RNA–Protein interactions for RNA: ENST00000435878.1

AP001595.1-201, humanhuman

TSL 2 BASIC

Gene AP001595.1, Length 516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001595.1-201ENST00000435878 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
AP001595.1-201ENST00000435878 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
AP001595.1-201ENST00000435878 PHF23Q9BUL5 403 aaPredicted RBP21.9■■□□□ 1.1
AP001595.1-201ENST00000435878 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
AP001595.1-201ENST00000435878 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
AP001595.1-201ENST00000435878 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
AP001595.1-201ENST00000435878 FOXD1Q16676 465 aa19.62■□□□□ 0.73
AP001595.1-201ENST00000435878 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
AP001595.1-201ENST00000435878 ADRA2BP18089 450 aa19.14■□□□□ 0.65
AP001595.1-201ENST00000435878 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
AP001595.1-201ENST00000435878 ABCC9O60706 1549 aa18.28■□□□□ 0.52
AP001595.1-201ENST00000435878 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
AP001595.1-201ENST00000435878 KCNA4P22459 653 aa17.89■□□□□ 0.45
AP001595.1-201ENST00000435878 MSH5O43196 834 aa17.88■□□□□ 0.45
AP001595.1-201ENST00000435878 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
AP001595.1-201ENST00000435878 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
AP001595.1-201ENST00000435878 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
AP001595.1-201ENST00000435878 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
AP001595.1-201ENST00000435878 NACADO15069 1562 aa17.3■□□□□ 0.36
AP001595.1-201ENST00000435878 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
AP001595.1-201ENST00000435878 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
AP001595.1-201ENST00000435878 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
AP001595.1-201ENST00000435878 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.36
AP001595.1-201ENST00000435878 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
AP001595.1-201ENST00000435878 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
AP001595.1-201ENST00000435878 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
AP001595.1-201ENST00000435878 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
AP001595.1-201ENST00000435878 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.31
AP001595.1-201ENST00000435878 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
AP001595.1-201ENST00000435878 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
AP001595.1-201ENST00000435878 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
AP001595.1-201ENST00000435878 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
AP001595.1-201ENST00000435878 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
AP001595.1-201ENST00000435878 DCAF1Q9Y4B6 1507 aa16.88■□□□□ 0.29
AP001595.1-201ENST00000435878 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
AP001595.1-201ENST00000435878 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
AP001595.1-201ENST00000435878 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
AP001595.1-201ENST00000435878 SCRIBQ14160 1630 aa16.62■□□□□ 0.25
AP001595.1-201ENST00000435878 ZBTB22O15209 634 aa16.54■□□□□ 0.24
AP001595.1-201ENST00000435878 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
AP001595.1-201ENST00000435878 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
AP001595.1-201ENST00000435878 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
AP001595.1-201ENST00000435878 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
AP001595.1-201ENST00000435878 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
AP001595.1-201ENST00000435878 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
AP001595.1-201ENST00000435878 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
AP001595.1-201ENST00000435878 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.14
AP001595.1-201ENST00000435878 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
AP001595.1-201ENST00000435878 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
AP001595.1-201ENST00000435878 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
AP001595.1-201ENST00000435878 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
AP001595.1-201ENST00000435878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
AP001595.1-201ENST00000435878 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
AP001595.1-201ENST00000435878 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
AP001595.1-201ENST00000435878 CUX2O14529 1486 aa15.78■□□□□ 0.12
AP001595.1-201ENST00000435878 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
AP001595.1-201ENST00000435878 ERCC6Q03468 1493 aa15.76■□□□□ 0.11
AP001595.1-201ENST00000435878 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
AP001595.1-201ENST00000435878 U3KPZ7 1027 aaPredicted RBP15.75■□□□□ 0.11
AP001595.1-201ENST00000435878 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
AP001595.1-201ENST00000435878 NESP48681 1621 aa15.73■□□□□ 0.11
AP001595.1-201ENST00000435878 MROH2BQ7Z745 1585 aa15.73■□□□□ 0.11
AP001595.1-201ENST00000435878 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
AP001595.1-201ENST00000435878 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
AP001595.1-201ENST00000435878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
AP001595.1-201ENST00000435878 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
AP001595.1-201ENST00000435878 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
AP001595.1-201ENST00000435878 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
AP001595.1-201ENST00000435878 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
AP001595.1-201ENST00000435878 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
AP001595.1-201ENST00000435878 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
AP001595.1-201ENST00000435878 WIZO95785 1651 aa15.49■□□□□ 0.07
AP001595.1-201ENST00000435878 KIF21AQ7Z4S6 1674 aa15.46■□□□□ 0.07
AP001595.1-201ENST00000435878 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
AP001595.1-201ENST00000435878 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
AP001595.1-201ENST00000435878 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
AP001595.1-201ENST00000435878 WDR62O43379 1518 aa15.35■□□□□ 0.05
AP001595.1-201ENST00000435878 CFTRP13569 1480 aa15.34■□□□□ 0.05
AP001595.1-201ENST00000435878 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
AP001595.1-201ENST00000435878 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
AP001595.1-201ENST00000435878 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
AP001595.1-201ENST00000435878 APLP2Q06481 763 aa15.26■□□□□ 0.03
AP001595.1-201ENST00000435878 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
AP001595.1-201ENST00000435878 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
AP001595.1-201ENST00000435878 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
AP001595.1-201ENST00000435878 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
AP001595.1-201ENST00000435878 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
AP001595.1-201ENST00000435878 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
AP001595.1-201ENST00000435878 PRDM2Q13029 1718 aa15.06■□□□□ 0
AP001595.1-201ENST00000435878 TRIM41Q8WV44 630 aa15.05■□□□□ -0
AP001595.1-201ENST00000435878 TOPBP1Q92547 1522 aa15.02■□□□□ -0
AP001595.1-201ENST00000435878 IFT140Q96RY7 1462 aa15.02■□□□□ -0
AP001595.1-201ENST00000435878 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
AP001595.1-201ENST00000435878 ZNF608Q9ULD9 1512 aaPredicted RBP15.02□□□□□ -0.01
AP001595.1-201ENST00000435878 CAPN15O75808 1086 aa15.01□□□□□ -0.01
AP001595.1-201ENST00000435878 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
AP001595.1-201ENST00000435878 FKBP8Q14318 412 aa14.96□□□□□ -0.01
AP001595.1-201ENST00000435878 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
AP001595.1-201ENST00000435878 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
AP001595.1-201ENST00000435878 POLA2Q14181 598 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms