RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
NOTCH4-204ENST00000474612 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
NOTCH4-204ENST00000474612 SUPT5HO00267 1087 aaKnown RBP29.75■■■□□ 2.35
NOTCH4-204ENST00000474612 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
NOTCH4-204ENST00000474612 EHMT2Q96KQ7 1210 aa28.63■■■□□ 2.17
NOTCH4-204ENST00000474612 FAM9AQ8IZU1 332 aaPredicted RBP28.55■■■□□ 2.16
NOTCH4-204ENST00000474612 APLP2Q06481 763 aa28.52■■■□□ 2.16
NOTCH4-204ENST00000474612 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
NOTCH4-204ENST00000474612 RANGAP1P46060 587 aaPredicted RBP27.65■■■□□ 2.02
NOTCH4-204ENST00000474612 PELP1Q8IZL8 1130 aaKnown RBP27.61■■■□□ 2.01
NOTCH4-204ENST00000474612 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
NOTCH4-204ENST00000474612 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
NOTCH4-204ENST00000474612 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.98
NOTCH4-204ENST00000474612 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
NOTCH4-204ENST00000474612 CCER1Q8TC90 406 aaPredicted RBP27.01■■□□□ 1.91
NOTCH4-204ENST00000474612 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
NOTCH4-204ENST00000474612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.81■■□□□ 1.88
NOTCH4-204ENST00000474612 HNRNPUL2Q1KMD3 747 aaKnown RBP26.81■■□□□ 1.88
NOTCH4-204ENST00000474612 MYT1LQ9UL68 1186 aa26.78■■□□□ 1.88
NOTCH4-204ENST00000474612 ABCC9O60706 1549 aa26.72■■□□□ 1.87
NOTCH4-204ENST00000474612 CENPBP07199 599 aaPredicted RBP26.63■■□□□ 1.85
NOTCH4-204ENST00000474612 PABPN1Q86U42 306 aaKnown RBP eCLIP26.55■■□□□ 1.84
NOTCH4-204ENST00000474612 PPARGC1BQ86YN6 1023 aaKnown RBP26.47■■□□□ 1.83
NOTCH4-204ENST00000474612 ITGAEP38570 1179 aa26.4■■□□□ 1.82
NOTCH4-204ENST00000474612 NEFLP07196 543 aa26.3■■□□□ 1.8
NOTCH4-204ENST00000474612 ERICH6Q7L0X2 663 aa26.28■■□□□ 1.8
NOTCH4-204ENST00000474612 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
NOTCH4-204ENST00000474612 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
NOTCH4-204ENST00000474612 POLR3GLQ9BT43 218 aa26.12■■□□□ 1.77
NOTCH4-204ENST00000474612 LOC105371045A0A1W2PR82 267 aa26.08■■□□□ 1.77
NOTCH4-204ENST00000474612 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
NOTCH4-204ENST00000474612 FBLN2P98095 1184 aa25.96■■□□□ 1.75
NOTCH4-204ENST00000474612 FAM50AQ14320 339 aaKnown RBP25.87■■□□□ 1.73
NOTCH4-204ENST00000474612 SLC4A1APQ9BWU0 796 aaKnown RBP25.84■■□□□ 1.73
NOTCH4-204ENST00000474612 TRIM52Q96A61 297 aa25.76■■□□□ 1.71
NOTCH4-204ENST00000474612 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
NOTCH4-204ENST00000474612 HRCP23327 699 aa25.6■■□□□ 1.69
NOTCH4-204ENST00000474612 DAXXQ9UER7 740 aaPredicted RBP25.53■■□□□ 1.68
NOTCH4-204ENST00000474612 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
NOTCH4-204ENST00000474612 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
NOTCH4-204ENST00000474612 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
NOTCH4-204ENST00000474612 NEUROD1Q13562 356 aa25.4■■□□□ 1.66
NOTCH4-204ENST00000474612 P3H3Q8IVL6 736 aa25.39■■□□□ 1.66
NOTCH4-204ENST00000474612 ZNF326Q5BKZ1 582 aaKnown RBP25.35■■□□□ 1.65
NOTCH4-204ENST00000474612 ARID3CA6NKF2 412 aa25.33■■□□□ 1.65
NOTCH4-204ENST00000474612 BCANQ96GW7 911 aa25.31■■□□□ 1.64
NOTCH4-204ENST00000474612 NPM1P06748 294 aaKnown RBP eCLIP25.31■■□□□ 1.64
NOTCH4-204ENST00000474612 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
NOTCH4-204ENST00000474612 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
NOTCH4-204ENST00000474612 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
NOTCH4-204ENST00000474612 CLSPNQ9HAW4 1339 aa25.16■■□□□ 1.62
NOTCH4-204ENST00000474612 DIEXFQ68CQ4 756 aaKnown RBP25.13■■□□□ 1.61
NOTCH4-204ENST00000474612 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
NOTCH4-204ENST00000474612 NEFMP07197 916 aa25.06■■□□□ 1.6
NOTCH4-204ENST00000474612 ANP32CO43423 234 aa25.05■■□□□ 1.6
NOTCH4-204ENST00000474612 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
NOTCH4-204ENST00000474612 STAG3Q9UJ98 1225 aa24.99■■□□□ 1.59
NOTCH4-204ENST00000474612 ZBTB47Q9UFB7 747 aaPredicted RBP24.98■■□□□ 1.59
NOTCH4-204ENST00000474612 CHMP7Q8WUX9 453 aaPredicted RBP24.95■■□□□ 1.58
NOTCH4-204ENST00000474612 SLC24A1O60721 1099 aa24.94■■□□□ 1.58
NOTCH4-204ENST00000474612 CHGAP10645 457 aaKnown RBP24.89■■□□□ 1.58
NOTCH4-204ENST00000474612 ZNF316A6NFI3 1004 aaPredicted RBP24.89■■□□□ 1.57
NOTCH4-204ENST00000474612 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
NOTCH4-204ENST00000474612 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
NOTCH4-204ENST00000474612 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
NOTCH4-204ENST00000474612 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
NOTCH4-204ENST00000474612 MYT1Q01538 1121 aa24.71■■□□□ 1.55
NOTCH4-204ENST00000474612 TONSLQ96HA7 1378 aa24.69■■□□□ 1.54
NOTCH4-204ENST00000474612 NACADO15069 1562 aa24.69■■□□□ 1.54
NOTCH4-204ENST00000474612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.66■■□□□ 1.54
NOTCH4-204ENST00000474612 MTUS2Q5JR59 1369 aa24.64■■□□□ 1.54
NOTCH4-204ENST00000474612 RTL5Q5HYW3 569 aaPredicted RBP24.63■■□□□ 1.53
NOTCH4-204ENST00000474612 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
NOTCH4-204ENST00000474612 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
NOTCH4-204ENST00000474612 PLEKHD1A6NEE1 506 aa24.53■■□□□ 1.52
NOTCH4-204ENST00000474612 BCL11AQ9H165 835 aa24.5■■□□□ 1.51
NOTCH4-204ENST00000474612 KCNH8Q96L42 1107 aa24.48■■□□□ 1.51
NOTCH4-204ENST00000474612 ERCC6Q03468 1493 aa24.45■■□□□ 1.5
NOTCH4-204ENST00000474612 CLIP1P30622 1438 aa24.42■■□□□ 1.5
NOTCH4-204ENST00000474612 EEA1Q15075 1411 aa24.42■■□□□ 1.5
NOTCH4-204ENST00000474612 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
NOTCH4-204ENST00000474612 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
NOTCH4-204ENST00000474612 ACIN1Q9UKV3 1341 aaKnown RBP24.35■■□□□ 1.49
NOTCH4-204ENST00000474612 PPP1R15AO75807 674 aaPredicted RBP24.34■■□□□ 1.49
NOTCH4-204ENST00000474612 KDM2AQ9Y2K7 1162 aa24.33■■□□□ 1.49
NOTCH4-204ENST00000474612 KIF27Q86VH2 1401 aa24.33■■□□□ 1.49
NOTCH4-204ENST00000474612 ARID4BQ4LE39 1312 aaPredicted RBP24.28■■□□□ 1.48
NOTCH4-204ENST00000474612 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
NOTCH4-204ENST00000474612 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
NOTCH4-204ENST00000474612 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
NOTCH4-204ENST00000474612 RRP7BPQ9NSQ0 103 aa24.23■■□□□ 1.47
NOTCH4-204ENST00000474612 CFDP1Q9UEE9 299 aaPredicted RBP24.23■■□□□ 1.47
NOTCH4-204ENST00000474612 TMC1Q8TDI8 760 aa24.21■■□□□ 1.47
NOTCH4-204ENST00000474612 C14orf37Q86TY3 774 aa24.2■■□□□ 1.47
NOTCH4-204ENST00000474612 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
NOTCH4-204ENST00000474612 DDX10Q13206 875 aaKnown RBP24.19■■□□□ 1.46
NOTCH4-204ENST00000474612 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
NOTCH4-204ENST00000474612 WDR43Q15061 677 aaKnown RBP eCLIP24.19■■□□□ 1.46
NOTCH4-204ENST00000474612 FAM9BQ8IZU0 186 aa24.15■■□□□ 1.46
NOTCH4-204ENST00000474612 HNRNPUQ00839 825 aaKnown RBP eCLIP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms