RNA–Protein interactions for RNA: ENST00000463620.1

BRD8-216, Transcript of bromodomain containing 8, humanhuman

TSL 2

Gene BRD8, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-216ENST00000463620 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
BRD8-216ENST00000463620 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
BRD8-216ENST00000463620 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
BRD8-216ENST00000463620 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
BRD8-216ENST00000463620 FOXD1Q16676 465 aa16.65■□□□□ 0.26
BRD8-216ENST00000463620 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
BRD8-216ENST00000463620 NISCHQ9Y2I1 1504 aa16.04■□□□□ 0.16
BRD8-216ENST00000463620 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
BRD8-216ENST00000463620 ADRA2BP18089 450 aa15.8■□□□□ 0.12
BRD8-216ENST00000463620 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
BRD8-216ENST00000463620 MSH5O43196 834 aa15.38■□□□□ 0.05
BRD8-216ENST00000463620 ABCC9O60706 1549 aa14.65□□□□□ -0.06
BRD8-216ENST00000463620 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
BRD8-216ENST00000463620 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
BRD8-216ENST00000463620 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
BRD8-216ENST00000463620 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
BRD8-216ENST00000463620 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
BRD8-216ENST00000463620 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
BRD8-216ENST00000463620 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
BRD8-216ENST00000463620 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
BRD8-216ENST00000463620 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
BRD8-216ENST00000463620 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
BRD8-216ENST00000463620 NACADO15069 1562 aa13.77□□□□□ -0.21
BRD8-216ENST00000463620 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
BRD8-216ENST00000463620 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
BRD8-216ENST00000463620 KCNA4P22459 653 aa13.72□□□□□ -0.21
BRD8-216ENST00000463620 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
BRD8-216ENST00000463620 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
BRD8-216ENST00000463620 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
BRD8-216ENST00000463620 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
BRD8-216ENST00000463620 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
BRD8-216ENST00000463620 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
BRD8-216ENST00000463620 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
BRD8-216ENST00000463620 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
BRD8-216ENST00000463620 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
BRD8-216ENST00000463620 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.29
BRD8-216ENST00000463620 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
BRD8-216ENST00000463620 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
BRD8-216ENST00000463620 EIF4G1Q04637 1599 aaKnown RBP13.2□□□□□ -0.3
BRD8-216ENST00000463620 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
BRD8-216ENST00000463620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.31e-9■■■■□ 22.1
BRD8-216ENST00000463620 SCRIBQ14160 1630 aa13.1□□□□□ -0.31
BRD8-216ENST00000463620 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
BRD8-216ENST00000463620 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
BRD8-216ENST00000463620 SLC4A2P04920 1241 aa13□□□□□ -0.33
BRD8-216ENST00000463620 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
BRD8-216ENST00000463620 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
BRD8-216ENST00000463620 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
BRD8-216ENST00000463620 CUX2O14529 1486 aa12.81□□□□□ -0.36
BRD8-216ENST00000463620 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
BRD8-216ENST00000463620 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
BRD8-216ENST00000463620 ZBTB22O15209 634 aa12.65□□□□□ -0.38
BRD8-216ENST00000463620 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
BRD8-216ENST00000463620 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
BRD8-216ENST00000463620 CAPN15O75808 1086 aa12.64□□□□□ -0.39
BRD8-216ENST00000463620 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
BRD8-216ENST00000463620 ERCC6Q03468 1493 aa12.62□□□□□ -0.39
BRD8-216ENST00000463620 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
BRD8-216ENST00000463620 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
BRD8-216ENST00000463620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
BRD8-216ENST00000463620 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
BRD8-216ENST00000463620 NESP48681 1621 aa12.54□□□□□ -0.4
BRD8-216ENST00000463620 SMARCA4P51532 1647 aa12.54□□□□□ -0.4
BRD8-216ENST00000463620 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
BRD8-216ENST00000463620 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
BRD8-216ENST00000463620 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.41
BRD8-216ENST00000463620 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
BRD8-216ENST00000463620 APLP2Q06481 763 aa12.48□□□□□ -0.41
BRD8-216ENST00000463620 DSG3P32926 999 aa12.46□□□□□ -0.41
BRD8-216ENST00000463620 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
BRD8-216ENST00000463620 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
BRD8-216ENST00000463620 BAZ1AQ9NRL2 1556 aaPredicted RBP12.44□□□□□ -0.42
BRD8-216ENST00000463620 ABCB7O75027 752 aa12.44□□□□□ -0.42
BRD8-216ENST00000463620 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
BRD8-216ENST00000463620 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
BRD8-216ENST00000463620 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
BRD8-216ENST00000463620 PDS5BQ9NTI5 1447 aa12.36□□□□□ -0.43
BRD8-216ENST00000463620 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
BRD8-216ENST00000463620 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
BRD8-216ENST00000463620 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
BRD8-216ENST00000463620 WDR62O43379 1518 aa12.3□□□□□ -0.44
BRD8-216ENST00000463620 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
BRD8-216ENST00000463620 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
BRD8-216ENST00000463620 POLA2Q14181 598 aa12.23□□□□□ -0.45
BRD8-216ENST00000463620 TRIM41Q8WV44 630 aa12.22□□□□□ -0.45
BRD8-216ENST00000463620 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
BRD8-216ENST00000463620 CFTRP13569 1480 aa12.14□□□□□ -0.47
BRD8-216ENST00000463620 ATXN8OSP0DMR3 200 aa12.14□□□□□ -0.47
BRD8-216ENST00000463620 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
BRD8-216ENST00000463620 WIZO95785 1651 aa12.13□□□□□ -0.47
BRD8-216ENST00000463620 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
BRD8-216ENST00000463620 URB2Q14146 1524 aaKnown RBP12.08□□□□□ -0.48
BRD8-216ENST00000463620 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
BRD8-216ENST00000463620 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
BRD8-216ENST00000463620 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
BRD8-216ENST00000463620 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
BRD8-216ENST00000463620 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
BRD8-216ENST00000463620 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
BRD8-216ENST00000463620 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
BRD8-216ENST00000463620 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms