RNA–Protein interactions for RNA: ENST00000434838.6

NBPF3-204, Transcript of NBPF member 3, humanhuman

TSL 5

Gene NBPF3, Length 2,727 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-204ENST00000434838 NISCHQ9Y2I1 1504 aa17.78■□□□□ 0.44
NBPF3-204ENST00000434838 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0.01
NBPF3-204ENST00000434838 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0
NBPF3-204ENST00000434838 SHROOM4Q9ULL8 1493 aa15.05■□□□□ 0
NBPF3-204ENST00000434838 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
NBPF3-204ENST00000434838 DCAF1Q9Y4B6 1507 aa14.69□□□□□ -0.06
NBPF3-204ENST00000434838 SLC24A1O60721 1099 aa14.63□□□□□ -0.07
NBPF3-204ENST00000434838 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
NBPF3-204ENST00000434838 MYO15BQ96JP2 1530 aa14.53□□□□□ -0.08
NBPF3-204ENST00000434838 DCAF8L2P0C7V8 631 aa14.5□□□□□ -0.09
NBPF3-204ENST00000434838 HRCP23327 699 aa14.37□□□□□ -0.11
NBPF3-204ENST00000434838 AEBP2Q6ZN18 517 aaPredicted RBP14.23□□□□□ -0.13
NBPF3-204ENST00000434838 ABCC9O60706 1549 aa14.23□□□□□ -0.13
NBPF3-204ENST00000434838 PCGF6Q9BYE7 350 aa14.19□□□□□ -0.14
NBPF3-204ENST00000434838 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
NBPF3-204ENST00000434838 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
NBPF3-204ENST00000434838 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
NBPF3-204ENST00000434838 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
NBPF3-204ENST00000434838 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
NBPF3-204ENST00000434838 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
NBPF3-204ENST00000434838 MYT1Q01538 1121 aa13.99□□□□□ -0.17
NBPF3-204ENST00000434838 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
NBPF3-204ENST00000434838 NACADO15069 1562 aa13.93□□□□□ -0.18
NBPF3-204ENST00000434838 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
NBPF3-204ENST00000434838 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
NBPF3-204ENST00000434838 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
NBPF3-204ENST00000434838 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
NBPF3-204ENST00000434838 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
NBPF3-204ENST00000434838 WIZO95785 1651 aa13.68□□□□□ -0.22
NBPF3-204ENST00000434838 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
NBPF3-204ENST00000434838 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
NBPF3-204ENST00000434838 PRKCSHP14314 528 aaPredicted RBP13.66□□□□□ -0.22
NBPF3-204ENST00000434838 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
NBPF3-204ENST00000434838 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
NBPF3-204ENST00000434838 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
NBPF3-204ENST00000434838 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
NBPF3-204ENST00000434838 SMARCA4P51532 1647 aa13.49□□□□□ -0.25
NBPF3-204ENST00000434838 CCDC88BA6NC98 1476 aa13.47□□□□□ -0.25
NBPF3-204ENST00000434838 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.25
NBPF3-204ENST00000434838 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
NBPF3-204ENST00000434838 RTN4Q9NQC3 1192 aaKnown RBP13.41□□□□□ -0.26
NBPF3-204ENST00000434838 EEA1Q15075 1411 aa13.4□□□□□ -0.26
NBPF3-204ENST00000434838 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
NBPF3-204ENST00000434838 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
NBPF3-204ENST00000434838 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
NBPF3-204ENST00000434838 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
NBPF3-204ENST00000434838 SOGA1O94964 1423 aa13.33□□□□□ -0.27
NBPF3-204ENST00000434838 APLP2Q06481 763 aa13.32□□□□□ -0.28
NBPF3-204ENST00000434838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
NBPF3-204ENST00000434838 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
NBPF3-204ENST00000434838 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
NBPF3-204ENST00000434838 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
NBPF3-204ENST00000434838 SCAF1Q9H7N4 1312 aaKnown RBP13.26□□□□□ -0.29
NBPF3-204ENST00000434838 BICRAQ9NZM4 1560 aa13.26□□□□□ -0.29
NBPF3-204ENST00000434838 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
NBPF3-204ENST00000434838 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
NBPF3-204ENST00000434838 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
NBPF3-204ENST00000434838 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
NBPF3-204ENST00000434838 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
NBPF3-204ENST00000434838 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
NBPF3-204ENST00000434838 KIF21BO75037 1637 aa13.17□□□□□ -0.3
NBPF3-204ENST00000434838 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
NBPF3-204ENST00000434838 ACIN1Q9UKV3 1341 aaKnown RBP13.14□□□□□ -0.31
NBPF3-204ENST00000434838 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
NBPF3-204ENST00000434838 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
NBPF3-204ENST00000434838 SYNJ1O43426 1573 aa13.13□□□□□ -0.31
NBPF3-204ENST00000434838 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
NBPF3-204ENST00000434838 CLIP1P30622 1438 aa13.08□□□□□ -0.32
NBPF3-204ENST00000434838 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
NBPF3-204ENST00000434838 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
NBPF3-204ENST00000434838 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
NBPF3-204ENST00000434838 CENPBP07199 599 aaPredicted RBP13.05□□□□□ -0.32
NBPF3-204ENST00000434838 KCNA4P22459 653 aa13.03□□□□□ -0.32
NBPF3-204ENST00000434838 DAXXQ9UER7 740 aaPredicted RBP13.02□□□□□ -0.32
NBPF3-204ENST00000434838 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
NBPF3-204ENST00000434838 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
NBPF3-204ENST00000434838 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
NBPF3-204ENST00000434838 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
NBPF3-204ENST00000434838 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.34
NBPF3-204ENST00000434838 PRXQ9BXM0 1461 aa12.95□□□□□ -0.34
NBPF3-204ENST00000434838 HNRNPUL2Q1KMD3 747 aaKnown RBP12.94□□□□□ -0.34
NBPF3-204ENST00000434838 BCL11AQ9H165 835 aa12.94□□□□□ -0.34
NBPF3-204ENST00000434838 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
NBPF3-204ENST00000434838 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
NBPF3-204ENST00000434838 CLSPNQ9HAW4 1339 aa12.91□□□□□ -0.34
NBPF3-204ENST00000434838 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
NBPF3-204ENST00000434838 HMGXB3Q12766 1538 aa12.9□□□□□ -0.34
NBPF3-204ENST00000434838 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
NBPF3-204ENST00000434838 CUX1P39880 1505 aa12.83□□□□□ -0.36
NBPF3-204ENST00000434838 MIER1Q8N108 512 aa12.83□□□□□ -0.36
NBPF3-204ENST00000434838 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
NBPF3-204ENST00000434838 RRBP1Q9P2E9 1410 aaKnown RBP12.81□□□□□ -0.36
NBPF3-204ENST00000434838 CFTRP13569 1480 aa12.81□□□□□ -0.36
NBPF3-204ENST00000434838 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
NBPF3-204ENST00000434838 CUX2O14529 1486 aa12.79□□□□□ -0.36
NBPF3-204ENST00000434838 KANK4Q5T7N3 995 aaPredicted RBP12.77□□□□□ -0.37
NBPF3-204ENST00000434838 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
NBPF3-204ENST00000434838 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
NBPF3-204ENST00000434838 YTHDC1Q96MU7 727 aaKnown RBP12.72□□□□□ -0.37
NBPF3-204ENST00000434838 MAP3K1Q13233 1512 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms