RNA–Protein interactions for RNA: ENST00000472411.1

TMEM9-208, Transcript of transmembrane protein 9, humanhuman

TSL 2

Gene TMEM9, Length 2,892 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-208ENST00000472411 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
TMEM9-208ENST00000472411 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
TMEM9-208ENST00000472411 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
TMEM9-208ENST00000472411 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
TMEM9-208ENST00000472411 CCDC180Q9P1Z9 1646 aa18.08■□□□□ 0.49
TMEM9-208ENST00000472411 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
TMEM9-208ENST00000472411 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.45
TMEM9-208ENST00000472411 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
TMEM9-208ENST00000472411 HRCP23327 699 aa17.66■□□□□ 0.42
TMEM9-208ENST00000472411 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
TMEM9-208ENST00000472411 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
TMEM9-208ENST00000472411 LOC105371045A0A1W2PR82 267 aa17.38■□□□□ 0.37
TMEM9-208ENST00000472411 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
TMEM9-208ENST00000472411 ABCC9O60706 1549 aa17.16■□□□□ 0.34
TMEM9-208ENST00000472411 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
TMEM9-208ENST00000472411 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.33
TMEM9-208ENST00000472411 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
TMEM9-208ENST00000472411 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
TMEM9-208ENST00000472411 RB1CC1Q8TDY2 1594 aa16.92■□□□□ 0.3
TMEM9-208ENST00000472411 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
TMEM9-208ENST00000472411 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
TMEM9-208ENST00000472411 CECR2Q9BXF3 1484 aa16.76■□□□□ 0.27
TMEM9-208ENST00000472411 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
TMEM9-208ENST00000472411 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
TMEM9-208ENST00000472411 NACADO15069 1562 aa16.69■□□□□ 0.26
TMEM9-208ENST00000472411 WIZO95785 1651 aa16.64■□□□□ 0.25
TMEM9-208ENST00000472411 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
TMEM9-208ENST00000472411 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
TMEM9-208ENST00000472411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
TMEM9-208ENST00000472411 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
TMEM9-208ENST00000472411 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
TMEM9-208ENST00000472411 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
TMEM9-208ENST00000472411 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
TMEM9-208ENST00000472411 TOP2AP11388 1531 aaKnown RBP16.33■□□□□ 0.2
TMEM9-208ENST00000472411 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
TMEM9-208ENST00000472411 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
TMEM9-208ENST00000472411 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
TMEM9-208ENST00000472411 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
TMEM9-208ENST00000472411 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
TMEM9-208ENST00000472411 SOGA1O94964 1423 aa16.25■□□□□ 0.19
TMEM9-208ENST00000472411 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
TMEM9-208ENST00000472411 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
TMEM9-208ENST00000472411 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
TMEM9-208ENST00000472411 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
TMEM9-208ENST00000472411 ACIN1Q9UKV3 1341 aaKnown RBP16.19■□□□□ 0.18
TMEM9-208ENST00000472411 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
TMEM9-208ENST00000472411 RUSC2Q8N2Y8 1516 aa16.17■□□□□ 0.18
TMEM9-208ENST00000472411 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
TMEM9-208ENST00000472411 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
TMEM9-208ENST00000472411 EEA1Q15075 1411 aa16.14■□□□□ 0.17
TMEM9-208ENST00000472411 GOLGA3Q08378 1498 aa16.06■□□□□ 0.16
TMEM9-208ENST00000472411 CENPBP07199 599 aaPredicted RBP16.04■□□□□ 0.16
TMEM9-208ENST00000472411 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
TMEM9-208ENST00000472411 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.15
TMEM9-208ENST00000472411 ZNF316A6NFI3 1004 aaPredicted RBP16.01■□□□□ 0.15
TMEM9-208ENST00000472411 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
TMEM9-208ENST00000472411 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
TMEM9-208ENST00000472411 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
TMEM9-208ENST00000472411 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
TMEM9-208ENST00000472411 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
TMEM9-208ENST00000472411 KIF21BO75037 1637 aa15.91■□□□□ 0.14
TMEM9-208ENST00000472411 CLIP1P30622 1438 aa15.91■□□□□ 0.14
TMEM9-208ENST00000472411 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
TMEM9-208ENST00000472411 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.12
TMEM9-208ENST00000472411 RAPGEF2Q9Y4G8 1499 aa15.83■□□□□ 0.12
TMEM9-208ENST00000472411 MIER1Q8N108 512 aa15.83■□□□□ 0.12
TMEM9-208ENST00000472411 APLP2Q06481 763 aa15.82■□□□□ 0.12
TMEM9-208ENST00000472411 YTHDC1Q96MU7 727 aaKnown RBP15.82■□□□□ 0.12
TMEM9-208ENST00000472411 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
TMEM9-208ENST00000472411 RANGAP1P46060 587 aaPredicted RBP15.81■□□□□ 0.12
TMEM9-208ENST00000472411 TOP2BQ02880 1626 aa15.71■□□□□ 0.11
TMEM9-208ENST00000472411 BIVM-ERCC5R4GMW8 1640 aa15.64■□□□□ 0.09
TMEM9-208ENST00000472411 PRXQ9BXM0 1461 aa15.63■□□□□ 0.09
TMEM9-208ENST00000472411 KANK4Q5T7N3 995 aaPredicted RBP15.63■□□□□ 0.09
TMEM9-208ENST00000472411 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
TMEM9-208ENST00000472411 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
TMEM9-208ENST00000472411 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
TMEM9-208ENST00000472411 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
TMEM9-208ENST00000472411 CUX1P39880 1505 aa15.52■□□□□ 0.08
TMEM9-208ENST00000472411 RRBP1Q9P2E9 1410 aaKnown RBP15.52■□□□□ 0.07
TMEM9-208ENST00000472411 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
TMEM9-208ENST00000472411 MYT1Q01538 1121 aa15.48■□□□□ 0.07
TMEM9-208ENST00000472411 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
TMEM9-208ENST00000472411 ARHGAP35Q9NRY4 1499 aa15.46■□□□□ 0.06
TMEM9-208ENST00000472411 CCNB3Q8WWL7 1395 aa15.45■□□□□ 0.06
TMEM9-208ENST00000472411 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
TMEM9-208ENST00000472411 CUX2O14529 1486 aa15.45■□□□□ 0.06
TMEM9-208ENST00000472411 ITGAEP38570 1179 aa15.44■□□□□ 0.06
TMEM9-208ENST00000472411 CFTRP13569 1480 aa15.41■□□□□ 0.06
TMEM9-208ENST00000472411 SUPT16HQ9Y5B9 1047 aaKnown RBP15.38■□□□□ 0.05
TMEM9-208ENST00000472411 IGF1RP08069 1367 aa15.36■□□□□ 0.05
TMEM9-208ENST00000472411 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
TMEM9-208ENST00000472411 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
TMEM9-208ENST00000472411 TIAM1Q13009 1591 aa15.3■□□□□ 0.04
TMEM9-208ENST00000472411 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
TMEM9-208ENST00000472411 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
TMEM9-208ENST00000472411 CARMIL1Q5VZK9 1371 aa15.29■□□□□ 0.04
TMEM9-208ENST00000472411 SETD5Q9C0A6 1442 aa15.28■□□□□ 0.04
TMEM9-208ENST00000472411 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
TMEM9-208ENST00000472411 LRRC9Q6ZRR7 1453 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms