RNA–Protein interactions for RNA: ENST00000452499.1

KRTCAP3-203, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 373 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-203ENST00000452499 AEBP2Q6ZN18 517 aaPredicted RBP27.16■■□□□ 1.94
KRTCAP3-203ENST00000452499 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
KRTCAP3-203ENST00000452499 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
KRTCAP3-203ENST00000452499 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
KRTCAP3-203ENST00000452499 FOXD1Q16676 465 aa21.53■■□□□ 1.04
KRTCAP3-203ENST00000452499 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
KRTCAP3-203ENST00000452499 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
KRTCAP3-203ENST00000452499 ADRA2BP18089 450 aa20.22■□□□□ 0.83
KRTCAP3-203ENST00000452499 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
KRTCAP3-203ENST00000452499 MSH5O43196 834 aa20.02■□□□□ 0.8
KRTCAP3-203ENST00000452499 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
KRTCAP3-203ENST00000452499 NISCHQ9Y2I1 1504 aa19.3■□□□□ 0.68
KRTCAP3-203ENST00000452499 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
KRTCAP3-203ENST00000452499 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
KRTCAP3-203ENST00000452499 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
KRTCAP3-203ENST00000452499 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
KRTCAP3-203ENST00000452499 ABCC9O60706 1549 aa18.17■□□□□ 0.5
KRTCAP3-203ENST00000452499 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
KRTCAP3-203ENST00000452499 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
KRTCAP3-203ENST00000452499 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
KRTCAP3-203ENST00000452499 DCAF8L1A6NGE4 600 aa17.57■□□□□ 0.4
KRTCAP3-203ENST00000452499 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
KRTCAP3-203ENST00000452499 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
KRTCAP3-203ENST00000452499 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
KRTCAP3-203ENST00000452499 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
KRTCAP3-203ENST00000452499 KCNA4P22459 653 aa17.14■□□□□ 0.33
KRTCAP3-203ENST00000452499 RNF39Q9H2S5 420 aa17.14■□□□□ 0.33
KRTCAP3-203ENST00000452499 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
KRTCAP3-203ENST00000452499 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
KRTCAP3-203ENST00000452499 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
KRTCAP3-203ENST00000452499 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
KRTCAP3-203ENST00000452499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
KRTCAP3-203ENST00000452499 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
KRTCAP3-203ENST00000452499 NACADO15069 1562 aa16.74■□□□□ 0.27
KRTCAP3-203ENST00000452499 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
KRTCAP3-203ENST00000452499 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
KRTCAP3-203ENST00000452499 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
KRTCAP3-203ENST00000452499 UNC13AQ9UPW8 1703 aa16.46■□□□□ 0.23
KRTCAP3-203ENST00000452499 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
KRTCAP3-203ENST00000452499 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
KRTCAP3-203ENST00000452499 CC2D2AQ9P2K1 1620 aa16.32■□□□□ 0.2
KRTCAP3-203ENST00000452499 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
KRTCAP3-203ENST00000452499 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
KRTCAP3-203ENST00000452499 CAPN15O75808 1086 aa16.22■□□□□ 0.19
KRTCAP3-203ENST00000452499 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
KRTCAP3-203ENST00000452499 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
KRTCAP3-203ENST00000452499 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
KRTCAP3-203ENST00000452499 DSG3P32926 999 aa16.12■□□□□ 0.17
KRTCAP3-203ENST00000452499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
KRTCAP3-203ENST00000452499 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
KRTCAP3-203ENST00000452499 TRHP20396 242 aaPredicted RBP16.02■□□□□ 0.16
KRTCAP3-203ENST00000452499 APLP2Q06481 763 aa16.02■□□□□ 0.16
KRTCAP3-203ENST00000452499 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
KRTCAP3-203ENST00000452499 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
KRTCAP3-203ENST00000452499 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
KRTCAP3-203ENST00000452499 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
KRTCAP3-203ENST00000452499 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
KRTCAP3-203ENST00000452499 ABCB7O75027 752 aa15.88■□□□□ 0.13
KRTCAP3-203ENST00000452499 CUX2O14529 1486 aa15.88■□□□□ 0.13
KRTCAP3-203ENST00000452499 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
KRTCAP3-203ENST00000452499 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
KRTCAP3-203ENST00000452499 ZBTB22O15209 634 aa15.78■□□□□ 0.12
KRTCAP3-203ENST00000452499 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
KRTCAP3-203ENST00000452499 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
KRTCAP3-203ENST00000452499 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
KRTCAP3-203ENST00000452499 POLA2Q14181 598 aa15.63■□□□□ 0.09
KRTCAP3-203ENST00000452499 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
KRTCAP3-203ENST00000452499 NESP48681 1621 aa15.41■□□□□ 0.06
KRTCAP3-203ENST00000452499 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
KRTCAP3-203ENST00000452499 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
KRTCAP3-203ENST00000452499 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
KRTCAP3-203ENST00000452499 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
KRTCAP3-203ENST00000452499 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
KRTCAP3-203ENST00000452499 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
KRTCAP3-203ENST00000452499 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
KRTCAP3-203ENST00000452499 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
KRTCAP3-203ENST00000452499 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
KRTCAP3-203ENST00000452499 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
KRTCAP3-203ENST00000452499 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
KRTCAP3-203ENST00000452499 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
KRTCAP3-203ENST00000452499 POTEHQ6S545 545 aa15.18■□□□□ 0.02
KRTCAP3-203ENST00000452499 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
KRTCAP3-203ENST00000452499 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
KRTCAP3-203ENST00000452499 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
KRTCAP3-203ENST00000452499 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
KRTCAP3-203ENST00000452499 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
KRTCAP3-203ENST00000452499 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
KRTCAP3-203ENST00000452499 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
KRTCAP3-203ENST00000452499 WDR62O43379 1518 aa14.99□□□□□ -0.01
KRTCAP3-203ENST00000452499 PEG3Q9GZU2 1588 aa14.97□□□□□ -0.01
KRTCAP3-203ENST00000452499 FBLN2P98095 1184 aa14.95□□□□□ -0.02
KRTCAP3-203ENST00000452499 CHRDL2Q6WN34 429 aa14.95□□□□□ -0.02
KRTCAP3-203ENST00000452499 MKRN4PQ13434 485 aaPredicted RBP14.94□□□□□ -0.02
KRTCAP3-203ENST00000452499 REM2Q8IYK8 340 aaPredicted RBP14.91□□□□□ -0.02
KRTCAP3-203ENST00000452499 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
KRTCAP3-203ENST00000452499 RIMBP3CA6NJZ7 1639 aa14.88□□□□□ -0.03
KRTCAP3-203ENST00000452499 RIMBP3BA6NNM3 1639 aa14.88□□□□□ -0.03
KRTCAP3-203ENST00000452499 RIMBP3Q9UFD9 1639 aa14.88□□□□□ -0.03
KRTCAP3-203ENST00000452499 CYB5RLQ6IPT4 315 aa14.87□□□□□ -0.03
KRTCAP3-203ENST00000452499 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms