RNA–Protein interactions for RNA: ENST00000465404.2

AMD1-206, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 5

Gene AMD1, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-206ENST00000465404 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
AMD1-206ENST00000465404 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
AMD1-206ENST00000465404 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
AMD1-206ENST00000465404 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
AMD1-206ENST00000465404 FOXD1Q16676 465 aa18.9■□□□□ 0.62
AMD1-206ENST00000465404 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
AMD1-206ENST00000465404 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
AMD1-206ENST00000465404 ADRA2BP18089 450 aa17.85■□□□□ 0.45
AMD1-206ENST00000465404 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
AMD1-206ENST00000465404 MSH5O43196 834 aa17.44■□□□□ 0.38
AMD1-206ENST00000465404 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
AMD1-206ENST00000465404 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
AMD1-206ENST00000465404 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
AMD1-206ENST00000465404 PPP4R3CPQ6ZMV5 832 aa16.14■□□□□ 0.17
AMD1-206ENST00000465404 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
AMD1-206ENST00000465404 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
AMD1-206ENST00000465404 ABCC9O60706 1549 aa15.85■□□□□ 0.13
AMD1-206ENST00000465404 CNKSR2Q8WXI2 1034 aa15.72■□□□□ 0.11
AMD1-206ENST00000465404 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
AMD1-206ENST00000465404 RNF216Q9NWF9 866 aaPredicted RBP15.52■□□□□ 0.08
AMD1-206ENST00000465404 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
AMD1-206ENST00000465404 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
AMD1-206ENST00000465404 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
AMD1-206ENST00000465404 KCNA4P22459 653 aa15.37■□□□□ 0.05
AMD1-206ENST00000465404 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
AMD1-206ENST00000465404 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
AMD1-206ENST00000465404 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
AMD1-206ENST00000465404 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
AMD1-206ENST00000465404 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
AMD1-206ENST00000465404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
AMD1-206ENST00000465404 C1QBPQ07021 282 aaKnown RBP14.71□□□□□ -0.05
AMD1-206ENST00000465404 DNAJC5Q9H3Z4 198 aa14.7□□□□□ -0.06
AMD1-206ENST00000465404 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
AMD1-206ENST00000465404 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
AMD1-206ENST00000465404 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
AMD1-206ENST00000465404 NACADO15069 1562 aa14.53□□□□□ -0.08
AMD1-206ENST00000465404 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
AMD1-206ENST00000465404 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.09
AMD1-206ENST00000465404 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
AMD1-206ENST00000465404 CECR2Q9BXF3 1484 aa14.36□□□□□ -0.11
AMD1-206ENST00000465404 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
AMD1-206ENST00000465404 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
AMD1-206ENST00000465404 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
AMD1-206ENST00000465404 CAPN15O75808 1086 aa14.23□□□□□ -0.13
AMD1-206ENST00000465404 ZBTB22O15209 634 aa14.2□□□□□ -0.14
AMD1-206ENST00000465404 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
AMD1-206ENST00000465404 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
AMD1-206ENST00000465404 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
AMD1-206ENST00000465404 DSG3P32926 999 aa14.14□□□□□ -0.15
AMD1-206ENST00000465404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
AMD1-206ENST00000465404 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
AMD1-206ENST00000465404 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
AMD1-206ENST00000465404 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
AMD1-206ENST00000465404 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
AMD1-206ENST00000465404 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
AMD1-206ENST00000465404 APLP2Q06481 763 aa14.02□□□□□ -0.17
AMD1-206ENST00000465404 ABCB7O75027 752 aa14□□□□□ -0.17
AMD1-206ENST00000465404 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
AMD1-206ENST00000465404 CUX2O14529 1486 aa13.99□□□□□ -0.17
AMD1-206ENST00000465404 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
AMD1-206ENST00000465404 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
AMD1-206ENST00000465404 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
AMD1-206ENST00000465404 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
AMD1-206ENST00000465404 POLA2Q14181 598 aa13.77□□□□□ -0.21
AMD1-206ENST00000465404 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
AMD1-206ENST00000465404 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
AMD1-206ENST00000465404 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
AMD1-206ENST00000465404 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
AMD1-206ENST00000465404 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
AMD1-206ENST00000465404 THOC2Q8NI27 1593 aaKnown RBP13.43□□□□□ -0.26
AMD1-206ENST00000465404 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
AMD1-206ENST00000465404 NESP48681 1621 aa13.38□□□□□ -0.27
AMD1-206ENST00000465404 NCAPD3P42695 1498 aa13.37□□□□□ -0.27
AMD1-206ENST00000465404 OSCARQ8IYS5 282 aa13.36□□□□□ -0.27
AMD1-206ENST00000465404 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
AMD1-206ENST00000465404 SMARCA2P51531 1590 aa13.34□□□□□ -0.27
AMD1-206ENST00000465404 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
AMD1-206ENST00000465404 BAZ1AQ9NRL2 1556 aaPredicted RBP13.27□□□□□ -0.29
AMD1-206ENST00000465404 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
AMD1-206ENST00000465404 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
AMD1-206ENST00000465404 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
AMD1-206ENST00000465404 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
AMD1-206ENST00000465404 FBLN2P98095 1184 aa13.2□□□□□ -0.3
AMD1-206ENST00000465404 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
AMD1-206ENST00000465404 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
AMD1-206ENST00000465404 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
AMD1-206ENST00000465404 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
AMD1-206ENST00000465404 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
AMD1-206ENST00000465404 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
AMD1-206ENST00000465404 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
AMD1-206ENST00000465404 POTEHQ6S545 545 aa13.11□□□□□ -0.31
AMD1-206ENST00000465404 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
AMD1-206ENST00000465404 SMARCA4P51532 1647 aa13.09□□□□□ -0.31
AMD1-206ENST00000465404 WDR62O43379 1518 aa13.08□□□□□ -0.31
AMD1-206ENST00000465404 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
AMD1-206ENST00000465404 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
AMD1-206ENST00000465404 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
AMD1-206ENST00000465404 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
AMD1-206ENST00000465404 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
AMD1-206ENST00000465404 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms