RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
SNHG17-207ENST00000449469 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
SNHG17-207ENST00000449469 ZCCHC6Q5VYS8 1495 aaKnown RBP29.59■■■□□ 2.33
SNHG17-207ENST00000449469 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
SNHG17-207ENST00000449469 DCAF1Q9Y4B6 1507 aa28.88■■■□□ 2.21
SNHG17-207ENST00000449469 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
SNHG17-207ENST00000449469 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
SNHG17-207ENST00000449469 CHIC1Q5VXU3 224 aa28.31■■■□□ 2.12
SNHG17-207ENST00000449469 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
SNHG17-207ENST00000449469 ABCC9O60706 1549 aa27.96■■■□□ 2.07
SNHG17-207ENST00000449469 HRCP23327 699 aa27.7■■■□□ 2.02
SNHG17-207ENST00000449469 SCRIBQ14160 1630 aa27.6■■■□□ 2.01
SNHG17-207ENST00000449469 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
SNHG17-207ENST00000449469 NACADO15069 1562 aa27.49■■□□□ 1.99
SNHG17-207ENST00000449469 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
SNHG17-207ENST00000449469 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
SNHG17-207ENST00000449469 LOC105371045A0A1W2PR82 267 aa27.23■■□□□ 1.95
SNHG17-207ENST00000449469 TRIM26Q12899 539 aaPredicted RBP27.11■■□□□ 1.93
SNHG17-207ENST00000449469 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
SNHG17-207ENST00000449469 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
SNHG17-207ENST00000449469 CECR2Q9BXF3 1484 aa26.97■■□□□ 1.91
SNHG17-207ENST00000449469 BAZ1AQ9NRL2 1556 aaPredicted RBP26.9■■□□□ 1.9
SNHG17-207ENST00000449469 WIZO95785 1651 aa26.83■■□□□ 1.89
SNHG17-207ENST00000449469 ZEB1P37275 1124 aaPredicted RBP26.77■■□□□ 1.88
SNHG17-207ENST00000449469 PPARGC1BQ86YN6 1023 aaKnown RBP26.73■■□□□ 1.87
SNHG17-207ENST00000449469 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
SNHG17-207ENST00000449469 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
SNHG17-207ENST00000449469 FAM9AQ8IZU1 332 aaPredicted RBP26.56■■□□□ 1.84
SNHG17-207ENST00000449469 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
SNHG17-207ENST00000449469 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
SNHG17-207ENST00000449469 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
SNHG17-207ENST00000449469 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
SNHG17-207ENST00000449469 EEA1Q15075 1411 aa26.27■■□□□ 1.8
SNHG17-207ENST00000449469 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
SNHG17-207ENST00000449469 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
SNHG17-207ENST00000449469 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
SNHG17-207ENST00000449469 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
SNHG17-207ENST00000449469 TNIKQ9UKE5 1360 aa26.09■■□□□ 1.77
SNHG17-207ENST00000449469 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
SNHG17-207ENST00000449469 CEP162Q5TB80 1403 aa26.04■■□□□ 1.76
SNHG17-207ENST00000449469 SOGA1O94964 1423 aa25.97■■□□□ 1.75
SNHG17-207ENST00000449469 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
SNHG17-207ENST00000449469 CSRNP3Q8WYN3 585 aa25.93■■□□□ 1.74
SNHG17-207ENST00000449469 KIF21BO75037 1637 aa25.83■■□□□ 1.73
SNHG17-207ENST00000449469 CCER1Q8TC90 406 aaPredicted RBP25.82■■□□□ 1.72
SNHG17-207ENST00000449469 CEP164Q9UPV0 1460 aa25.81■■□□□ 1.72
SNHG17-207ENST00000449469 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
SNHG17-207ENST00000449469 RUSC2Q8N2Y8 1516 aa25.77■■□□□ 1.72
SNHG17-207ENST00000449469 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
SNHG17-207ENST00000449469 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNHG17-207ENST00000449469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.73■■□□□ 1.71
SNHG17-207ENST00000449469 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
SNHG17-207ENST00000449469 UBTFP17480 764 aaKnown RBP25.72■■□□□ 1.71
SNHG17-207ENST00000449469 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
SNHG17-207ENST00000449469 CLIP1P30622 1438 aa25.55■■□□□ 1.68
SNHG17-207ENST00000449469 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
SNHG17-207ENST00000449469 BIVM-ERCC5R4GMW8 1640 aa25.5■■□□□ 1.67
SNHG17-207ENST00000449469 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
SNHG17-207ENST00000449469 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
SNHG17-207ENST00000449469 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
SNHG17-207ENST00000449469 SCAF1Q9H7N4 1312 aaKnown RBP25.42■■□□□ 1.66
SNHG17-207ENST00000449469 DIEXFQ68CQ4 756 aaKnown RBP25.4■■□□□ 1.66
SNHG17-207ENST00000449469 RAPGEF2Q9Y4G8 1499 aa25.4■■□□□ 1.66
SNHG17-207ENST00000449469 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
SNHG17-207ENST00000449469 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
SNHG17-207ENST00000449469 APLP2Q06481 763 aa25.31■■□□□ 1.64
SNHG17-207ENST00000449469 ACIN1Q9UKV3 1341 aaKnown RBP25.31■■□□□ 1.64
SNHG17-207ENST00000449469 PRXQ9BXM0 1461 aa25.3■■□□□ 1.64
SNHG17-207ENST00000449469 CENPBP07199 599 aaPredicted RBP25.28■■□□□ 1.64
SNHG17-207ENST00000449469 ZNF316A6NFI3 1004 aaPredicted RBP25.26■■□□□ 1.63
SNHG17-207ENST00000449469 CUX1P39880 1505 aa25.16■■□□□ 1.62
SNHG17-207ENST00000449469 KIF27Q86VH2 1401 aa25.16■■□□□ 1.62
SNHG17-207ENST00000449469 CFTRP13569 1480 aa25.16■■□□□ 1.62
SNHG17-207ENST00000449469 CLSPNQ9HAW4 1339 aa25.15■■□□□ 1.62
SNHG17-207ENST00000449469 ARAP1Q96P48 1450 aa25.12■■□□□ 1.61
SNHG17-207ENST00000449469 PRDM2Q13029 1718 aa25.11■■□□□ 1.61
SNHG17-207ENST00000449469 NEUROD1Q13562 356 aa25.11■■□□□ 1.61
SNHG17-207ENST00000449469 HNRNPUL2Q1KMD3 747 aaKnown RBP25.11■■□□□ 1.61
SNHG17-207ENST00000449469 RRBP1Q9P2E9 1410 aaKnown RBP24.98■■□□□ 1.59
SNHG17-207ENST00000449469 CUX2O14529 1486 aa24.93■■□□□ 1.58
SNHG17-207ENST00000449469 GTF3C3Q9Y5Q9 886 aa24.89■■□□□ 1.57
SNHG17-207ENST00000449469 MAP3K1Q13233 1512 aa24.89■■□□□ 1.57
SNHG17-207ENST00000449469 ARHGAP35Q9NRY4 1499 aa24.88■■□□□ 1.57
SNHG17-207ENST00000449469 DHX57Q6P158 1386 aaKnown RBP24.88■■□□□ 1.57
SNHG17-207ENST00000449469 RANGAP1P46060 587 aaPredicted RBP24.86■■□□□ 1.57
SNHG17-207ENST00000449469 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
SNHG17-207ENST00000449469 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
SNHG17-207ENST00000449469 KANK4Q5T7N3 995 aaPredicted RBP24.79■■□□□ 1.56
SNHG17-207ENST00000449469 IGF1RP08069 1367 aa24.76■■□□□ 1.55
SNHG17-207ENST00000449469 MIER1Q8N108 512 aa24.74■■□□□ 1.55
SNHG17-207ENST00000449469 TIAM1Q13009 1591 aa24.72■■□□□ 1.55
SNHG17-207ENST00000449469 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
SNHG17-207ENST00000449469 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
SNHG17-207ENST00000449469 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
SNHG17-207ENST00000449469 CFAP43Q8NDM7 1665 aa24.6■■□□□ 1.53
SNHG17-207ENST00000449469 LRRC9Q6ZRR7 1453 aa24.59■■□□□ 1.53
SNHG17-207ENST00000449469 YTHDC1Q96MU7 727 aaKnown RBP24.56■■□□□ 1.52
SNHG17-207ENST00000449469 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
SNHG17-207ENST00000449469 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
SNHG17-207ENST00000449469 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms