RNA–Protein interactions for RNA: ENST00000468793.5

DFFB-207, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-207ENST00000468793 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
DFFB-207ENST00000468793 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
DFFB-207ENST00000468793 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
DFFB-207ENST00000468793 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.2
DFFB-207ENST00000468793 HRCP23327 699 aa22.29■■□□□ 1.16
DFFB-207ENST00000468793 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
DFFB-207ENST00000468793 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
DFFB-207ENST00000468793 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
DFFB-207ENST00000468793 PPARGC1BQ86YN6 1023 aaKnown RBP22.07■■□□□ 1.12
DFFB-207ENST00000468793 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
DFFB-207ENST00000468793 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
DFFB-207ENST00000468793 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
DFFB-207ENST00000468793 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
DFFB-207ENST00000468793 TRIM26Q12899 539 aaPredicted RBP21.29■■□□□ 1
DFFB-207ENST00000468793 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
DFFB-207ENST00000468793 ABCC9O60706 1549 aa21.13■□□□□ 0.97
DFFB-207ENST00000468793 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
DFFB-207ENST00000468793 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
DFFB-207ENST00000468793 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
DFFB-207ENST00000468793 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
DFFB-207ENST00000468793 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
DFFB-207ENST00000468793 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
DFFB-207ENST00000468793 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
DFFB-207ENST00000468793 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
DFFB-207ENST00000468793 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
DFFB-207ENST00000468793 MROH2BQ7Z745 1585 aa20.64■□□□□ 0.9
DFFB-207ENST00000468793 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
DFFB-207ENST00000468793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
DFFB-207ENST00000468793 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
DFFB-207ENST00000468793 NACADO15069 1562 aa20.55■□□□□ 0.88
DFFB-207ENST00000468793 WIZO95785 1651 aa20.51■□□□□ 0.87
DFFB-207ENST00000468793 CCER1Q8TC90 406 aaPredicted RBP20.51■□□□□ 0.87
DFFB-207ENST00000468793 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
DFFB-207ENST00000468793 TTBK1Q5TCY1 1321 aaPredicted RBP20.43■□□□□ 0.86
DFFB-207ENST00000468793 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
DFFB-207ENST00000468793 DIEXFQ68CQ4 756 aaKnown RBP20.38■□□□□ 0.85
DFFB-207ENST00000468793 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
DFFB-207ENST00000468793 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
DFFB-207ENST00000468793 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
DFFB-207ENST00000468793 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
DFFB-207ENST00000468793 MYT1Q01538 1121 aa20.14■□□□□ 0.81
DFFB-207ENST00000468793 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
DFFB-207ENST00000468793 SMARCA4P51532 1647 aa20.04■□□□□ 0.8
DFFB-207ENST00000468793 SOGA1O94964 1423 aa20.02■□□□□ 0.8
DFFB-207ENST00000468793 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
DFFB-207ENST00000468793 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
DFFB-207ENST00000468793 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
DFFB-207ENST00000468793 ZNF316A6NFI3 1004 aaPredicted RBP19.98■□□□□ 0.79
DFFB-207ENST00000468793 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
DFFB-207ENST00000468793 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
DFFB-207ENST00000468793 UBTFP17480 764 aaKnown RBP19.95■□□□□ 0.78
DFFB-207ENST00000468793 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
DFFB-207ENST00000468793 MIER1Q8N108 512 aa19.9■□□□□ 0.78
DFFB-207ENST00000468793 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
DFFB-207ENST00000468793 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
DFFB-207ENST00000468793 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
DFFB-207ENST00000468793 CEP162Q5TB80 1403 aa19.8■□□□□ 0.76
DFFB-207ENST00000468793 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
DFFB-207ENST00000468793 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
DFFB-207ENST00000468793 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
DFFB-207ENST00000468793 SYNJ1O43426 1573 aa19.59■□□□□ 0.73
DFFB-207ENST00000468793 BAZ1BQ9UIG0 1483 aaKnown RBP19.59■□□□□ 0.73
DFFB-207ENST00000468793 GOLGA3Q08378 1498 aa19.53■□□□□ 0.72
DFFB-207ENST00000468793 EEA1Q15075 1411 aa19.48■□□□□ 0.71
DFFB-207ENST00000468793 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
DFFB-207ENST00000468793 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
DFFB-207ENST00000468793 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
DFFB-207ENST00000468793 CLIP1P30622 1438 aa19.44■□□□□ 0.7
DFFB-207ENST00000468793 APLP2Q06481 763 aa19.44■□□□□ 0.7
DFFB-207ENST00000468793 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.7
DFFB-207ENST00000468793 TSHZ2Q9NRE2 1034 aa19.33■□□□□ 0.69
DFFB-207ENST00000468793 BCANQ96GW7 911 aa19.32■□□□□ 0.68
DFFB-207ENST00000468793 ANP32EQ9BTT0 268 aa19.25■□□□□ 0.67
DFFB-207ENST00000468793 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
DFFB-207ENST00000468793 KANK4Q5T7N3 995 aaPredicted RBP19.25■□□□□ 0.67
DFFB-207ENST00000468793 KIF21BO75037 1637 aa19.24■□□□□ 0.67
DFFB-207ENST00000468793 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
DFFB-207ENST00000468793 ITGAEP38570 1179 aa19.2■□□□□ 0.66
DFFB-207ENST00000468793 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
DFFB-207ENST00000468793 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
DFFB-207ENST00000468793 CUX1P39880 1505 aa19.17■□□□□ 0.66
DFFB-207ENST00000468793 DHX57Q6P158 1386 aaKnown RBP19.15■□□□□ 0.66
DFFB-207ENST00000468793 NCAPD3P42695 1498 aa19.13■□□□□ 0.65
DFFB-207ENST00000468793 BCL11AQ9H165 835 aa19.12■□□□□ 0.65
DFFB-207ENST00000468793 FKBP8Q14318 412 aa19.11■□□□□ 0.65
DFFB-207ENST00000468793 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
DFFB-207ENST00000468793 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
DFFB-207ENST00000468793 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
DFFB-207ENST00000468793 ATP1B4Q9UN42 357 aaPredicted RBP19.05■□□□□ 0.64
DFFB-207ENST00000468793 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
DFFB-207ENST00000468793 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
DFFB-207ENST00000468793 CFTRP13569 1480 aa19.02■□□□□ 0.64
DFFB-207ENST00000468793 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
DFFB-207ENST00000468793 CUX2O14529 1486 aa18.99■□□□□ 0.63
DFFB-207ENST00000468793 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
DFFB-207ENST00000468793 IGF1RP08069 1367 aa18.94■□□□□ 0.62
DFFB-207ENST00000468793 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
DFFB-207ENST00000468793 ARHGAP35Q9NRY4 1499 aa18.93■□□□□ 0.62
DFFB-207ENST00000468793 NEFLP07196 543 aa18.92■□□□□ 0.62
DFFB-207ENST00000468793 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms