RNA–Protein interactions for RNA: ENST00000441371.1

SEC16B-203, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 811 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-203ENST00000441371 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
SEC16B-203ENST00000441371 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
SEC16B-203ENST00000441371 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
SEC16B-203ENST00000441371 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
SEC16B-203ENST00000441371 FOXD1Q16676 465 aa21.74■■□□□ 1.07
SEC16B-203ENST00000441371 POTEDQ86YR6 584 aa21.17■□□□□ 0.98
SEC16B-203ENST00000441371 MSH5O43196 834 aa20.5■□□□□ 0.87
SEC16B-203ENST00000441371 PIAS4Q8N2W9 510 aaPredicted RBP20.18■□□□□ 0.82
SEC16B-203ENST00000441371 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
SEC16B-203ENST00000441371 ADRA2BP18089 450 aa19.8■□□□□ 0.76
SEC16B-203ENST00000441371 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
SEC16B-203ENST00000441371 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
SEC16B-203ENST00000441371 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
SEC16B-203ENST00000441371 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
SEC16B-203ENST00000441371 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
SEC16B-203ENST00000441371 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
SEC16B-203ENST00000441371 ABCC9O60706 1549 aa17.76■□□□□ 0.43
SEC16B-203ENST00000441371 DCAF8L1A6NGE4 600 aa17.71■□□□□ 0.43
SEC16B-203ENST00000441371 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
SEC16B-203ENST00000441371 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
SEC16B-203ENST00000441371 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
SEC16B-203ENST00000441371 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
SEC16B-203ENST00000441371 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
SEC16B-203ENST00000441371 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
SEC16B-203ENST00000441371 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
SEC16B-203ENST00000441371 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
SEC16B-203ENST00000441371 PABPN1Q86U42 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEC16B-203ENST00000441371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEC16B-203ENST00000441371 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
SEC16B-203ENST00000441371 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
SEC16B-203ENST00000441371 POTEHQ6S545 545 aa16.45■□□□□ 0.22
SEC16B-203ENST00000441371 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
SEC16B-203ENST00000441371 DNAJC5Q9H3Z4 198 aa16.3■□□□□ 0.2
SEC16B-203ENST00000441371 NACADO15069 1562 aa16.19■□□□□ 0.18
SEC16B-203ENST00000441371 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
SEC16B-203ENST00000441371 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
SEC16B-203ENST00000441371 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
SEC16B-203ENST00000441371 CAPN15O75808 1086 aa16.17■□□□□ 0.18
SEC16B-203ENST00000441371 DSG3P32926 999 aa16.16■□□□□ 0.18
SEC16B-203ENST00000441371 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
SEC16B-203ENST00000441371 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
SEC16B-203ENST00000441371 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
SEC16B-203ENST00000441371 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
SEC16B-203ENST00000441371 ABCB7O75027 752 aa15.8■□□□□ 0.12
SEC16B-203ENST00000441371 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
SEC16B-203ENST00000441371 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
SEC16B-203ENST00000441371 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
SEC16B-203ENST00000441371 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
SEC16B-203ENST00000441371 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
SEC16B-203ENST00000441371 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
SEC16B-203ENST00000441371 APLP2Q06481 763 aa15.53■□□□□ 0.08
SEC16B-203ENST00000441371 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
SEC16B-203ENST00000441371 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
SEC16B-203ENST00000441371 CUX2O14529 1486 aa15.43■□□□□ 0.06
SEC16B-203ENST00000441371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
SEC16B-203ENST00000441371 KCNA4P22459 653 aa15.38■□□□□ 0.05
SEC16B-203ENST00000441371 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
SEC16B-203ENST00000441371 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
SEC16B-203ENST00000441371 CHRDL2Q6WN34 429 aa15.37■□□□□ 0.05
SEC16B-203ENST00000441371 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
SEC16B-203ENST00000441371 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
SEC16B-203ENST00000441371 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
SEC16B-203ENST00000441371 DCAF1Q9Y4B6 1507 aa15.3■□□□□ 0.04
SEC16B-203ENST00000441371 POLA2Q14181 598 aa15.16■□□□□ 0.02
SEC16B-203ENST00000441371 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
SEC16B-203ENST00000441371 NESP48681 1621 aa15.06■□□□□ 0
SEC16B-203ENST00000441371 NCAPD3P42695 1498 aa15.05■□□□□ -0
SEC16B-203ENST00000441371 MYCNP04198 464 aaPredicted RBP14.95□□□□□ -0.02
SEC16B-203ENST00000441371 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
SEC16B-203ENST00000441371 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
SEC16B-203ENST00000441371 PIP4P2Q8N4L2 257 aa14.88□□□□□ -0.03
SEC16B-203ENST00000441371 OSCARQ8IYS5 282 aa14.85□□□□□ -0.03
SEC16B-203ENST00000441371 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
SEC16B-203ENST00000441371 THOC2Q8NI27 1593 aaKnown RBP14.83□□□□□ -0.04
SEC16B-203ENST00000441371 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
SEC16B-203ENST00000441371 HAX1O00165 279 aa14.8□□□□□ -0.04
SEC16B-203ENST00000441371 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
SEC16B-203ENST00000441371 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
SEC16B-203ENST00000441371 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
SEC16B-203ENST00000441371 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
SEC16B-203ENST00000441371 PITPNM1O00562 1244 aa14.7□□□□□ -0.06
SEC16B-203ENST00000441371 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
SEC16B-203ENST00000441371 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
SEC16B-203ENST00000441371 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
SEC16B-203ENST00000441371 CADPSQ9ULU8 1353 aa14.64□□□□□ -0.07
SEC16B-203ENST00000441371 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
SEC16B-203ENST00000441371 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
SEC16B-203ENST00000441371 KIF21AQ7Z4S6 1674 aa14.62□□□□□ -0.07
SEC16B-203ENST00000441371 EVX2Q03828 476 aa14.6□□□□□ -0.07
SEC16B-203ENST00000441371 CYB5RLQ6IPT4 315 aa14.6□□□□□ -0.07
SEC16B-203ENST00000441371 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
SEC16B-203ENST00000441371 WDR62O43379 1518 aa14.54□□□□□ -0.08
SEC16B-203ENST00000441371 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
SEC16B-203ENST00000441371 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
SEC16B-203ENST00000441371 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
SEC16B-203ENST00000441371 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
SEC16B-203ENST00000441371 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
SEC16B-203ENST00000441371 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
SEC16B-203ENST00000441371 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
SEC16B-203ENST00000441371 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms