209ENST00000475980 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
COL11A1-209ENST00000475980 GABBR2O75899 941 aa14.49□□□□□ -0.09
COL11A1-209ENST00000475980 CUX2O14529 1486 aa14.45□□□□□ -0.1
COL11A1-209ENST00000475980 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
COL11A1-209ENST00000475980 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
COL11A1-209ENST00000475980 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
COL11A1-209ENST00000475980 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
COL11A1-209ENST00000475980 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
COL11A1-209ENST00000475980 KCNA4P22459 653 aa14.25□□□□□ -0.13
COL11A1-209ENST00000475980 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
COL11A1-209ENST00000475980 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
COL11A1-209ENST00000475980 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
COL11A1-209ENST00000475980 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
COL11A1-209ENST00000475980 POTEMA6NI47 508 aa14.1□□□□□ -0.15
COL11A1-209ENST00000475980 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
COL11A1-209ENST00000475980 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
COL11A1-209ENST00000475980 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
COL11A1-209ENST00000475980 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
COL11A1-209ENST00000475980 PCDH10Q9P2E7 1040 aa13.98□□□□□ -0.17
COL11A1-209ENST00000475980 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
COL11A1-209ENST00000475980 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
COL11A1-209ENST00000475980 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
COL11A1-209ENST00000475980 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
COL11A1-209ENST00000475980 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
COL11A1-209ENST00000475980 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
COL11A1-209ENST00000475980 SPDYE2Q495Y8 402 aa13.89□□□□□ -0.19
COL11A1-209ENST00000475980 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
COL11A1-209ENST00000475980 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
COL11A1-209ENST00000475980 CLCN6P51797 869 aa13.84□□□□□ -0.19
COL11A1-209ENST00000475980 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
COL11A1-209ENST00000475980 NESP48681 1621 aa13.79□□□□□ -0.2
COL11A1-209ENST00000475980 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
COL11A1-209ENST00000475980 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
COL11A1-209ENST00000475980 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms