RNA–Protein interactions for RNA: ENST00000437534.3

CKMT1B-205, Transcript of creatine kinase, mitochondrial 1B, humanhuman

TSL 2

Gene CKMT1B, Length 2,396 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKMT1B-205ENST00000437534 NISCHQ9Y2I1 1504 aa30.89■■■□□ 2.54
CKMT1B-205ENST00000437534 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
CKMT1B-205ENST00000437534 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.79
CKMT1B-205ENST00000437534 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
CKMT1B-205ENST00000437534 CCDC180Q9P1Z9 1646 aa26.13■■□□□ 1.77
CKMT1B-205ENST00000437534 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
CKMT1B-205ENST00000437534 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
CKMT1B-205ENST00000437534 HRCP23327 699 aa25.58■■□□□ 1.69
CKMT1B-205ENST00000437534 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
CKMT1B-205ENST00000437534 DCAF8L2P0C7V8 631 aa25.33■■□□□ 1.65
CKMT1B-205ENST00000437534 PCGF6Q9BYE7 350 aa25.22■■□□□ 1.63
CKMT1B-205ENST00000437534 LOC105371045A0A1W2PR82 267 aa24.86■■□□□ 1.57
CKMT1B-205ENST00000437534 PPARGC1BQ86YN6 1023 aaKnown RBP24.82■■□□□ 1.56
CKMT1B-205ENST00000437534 ABCC9O60706 1549 aa24.79■■□□□ 1.56
CKMT1B-205ENST00000437534 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
CKMT1B-205ENST00000437534 RSF1Q96T23 1441 aaPredicted RBP24.57■■□□□ 1.52
CKMT1B-205ENST00000437534 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
CKMT1B-205ENST00000437534 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
CKMT1B-205ENST00000437534 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
CKMT1B-205ENST00000437534 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
CKMT1B-205ENST00000437534 FAM9AQ8IZU1 332 aaPredicted RBP24.09■■□□□ 1.45
CKMT1B-205ENST00000437534 NACADO15069 1562 aa24.07■■□□□ 1.44
CKMT1B-205ENST00000437534 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
CKMT1B-205ENST00000437534 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
CKMT1B-205ENST00000437534 PELP1Q8IZL8 1130 aaKnown RBP23.91■■□□□ 1.42
CKMT1B-205ENST00000437534 WIZO95785 1651 aa23.86■■□□□ 1.41
CKMT1B-205ENST00000437534 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
CKMT1B-205ENST00000437534 EHMT2Q96KQ7 1210 aa23.78■■□□□ 1.4
CKMT1B-205ENST00000437534 EIF4G1Q04637 1599 aaKnown RBP23.76■■□□□ 1.39
CKMT1B-205ENST00000437534 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
CKMT1B-205ENST00000437534 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
CKMT1B-205ENST00000437534 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
CKMT1B-205ENST00000437534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.57■■□□□ 1.36
CKMT1B-205ENST00000437534 TOP2AP11388 1531 aaKnown RBP23.55■■□□□ 1.36
CKMT1B-205ENST00000437534 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.35
CKMT1B-205ENST00000437534 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.34
CKMT1B-205ENST00000437534 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
CKMT1B-205ENST00000437534 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
CKMT1B-205ENST00000437534 TNIKQ9UKE5 1360 aa23.43■■□□□ 1.34
CKMT1B-205ENST00000437534 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
CKMT1B-205ENST00000437534 EEA1Q15075 1411 aa23.41■■□□□ 1.34
CKMT1B-205ENST00000437534 SMARCA2P51531 1590 aa23.41■■□□□ 1.34
CKMT1B-205ENST00000437534 DIEXFQ68CQ4 756 aaKnown RBP23.37■■□□□ 1.33
CKMT1B-205ENST00000437534 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
CKMT1B-205ENST00000437534 SOGA1O94964 1423 aa23.31■■□□□ 1.32
CKMT1B-205ENST00000437534 CENPBP07199 599 aaPredicted RBP23.31■■□□□ 1.32
CKMT1B-205ENST00000437534 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
CKMT1B-205ENST00000437534 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
CKMT1B-205ENST00000437534 UNC13AQ9UPW8 1703 aa23.18■■□□□ 1.3
CKMT1B-205ENST00000437534 UBTFP17480 764 aaKnown RBP23.16■■□□□ 1.3
CKMT1B-205ENST00000437534 RUSC2Q8N2Y8 1516 aa23.15■■□□□ 1.3
CKMT1B-205ENST00000437534 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.3
CKMT1B-205ENST00000437534 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.29
CKMT1B-205ENST00000437534 ZNF316A6NFI3 1004 aaPredicted RBP23.13■■□□□ 1.29
CKMT1B-205ENST00000437534 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
CKMT1B-205ENST00000437534 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
CKMT1B-205ENST00000437534 KIF21BO75037 1637 aa23.02■■□□□ 1.28
CKMT1B-205ENST00000437534 CLIP1P30622 1438 aa22.92■■□□□ 1.26
CKMT1B-205ENST00000437534 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
CKMT1B-205ENST00000437534 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
CKMT1B-205ENST00000437534 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
CKMT1B-205ENST00000437534 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
CKMT1B-205ENST00000437534 MYT1Q01538 1121 aa22.87■■□□□ 1.25
CKMT1B-205ENST00000437534 HNRNPUL2Q1KMD3 747 aaKnown RBP22.83■■□□□ 1.25
CKMT1B-205ENST00000437534 APLP2Q06481 763 aa22.79■■□□□ 1.24
CKMT1B-205ENST00000437534 MIER1Q8N108 512 aa22.78■■□□□ 1.24
CKMT1B-205ENST00000437534 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
CKMT1B-205ENST00000437534 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
CKMT1B-205ENST00000437534 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
CKMT1B-205ENST00000437534 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
CKMT1B-205ENST00000437534 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
CKMT1B-205ENST00000437534 TOP2BQ02880 1626 aa22.66■■□□□ 1.22
CKMT1B-205ENST00000437534 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
CKMT1B-205ENST00000437534 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
CKMT1B-205ENST00000437534 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
CKMT1B-205ENST00000437534 DHX57Q6P158 1386 aaKnown RBP22.54■■□□□ 1.2
CKMT1B-205ENST00000437534 ARAP1Q96P48 1450 aa22.49■■□□□ 1.19
CKMT1B-205ENST00000437534 RANGAP1P46060 587 aaPredicted RBP22.46■■□□□ 1.19
CKMT1B-205ENST00000437534 RRBP1Q9P2E9 1410 aaKnown RBP22.45■■□□□ 1.18
CKMT1B-205ENST00000437534 CUX2O14529 1486 aa22.41■■□□□ 1.18
CKMT1B-205ENST00000437534 KANK4Q5T7N3 995 aaPredicted RBP22.39■■□□□ 1.17
CKMT1B-205ENST00000437534 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
CKMT1B-205ENST00000437534 CUX1P39880 1505 aa22.3■■□□□ 1.16
CKMT1B-205ENST00000437534 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
CKMT1B-205ENST00000437534 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
CKMT1B-205ENST00000437534 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
CKMT1B-205ENST00000437534 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
CKMT1B-205ENST00000437534 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
CKMT1B-205ENST00000437534 MAP3K1Q13233 1512 aa22.19■■□□□ 1.14
CKMT1B-205ENST00000437534 CFTRP13569 1480 aa22.19■■□□□ 1.14
CKMT1B-205ENST00000437534 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
CKMT1B-205ENST00000437534 MAPKBP1O60336 1514 aa22.1■■□□□ 1.13
CKMT1B-205ENST00000437534 TIAM1Q13009 1591 aa22.09■■□□□ 1.13
CKMT1B-205ENST00000437534 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
CKMT1B-205ENST00000437534 IGF1RP08069 1367 aa22.05■■□□□ 1.12
CKMT1B-205ENST00000437534 ITGAEP38570 1179 aa22.04■■□□□ 1.12
CKMT1B-205ENST00000437534 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
CKMT1B-205ENST00000437534 LRRC9Q6ZRR7 1453 aa22.01■■□□□ 1.11
CKMT1B-205ENST00000437534 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
CKMT1B-205ENST00000437534 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms