RNA–Protein interactions for RNA: ENST00000470712.1

LINC00877-205, long intergenic non-protein coding RNA 877, humanhuman

TSL 4

Gene LINC00877, Length 789 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-205ENST00000470712 AEBP2Q6ZN18 517 aaPredicted RBP26.12■■□□□ 1.77
LINC00877-205ENST00000470712 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
LINC00877-205ENST00000470712 PHF23Q9BUL5 403 aaPredicted RBP22.64■■□□□ 1.21
LINC00877-205ENST00000470712 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
LINC00877-205ENST00000470712 PLPPR3Q6T4P5 718 aa20.87■□□□□ 0.93
LINC00877-205ENST00000470712 NISCHQ9Y2I1 1504 aa20.51■□□□□ 0.87
LINC00877-205ENST00000470712 FOXD1Q16676 465 aa20.49■□□□□ 0.87
LINC00877-205ENST00000470712 PPP6R1Q9UPN7 881 aa19.92■□□□□ 0.78
LINC00877-205ENST00000470712 ADRA2BP18089 450 aa19.89■□□□□ 0.77
LINC00877-205ENST00000470712 PIAS4Q8N2W9 510 aaPredicted RBP19.31■□□□□ 0.68
LINC00877-205ENST00000470712 MSH5O43196 834 aa18.72■□□□□ 0.59
LINC00877-205ENST00000470712 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
LINC00877-205ENST00000470712 KCNA4P22459 653 aa18.31■□□□□ 0.52
LINC00877-205ENST00000470712 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
LINC00877-205ENST00000470712 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
LINC00877-205ENST00000470712 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
LINC00877-205ENST00000470712 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
LINC00877-205ENST00000470712 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
LINC00877-205ENST00000470712 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
LINC00877-205ENST00000470712 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
LINC00877-205ENST00000470712 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
LINC00877-205ENST00000470712 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
LINC00877-205ENST00000470712 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
LINC00877-205ENST00000470712 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
LINC00877-205ENST00000470712 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
LINC00877-205ENST00000470712 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
LINC00877-205ENST00000470712 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
LINC00877-205ENST00000470712 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
LINC00877-205ENST00000470712 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
LINC00877-205ENST00000470712 ZBTB22O15209 634 aa16.9■□□□□ 0.3
LINC00877-205ENST00000470712 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
LINC00877-205ENST00000470712 SHROOM4Q9ULL8 1493 aa16.81■□□□□ 0.28
LINC00877-205ENST00000470712 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
LINC00877-205ENST00000470712 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
LINC00877-205ENST00000470712 ABCC9O60706 1549 aa16.75■□□□□ 0.27
LINC00877-205ENST00000470712 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
LINC00877-205ENST00000470712 FOXD4L1Q9NU39 408 aa16.73■□□□□ 0.27
LINC00877-205ENST00000470712 NACADO15069 1562 aa16.67■□□□□ 0.26
LINC00877-205ENST00000470712 RB1CC1Q8TDY2 1594 aa16.52■□□□□ 0.24
LINC00877-205ENST00000470712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC00877-205ENST00000470712 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
LINC00877-205ENST00000470712 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
LINC00877-205ENST00000470712 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
LINC00877-205ENST00000470712 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
LINC00877-205ENST00000470712 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
LINC00877-205ENST00000470712 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
LINC00877-205ENST00000470712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
LINC00877-205ENST00000470712 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
LINC00877-205ENST00000470712 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
LINC00877-205ENST00000470712 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
LINC00877-205ENST00000470712 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
LINC00877-205ENST00000470712 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
LINC00877-205ENST00000470712 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
LINC00877-205ENST00000470712 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
LINC00877-205ENST00000470712 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
LINC00877-205ENST00000470712 APLP2Q06481 763 aa15.83■□□□□ 0.12
LINC00877-205ENST00000470712 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
LINC00877-205ENST00000470712 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
LINC00877-205ENST00000470712 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
LINC00877-205ENST00000470712 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
LINC00877-205ENST00000470712 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
LINC00877-205ENST00000470712 WIZO95785 1651 aa15.7■□□□□ 0.1
LINC00877-205ENST00000470712 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
LINC00877-205ENST00000470712 CAPN15O75808 1086 aa15.68■□□□□ 0.1
LINC00877-205ENST00000470712 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
LINC00877-205ENST00000470712 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
LINC00877-205ENST00000470712 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
LINC00877-205ENST00000470712 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
LINC00877-205ENST00000470712 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
LINC00877-205ENST00000470712 POLA2Q14181 598 aa15.49■□□□□ 0.07
LINC00877-205ENST00000470712 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
LINC00877-205ENST00000470712 ABCB7O75027 752 aa15.44■□□□□ 0.06
LINC00877-205ENST00000470712 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
LINC00877-205ENST00000470712 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
LINC00877-205ENST00000470712 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
LINC00877-205ENST00000470712 DSG3P32926 999 aa15.41■□□□□ 0.06
LINC00877-205ENST00000470712 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
LINC00877-205ENST00000470712 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
LINC00877-205ENST00000470712 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
LINC00877-205ENST00000470712 NCAPD3P42695 1498 aa15.32■□□□□ 0.04
LINC00877-205ENST00000470712 FKBP8Q14318 412 aa15.25■□□□□ 0.03
LINC00877-205ENST00000470712 FBLN2P98095 1184 aa15.21■□□□□ 0.03
LINC00877-205ENST00000470712 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
LINC00877-205ENST00000470712 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
LINC00877-205ENST00000470712 ABCC8Q09428 1581 aa15.08■□□□□ 0
LINC00877-205ENST00000470712 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
LINC00877-205ENST00000470712 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
LINC00877-205ENST00000470712 EEA1Q15075 1411 aa15.03■□□□□ -0
LINC00877-205ENST00000470712 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
LINC00877-205ENST00000470712 PRDM2Q13029 1718 aa15.03■□□□□ -0
LINC00877-205ENST00000470712 LOC105371045A0A1W2PR82 267 aa15.01□□□□□ -0.01
LINC00877-205ENST00000470712 CFTRP13569 1480 aa15□□□□□ -0.01
LINC00877-205ENST00000470712 CADPSQ9ULU8 1353 aa14.97□□□□□ -0.01
LINC00877-205ENST00000470712 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
LINC00877-205ENST00000470712 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
LINC00877-205ENST00000470712 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
LINC00877-205ENST00000470712 BIVM-ERCC5R4GMW8 1640 aa14.89□□□□□ -0.03
LINC00877-205ENST00000470712 PROM2Q8N271 834 aa14.85□□□□□ -0.03
LINC00877-205ENST00000470712 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
LINC00877-205ENST00000470712 SOGA1O94964 1423 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms