RNA–Protein interactions for RNA: ENST00000426809.5

CFTR-202, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 4,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-202ENST00000426809 NISCHQ9Y2I1 1504 aa9.46□□□□□ -0.89
CFTR-202ENST00000426809 AEBP2Q6ZN18 517 aaPredicted RBP8.53□□□□□ -1.04
CFTR-202ENST00000426809 CHIC1Q5VXU3 224 aa8.43□□□□□ -1.06
CFTR-202ENST00000426809 SHROOM4Q9ULL8 1493 aa8.42□□□□□ -1.06
CFTR-202ENST00000426809 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
CFTR-202ENST00000426809 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
CFTR-202ENST00000426809 CCDC180Q9P1Z9 1646 aa8.23□□□□□ -1.09
CFTR-202ENST00000426809 ZCCHC6Q5VYS8 1495 aaKnown RBP7.97□□□□□ -1.13
CFTR-202ENST00000426809 PCGF6Q9BYE7 350 aa7.92□□□□□ -1.14
CFTR-202ENST00000426809 HRCP23327 699 aa7.82□□□□□ -1.16
CFTR-202ENST00000426809 EHMT2Q96KQ7 1210 aa7.79□□□□□ -1.16
CFTR-202ENST00000426809 LOC105371045A0A1W2PR82 267 aa7.78□□□□□ -1.16
CFTR-202ENST00000426809 MYO15BQ96JP2 1530 aa7.78□□□□□ -1.16
CFTR-202ENST00000426809 FAM9AQ8IZU1 332 aaPredicted RBP7.78□□□□□ -1.16
CFTR-202ENST00000426809 TRIM41Q8WV44 630 aa7.76□□□□□ -1.17
CFTR-202ENST00000426809 ABCC9O60706 1549 aa7.75□□□□□ -1.17
CFTR-202ENST00000426809 DCAF1Q9Y4B6 1507 aa7.74□□□□□ -1.17
CFTR-202ENST00000426809 NACADO15069 1562 aa7.74□□□□□ -1.17
CFTR-202ENST00000426809 RB1CC1Q8TDY2 1594 aa7.7□□□□□ -1.18
CFTR-202ENST00000426809 TRIM26Q12899 539 aaPredicted RBP7.69□□□□□ -1.18
CFTR-202ENST00000426809 PPARGC1BQ86YN6 1023 aaKnown RBP7.67□□□□□ -1.18
CFTR-202ENST00000426809 ZEB1P37275 1124 aaPredicted RBP7.62□□□□□ -1.19
CFTR-202ENST00000426809 SCRIBQ14160 1630 aa7.62□□□□□ -1.19
CFTR-202ENST00000426809 RSF1Q96T23 1441 aaPredicted RBP7.55□□□□□ -1.2
CFTR-202ENST00000426809 TTBK1Q5TCY1 1321 aaPredicted RBP7.55□□□□□ -1.2
CFTR-202ENST00000426809 PHF23Q9BUL5 403 aaPredicted RBP7.52□□□□□ -1.21
CFTR-202ENST00000426809 CCER1Q8TC90 406 aaPredicted RBP7.51□□□□□ -1.21
CFTR-202ENST00000426809 UBTFP17480 764 aaKnown RBP7.47□□□□□ -1.21
CFTR-202ENST00000426809 APLP2Q06481 763 aa7.43□□□□□ -1.22
CFTR-202ENST00000426809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.41□□□□□ -1.22
CFTR-202ENST00000426809 CECR2Q9BXF3 1484 aa7.41□□□□□ -1.22
CFTR-202ENST00000426809 RANGAP1P46060 587 aaPredicted RBP7.39□□□□□ -1.23
CFTR-202ENST00000426809 PABPN1Q86U42 306 aaKnown RBP eCLIP7.37□□□□□ -1.23
CFTR-202ENST00000426809 MROH2BQ7Z745 1585 aa7.37□□□□□ -1.23
CFTR-202ENST00000426809 CENPBP07199 599 aaPredicted RBP7.35□□□□□ -1.23
CFTR-202ENST00000426809 CSRNP3Q8WYN3 585 aa7.32□□□□□ -1.24
CFTR-202ENST00000426809 BAZ1AQ9NRL2 1556 aaPredicted RBP7.31□□□□□ -1.24
CFTR-202ENST00000426809 WIZO95785 1651 aa7.31□□□□□ -1.24
CFTR-202ENST00000426809 PELP1Q8IZL8 1130 aaKnown RBP7.3□□□□□ -1.24
CFTR-202ENST00000426809 HNRNPUL2Q1KMD3 747 aaKnown RBP7.3□□□□□ -1.24
CFTR-202ENST00000426809 DIEXFQ68CQ4 756 aaKnown RBP7.29□□□□□ -1.24
CFTR-202ENST00000426809 YTHDC1Q96MU7 727 aaKnown RBP7.26□□□□□ -1.25
CFTR-202ENST00000426809 UNC13AQ9UPW8 1703 aa7.25□□□□□ -1.25
CFTR-202ENST00000426809 CEP162Q5TB80 1403 aa7.25□□□□□ -1.25
CFTR-202ENST00000426809 BICRAQ9NZM4 1560 aa7.24□□□□□ -1.25
CFTR-202ENST00000426809 ABCC8Q09428 1581 aa7.23□□□□□ -1.25
CFTR-202ENST00000426809 CCDC88BA6NC98 1476 aa7.23□□□□□ -1.25
CFTR-202ENST00000426809 EEA1Q15075 1411 aa7.22□□□□□ -1.25
CFTR-202ENST00000426809 SOGA1O94964 1423 aa7.21□□□□□ -1.25
CFTR-202ENST00000426809 TNIKQ9UKE5 1360 aa7.21□□□□□ -1.25
CFTR-202ENST00000426809 TOP2AP11388 1531 aaKnown RBP7.21□□□□□ -1.25
CFTR-202ENST00000426809 SCAF1Q9H7N4 1312 aaKnown RBP7.2□□□□□ -1.26
CFTR-202ENST00000426809 ACIN1Q9UKV3 1341 aaKnown RBP7.2□□□□□ -1.26
CFTR-202ENST00000426809 ZNF316A6NFI3 1004 aaPredicted RBP7.2□□□□□ -1.26
CFTR-202ENST00000426809 GOLGA3Q08378 1498 aa7.19□□□□□ -1.26
CFTR-202ENST00000426809 WRNQ14191 1432 aaPredicted RBP eCLIP7.19□□□□□ -1.26
CFTR-202ENST00000426809 SMARCA4P51532 1647 aa7.18□□□□□ -1.26
CFTR-202ENST00000426809 GTF3C3Q9Y5Q9 886 aa7.18□□□□□ -1.26
CFTR-202ENST00000426809 CLIP1P30622 1438 aa7.16□□□□□ -1.26
CFTR-202ENST00000426809 ITGAEP38570 1179 aa7.16□□□□□ -1.26
CFTR-202ENST00000426809 ATP1B4Q9UN42 357 aaPredicted RBP7.16□□□□□ -1.26
CFTR-202ENST00000426809 SMARCA2P51531 1590 aa7.15□□□□□ -1.26
CFTR-202ENST00000426809 NEUROD1Q13562 356 aa7.15□□□□□ -1.26
CFTR-202ENST00000426809 CEP164Q9UPV0 1460 aa7.14□□□□□ -1.27
CFTR-202ENST00000426809 BAZ1BQ9UIG0 1483 aaKnown RBP7.13□□□□□ -1.27
CFTR-202ENST00000426809 EIF4G1Q04637 1599 aaKnown RBP7.13□□□□□ -1.27
CFTR-202ENST00000426809 RUSC2Q8N2Y8 1516 aa7.12□□□□□ -1.27
CFTR-202ENST00000426809 NCAPD3P42695 1498 aa7.08□□□□□ -1.28
CFTR-202ENST00000426809 HMGXB3Q12766 1538 aa7.07□□□□□ -1.28
CFTR-202ENST00000426809 PEG3Q9GZU2 1588 aa7.07□□□□□ -1.28
CFTR-202ENST00000426809 VPS8Q8N3P4 1428 aa7.06□□□□□ -1.28
CFTR-202ENST00000426809 MIER1Q8N108 512 aa7.06□□□□□ -1.28
CFTR-202ENST00000426809 FAM50AQ14320 339 aaKnown RBP7.05□□□□□ -1.28
CFTR-202ENST00000426809 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
CFTR-202ENST00000426809 CC2D2AQ9P2K1 1620 aa7.04□□□□□ -1.28
CFTR-202ENST00000426809 SENP3Q9H4L4 574 aaPredicted RBP7.03□□□□□ -1.28
CFTR-202ENST00000426809 RAPGEF2Q9Y4G8 1499 aa7.02□□□□□ -1.29
CFTR-202ENST00000426809 KIF27Q86VH2 1401 aa7.01□□□□□ -1.29
CFTR-202ENST00000426809 P3H3Q8IVL6 736 aa7.01□□□□□ -1.29
CFTR-202ENST00000426809 SYNJ1O43426 1573 aa6.99□□□□□ -1.29
CFTR-202ENST00000426809 MYT1Q01538 1121 aa6.99□□□□□ -1.29
CFTR-202ENST00000426809 KIF21BO75037 1637 aa6.98□□□□□ -1.29
CFTR-202ENST00000426809 NEFLP07196 543 aa6.97□□□□□ -1.29
CFTR-202ENST00000426809 KANK4Q5T7N3 995 aaPredicted RBP6.97□□□□□ -1.29
CFTR-202ENST00000426809 CLSPNQ9HAW4 1339 aa6.97□□□□□ -1.29
CFTR-202ENST00000426809 CCNB3Q8WWL7 1395 aa6.94□□□□□ -1.3
CFTR-202ENST00000426809 CUX2O14529 1486 aa6.93□□□□□ -1.3
CFTR-202ENST00000426809 PDS5BQ9NTI5 1447 aa6.91□□□□□ -1.3
CFTR-202ENST00000426809 DHX57Q6P158 1386 aaKnown RBP6.91□□□□□ -1.3
CFTR-202ENST00000426809 LAMC3Q9Y6N6 1575 aa6.91□□□□□ -1.3
CFTR-202ENST00000426809 CARMIL1Q5VZK9 1371 aa6.91□□□□□ -1.3
CFTR-202ENST00000426809 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
CFTR-202ENST00000426809 BCANQ96GW7 911 aa6.9□□□□□ -1.3
CFTR-202ENST00000426809 TOP2BQ02880 1626 aa6.9□□□□□ -1.3
CFTR-202ENST00000426809 ANP32CO43423 234 aa6.9□□□□□ -1.31
CFTR-202ENST00000426809 TRIM52Q96A61 297 aa6.88□□□□□ -1.31
CFTR-202ENST00000426809 ERICH3Q5RHP9 1530 aa6.88□□□□□ -1.31
CFTR-202ENST00000426809 PRXQ9BXM0 1461 aa6.88□□□□□ -1.31
CFTR-202ENST00000426809 TONSLQ96HA7 1378 aa6.87□□□□□ -1.31
CFTR-202ENST00000426809 CADPSQ9ULU8 1353 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms