RNA–Protein interactions for RNA: ENST00000460204.1

ITGB8-202, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 1,090 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-202ENST00000460204 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.37
ITGB8-202ENST00000460204 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
ITGB8-202ENST00000460204 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
ITGB8-202ENST00000460204 POTEDQ86YR6 584 aa20.12■□□□□ 0.81
ITGB8-202ENST00000460204 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
ITGB8-202ENST00000460204 FOXD1Q16676 465 aa19.17■□□□□ 0.66
ITGB8-202ENST00000460204 MSH5O43196 834 aa18.5■□□□□ 0.55
ITGB8-202ENST00000460204 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
ITGB8-202ENST00000460204 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
ITGB8-202ENST00000460204 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
ITGB8-202ENST00000460204 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
ITGB8-202ENST00000460204 ADRA2BP18089 450 aa17■□□□□ 0.31
ITGB8-202ENST00000460204 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
ITGB8-202ENST00000460204 ABCC9O60706 1549 aa16.04■□□□□ 0.16
ITGB8-202ENST00000460204 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
ITGB8-202ENST00000460204 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
ITGB8-202ENST00000460204 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
ITGB8-202ENST00000460204 RNF39Q9H2S5 420 aa15.63■□□□□ 0.09
ITGB8-202ENST00000460204 POTEHQ6S545 545 aa15.55■□□□□ 0.08
ITGB8-202ENST00000460204 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
ITGB8-202ENST00000460204 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
ITGB8-202ENST00000460204 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
ITGB8-202ENST00000460204 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
ITGB8-202ENST00000460204 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
ITGB8-202ENST00000460204 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
ITGB8-202ENST00000460204 CNKSR2Q8WXI2 1034 aa15.01□□□□□ -0.01
ITGB8-202ENST00000460204 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
ITGB8-202ENST00000460204 NACADO15069 1562 aa14.86□□□□□ -0.03
ITGB8-202ENST00000460204 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
ITGB8-202ENST00000460204 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
ITGB8-202ENST00000460204 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
ITGB8-202ENST00000460204 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
ITGB8-202ENST00000460204 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
ITGB8-202ENST00000460204 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
ITGB8-202ENST00000460204 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
ITGB8-202ENST00000460204 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.08
ITGB8-202ENST00000460204 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.08
ITGB8-202ENST00000460204 MYO15BQ96JP2 1530 aa14.47□□□□□ -0.09
ITGB8-202ENST00000460204 SHROOM4Q9ULL8 1493 aa14.47□□□□□ -0.09
ITGB8-202ENST00000460204 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
ITGB8-202ENST00000460204 KCNA4P22459 653 aa14.41□□□□□ -0.1
ITGB8-202ENST00000460204 EIF4G1Q04637 1599 aaKnown RBP14.36□□□□□ -0.11
ITGB8-202ENST00000460204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
ITGB8-202ENST00000460204 DSG3P32926 999 aa14.2□□□□□ -0.14
ITGB8-202ENST00000460204 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
ITGB8-202ENST00000460204 CUX2O14529 1486 aa14.12□□□□□ -0.15
ITGB8-202ENST00000460204 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
ITGB8-202ENST00000460204 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
ITGB8-202ENST00000460204 CAPN15O75808 1086 aa14.01□□□□□ -0.17
ITGB8-202ENST00000460204 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
ITGB8-202ENST00000460204 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
ITGB8-202ENST00000460204 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
ITGB8-202ENST00000460204 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
ITGB8-202ENST00000460204 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
ITGB8-202ENST00000460204 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
ITGB8-202ENST00000460204 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
ITGB8-202ENST00000460204 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
ITGB8-202ENST00000460204 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
ITGB8-202ENST00000460204 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
ITGB8-202ENST00000460204 NESP48681 1621 aa13.62□□□□□ -0.23
ITGB8-202ENST00000460204 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
ITGB8-202ENST00000460204 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
ITGB8-202ENST00000460204 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
ITGB8-202ENST00000460204 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
ITGB8-202ENST00000460204 KIF21AQ7Z4S6 1674 aa13.54□□□□□ -0.24
ITGB8-202ENST00000460204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
ITGB8-202ENST00000460204 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
ITGB8-202ENST00000460204 ABCB7O75027 752 aa13.53□□□□□ -0.24
ITGB8-202ENST00000460204 LAMC3Q9Y6N6 1575 aa13.52□□□□□ -0.25
ITGB8-202ENST00000460204 APLP2Q06481 763 aa13.51□□□□□ -0.25
ITGB8-202ENST00000460204 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
ITGB8-202ENST00000460204 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
ITGB8-202ENST00000460204 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
ITGB8-202ENST00000460204 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
ITGB8-202ENST00000460204 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
ITGB8-202ENST00000460204 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
ITGB8-202ENST00000460204 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
ITGB8-202ENST00000460204 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
ITGB8-202ENST00000460204 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
ITGB8-202ENST00000460204 WDR62O43379 1518 aa13.36□□□□□ -0.27
ITGB8-202ENST00000460204 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
ITGB8-202ENST00000460204 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
ITGB8-202ENST00000460204 PLSCR2Q9NRY7 297 aa13.34□□□□□ -0.27
ITGB8-202ENST00000460204 HAX1O00165 279 aa13.32□□□□□ -0.28
ITGB8-202ENST00000460204 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
ITGB8-202ENST00000460204 ZBTB22O15209 634 aa13.29□□□□□ -0.28
ITGB8-202ENST00000460204 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
ITGB8-202ENST00000460204 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
ITGB8-202ENST00000460204 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
ITGB8-202ENST00000460204 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
ITGB8-202ENST00000460204 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
ITGB8-202ENST00000460204 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
ITGB8-202ENST00000460204 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
ITGB8-202ENST00000460204 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
ITGB8-202ENST00000460204 ARHGEF11O15085 1522 aa13.15□□□□□ -0.3
ITGB8-202ENST00000460204 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
ITGB8-202ENST00000460204 POLA2Q14181 598 aa13.13□□□□□ -0.31
ITGB8-202ENST00000460204 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
ITGB8-202ENST00000460204 LHX8Q68G74 356 aa13.1□□□□□ -0.31
ITGB8-202ENST00000460204 FANCD2Q9BXW9 1451 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms