RNA–Protein interactions for RNA: ENST00000458716.2

ZFHX4-201, Transcript of zinc finger homeobox 4, humanhuman

TSL 2

Gene ZFHX4, Length 3,612 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4-201ENST00000458716 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
ZFHX4-201ENST00000458716 SHROOM4Q9ULL8 1493 aa15.03■□□□□ -0
ZFHX4-201ENST00000458716 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
ZFHX4-201ENST00000458716 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
ZFHX4-201ENST00000458716 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
ZFHX4-201ENST00000458716 HRCP23327 699 aa14.45□□□□□ -0.1
ZFHX4-201ENST00000458716 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
ZFHX4-201ENST00000458716 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
ZFHX4-201ENST00000458716 PCGF6Q9BYE7 350 aa14.42□□□□□ -0.1
ZFHX4-201ENST00000458716 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
ZFHX4-201ENST00000458716 PPARGC1BQ86YN6 1023 aaKnown RBP14.32□□□□□ -0.12
ZFHX4-201ENST00000458716 DCAF1Q9Y4B6 1507 aa14.28□□□□□ -0.12
ZFHX4-201ENST00000458716 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
ZFHX4-201ENST00000458716 ABCC9O60706 1549 aa13.93□□□□□ -0.18
ZFHX4-201ENST00000458716 TRIM26Q12899 539 aaPredicted RBP13.9□□□□□ -0.18
ZFHX4-201ENST00000458716 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
ZFHX4-201ENST00000458716 FAM9AQ8IZU1 332 aaPredicted RBP13.81□□□□□ -0.2
ZFHX4-201ENST00000458716 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
ZFHX4-201ENST00000458716 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
ZFHX4-201ENST00000458716 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
ZFHX4-201ENST00000458716 ZEB1P37275 1124 aaPredicted RBP13.64□□□□□ -0.23
ZFHX4-201ENST00000458716 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
ZFHX4-201ENST00000458716 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
ZFHX4-201ENST00000458716 NACADO15069 1562 aa13.56□□□□□ -0.24
ZFHX4-201ENST00000458716 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
ZFHX4-201ENST00000458716 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
ZFHX4-201ENST00000458716 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
ZFHX4-201ENST00000458716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
ZFHX4-201ENST00000458716 WIZO95785 1651 aa13.45□□□□□ -0.26
ZFHX4-201ENST00000458716 PELP1Q8IZL8 1130 aaKnown RBP13.45□□□□□ -0.26
ZFHX4-201ENST00000458716 TTBK1Q5TCY1 1321 aaPredicted RBP13.44□□□□□ -0.26
ZFHX4-201ENST00000458716 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
ZFHX4-201ENST00000458716 CCER1Q8TC90 406 aaPredicted RBP13.4□□□□□ -0.26
ZFHX4-201ENST00000458716 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
ZFHX4-201ENST00000458716 NEUROD1Q13562 356 aa13.33□□□□□ -0.28
ZFHX4-201ENST00000458716 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
ZFHX4-201ENST00000458716 DIEXFQ68CQ4 756 aaKnown RBP13.25□□□□□ -0.29
ZFHX4-201ENST00000458716 GTF3C3Q9Y5Q9 886 aa13.24□□□□□ -0.29
ZFHX4-201ENST00000458716 SMARCA4P51532 1647 aa13.23□□□□□ -0.29
ZFHX4-201ENST00000458716 TOP2AP11388 1531 aaKnown RBP13.19□□□□□ -0.3
ZFHX4-201ENST00000458716 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
ZFHX4-201ENST00000458716 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
ZFHX4-201ENST00000458716 YTHDC1Q96MU7 727 aaKnown RBP13.14□□□□□ -0.31
ZFHX4-201ENST00000458716 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
ZFHX4-201ENST00000458716 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
ZFHX4-201ENST00000458716 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
ZFHX4-201ENST00000458716 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.31
ZFHX4-201ENST00000458716 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
ZFHX4-201ENST00000458716 CEP162Q5TB80 1403 aa13.04□□□□□ -0.32
ZFHX4-201ENST00000458716 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.32
ZFHX4-201ENST00000458716 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
ZFHX4-201ENST00000458716 SOGA1O94964 1423 aa13.01□□□□□ -0.33
ZFHX4-201ENST00000458716 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
ZFHX4-201ENST00000458716 MIER1Q8N108 512 aa12.96□□□□□ -0.33
ZFHX4-201ENST00000458716 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.34
ZFHX4-201ENST00000458716 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
ZFHX4-201ENST00000458716 WRNQ14191 1432 aaPredicted RBP eCLIP12.95□□□□□ -0.34
ZFHX4-201ENST00000458716 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
ZFHX4-201ENST00000458716 SYNJ1O43426 1573 aa12.88□□□□□ -0.35
ZFHX4-201ENST00000458716 APLP2Q06481 763 aa12.81□□□□□ -0.36
ZFHX4-201ENST00000458716 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
ZFHX4-201ENST00000458716 MYT1Q01538 1121 aa12.79□□□□□ -0.36
ZFHX4-201ENST00000458716 KIF21BO75037 1637 aa12.79□□□□□ -0.36
ZFHX4-201ENST00000458716 ATAD2BQ9ULI0 1458 aa12.79□□□□□ -0.36
ZFHX4-201ENST00000458716 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
ZFHX4-201ENST00000458716 EEA1Q15075 1411 aa12.78□□□□□ -0.36
ZFHX4-201ENST00000458716 CLIP1P30622 1438 aa12.75□□□□□ -0.37
ZFHX4-201ENST00000458716 BIVM-ERCC5R4GMW8 1640 aa12.72□□□□□ -0.37
ZFHX4-201ENST00000458716 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
ZFHX4-201ENST00000458716 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
ZFHX4-201ENST00000458716 CEP164Q9UPV0 1460 aa12.68□□□□□ -0.38
ZFHX4-201ENST00000458716 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
ZFHX4-201ENST00000458716 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
ZFHX4-201ENST00000458716 ITGAEP38570 1179 aa12.63□□□□□ -0.39
ZFHX4-201ENST00000458716 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
ZFHX4-201ENST00000458716 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
ZFHX4-201ENST00000458716 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
ZFHX4-201ENST00000458716 KANK4Q5T7N3 995 aaPredicted RBP12.59□□□□□ -0.39
ZFHX4-201ENST00000458716 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
ZFHX4-201ENST00000458716 CUX1P39880 1505 aa12.55□□□□□ -0.4
ZFHX4-201ENST00000458716 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
ZFHX4-201ENST00000458716 ERICH3Q5RHP9 1530 aa12.54□□□□□ -0.4
ZFHX4-201ENST00000458716 BCANQ96GW7 911 aa12.54□□□□□ -0.4
ZFHX4-201ENST00000458716 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
ZFHX4-201ENST00000458716 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
ZFHX4-201ENST00000458716 ARAP1Q96P48 1450 aa12.49□□□□□ -0.41
ZFHX4-201ENST00000458716 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
ZFHX4-201ENST00000458716 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
ZFHX4-201ENST00000458716 CFTRP13569 1480 aa12.46□□□□□ -0.41
ZFHX4-201ENST00000458716 DDX10Q13206 875 aaKnown RBP12.43□□□□□ -0.42
ZFHX4-201ENST00000458716 HIRIP3Q9BW71 556 aaPredicted RBP12.42□□□□□ -0.42
ZFHX4-201ENST00000458716 FKBP8Q14318 412 aa12.41□□□□□ -0.42
ZFHX4-201ENST00000458716 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
ZFHX4-201ENST00000458716 SIN3AQ96ST3 1273 aa12.39□□□□□ -0.43
ZFHX4-201ENST00000458716 ATP1B4Q9UN42 357 aaPredicted RBP12.37□□□□□ -0.43
ZFHX4-201ENST00000458716 RAB3GAP2Q9H2M9 1393 aa12.36□□□□□ -0.43
ZFHX4-201ENST00000458716 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
ZFHX4-201ENST00000458716 ANP32EQ9BTT0 268 aa12.36□□□□□ -0.43
ZFHX4-201ENST00000458716 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
ZFHX4-201ENST00000458716 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms