RNA–Protein interactions for RNA: ENST00000473855.1

TNC-205, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 386 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-205ENST00000473855 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
TNC-205ENST00000473855 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
TNC-205ENST00000473855 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
TNC-205ENST00000473855 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
TNC-205ENST00000473855 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
TNC-205ENST00000473855 FOXD1Q16676 465 aa15.59■□□□□ 0.09
TNC-205ENST00000473855 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
TNC-205ENST00000473855 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
TNC-205ENST00000473855 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
TNC-205ENST00000473855 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
TNC-205ENST00000473855 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
TNC-205ENST00000473855 ABCC9O60706 1549 aa14.66□□□□□ -0.06
TNC-205ENST00000473855 ADRA2BP18089 450 aa14.61□□□□□ -0.07
TNC-205ENST00000473855 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
TNC-205ENST00000473855 MSH5O43196 834 aa14.53□□□□□ -0.08
TNC-205ENST00000473855 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
TNC-205ENST00000473855 NACADO15069 1562 aa13.98□□□□□ -0.17
TNC-205ENST00000473855 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
TNC-205ENST00000473855 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.17
TNC-205ENST00000473855 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
TNC-205ENST00000473855 ZCCHC6Q5VYS8 1495 aaKnown RBP13.9□□□□□ -0.18
TNC-205ENST00000473855 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.19
TNC-205ENST00000473855 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
TNC-205ENST00000473855 SHROOM4Q9ULL8 1493 aa13.53□□□□□ -0.24
TNC-205ENST00000473855 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
TNC-205ENST00000473855 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
TNC-205ENST00000473855 MAPK8IP2Q13387 824 aaPredicted RBP13.41□□□□□ -0.26
TNC-205ENST00000473855 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
TNC-205ENST00000473855 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
TNC-205ENST00000473855 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
TNC-205ENST00000473855 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
TNC-205ENST00000473855 DMRT2Q9Y5R5 561 aa13.27□□□□□ -0.29
TNC-205ENST00000473855 CUX2O14529 1486 aa13.16□□□□□ -0.3
TNC-205ENST00000473855 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
TNC-205ENST00000473855 EIF4G1Q04637 1599 aaKnown RBP13.12□□□□□ -0.31
TNC-205ENST00000473855 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
TNC-205ENST00000473855 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
TNC-205ENST00000473855 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
TNC-205ENST00000473855 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
TNC-205ENST00000473855 SMARCA2P51531 1590 aa12.9□□□□□ -0.35
TNC-205ENST00000473855 SMARCA4P51532 1647 aa12.89□□□□□ -0.35
TNC-205ENST00000473855 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
TNC-205ENST00000473855 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
TNC-205ENST00000473855 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
TNC-205ENST00000473855 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
TNC-205ENST00000473855 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
TNC-205ENST00000473855 MROH2BQ7Z745 1585 aa12.78□□□□□ -0.36
TNC-205ENST00000473855 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
TNC-205ENST00000473855 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
TNC-205ENST00000473855 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
TNC-205ENST00000473855 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
TNC-205ENST00000473855 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.37
TNC-205ENST00000473855 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
TNC-205ENST00000473855 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
TNC-205ENST00000473855 WIZO95785 1651 aa12.6□□□□□ -0.39
TNC-205ENST00000473855 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
TNC-205ENST00000473855 LAMC3Q9Y6N6 1575 aa12.54□□□□□ -0.4
TNC-205ENST00000473855 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
TNC-205ENST00000473855 PDS5BQ9NTI5 1447 aa12.52□□□□□ -0.41
TNC-205ENST00000473855 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
TNC-205ENST00000473855 CFTRP13569 1480 aa12.45□□□□□ -0.42
TNC-205ENST00000473855 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
TNC-205ENST00000473855 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
TNC-205ENST00000473855 NESP48681 1621 aa12.43□□□□□ -0.42
TNC-205ENST00000473855 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
TNC-205ENST00000473855 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
TNC-205ENST00000473855 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
TNC-205ENST00000473855 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
TNC-205ENST00000473855 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
TNC-205ENST00000473855 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
TNC-205ENST00000473855 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
TNC-205ENST00000473855 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
TNC-205ENST00000473855 KCNA4P22459 653 aa12.32□□□□□ -0.44
TNC-205ENST00000473855 MRC2Q9UBG0 1479 aa12.32□□□□□ -0.44
TNC-205ENST00000473855 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
TNC-205ENST00000473855 CYB5RLQ6IPT4 315 aa12.26□□□□□ -0.45
TNC-205ENST00000473855 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
TNC-205ENST00000473855 C1QBPQ07021 282 aaKnown RBP12.25□□□□□ -0.45
TNC-205ENST00000473855 WDR62O43379 1518 aa12.25□□□□□ -0.45
TNC-205ENST00000473855 SOCS7O14512 581 aa12.24□□□□□ -0.45
TNC-205ENST00000473855 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
TNC-205ENST00000473855 LMTK3Q96Q04 1460 aa12.23□□□□□ -0.45
TNC-205ENST00000473855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.45
TNC-205ENST00000473855 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
TNC-205ENST00000473855 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
TNC-205ENST00000473855 ARHGEF11O15085 1522 aa12.15□□□□□ -0.46
TNC-205ENST00000473855 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
TNC-205ENST00000473855 DNMBPQ6XZF7 1577 aa12.12□□□□□ -0.47
TNC-205ENST00000473855 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
TNC-205ENST00000473855 ILDR2Q71H61 639 aa12.09□□□□□ -0.47
TNC-205ENST00000473855 FBXO41Q8TF61 875 aa12.09□□□□□ -0.47
TNC-205ENST00000473855 SOGA1O94964 1423 aa12.03□□□□□ -0.48
TNC-205ENST00000473855 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
TNC-205ENST00000473855 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.48
TNC-205ENST00000473855 CUX1P39880 1505 aa12□□□□□ -0.49
TNC-205ENST00000473855 WDR97A6NE52 1622 aa12□□□□□ -0.49
TNC-205ENST00000473855 FGD5Q6ZNL6 1462 aa11.99□□□□□ -0.49
TNC-205ENST00000473855 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
TNC-205ENST00000473855 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
TNC-205ENST00000473855 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms