RNA–Protein interactions for RNA: ENST00000420625.6

PLS3-203, Transcript of plastin 3, humanhuman

TSL 5 BASIC

Gene PLS3, Length 3,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-203ENST00000420625 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
PLS3-203ENST00000420625 CHIC1Q5VXU3 224 aa13.07□□□□□ -0.32
PLS3-203ENST00000420625 PHF23Q9BUL5 403 aaPredicted RBP11.63□□□□□ -0.55
PLS3-203ENST00000420625 SENP3Q9H4L4 574 aaPredicted RBP11.06□□□□□ -0.64
PLS3-203ENST00000420625 PLPPR3Q6T4P5 718 aa10.68□□□□□ -0.7
PLS3-203ENST00000420625 FOXD1Q16676 465 aa10.39□□□□□ -0.75
PLS3-203ENST00000420625 PPP6R1Q9UPN7 881 aa10.24□□□□□ -0.77
PLS3-203ENST00000420625 ADRA2BP18089 450 aa10.22□□□□□ -0.77
PLS3-203ENST00000420625 NISCHQ9Y2I1 1504 aa9.87□□□□□ -0.83
PLS3-203ENST00000420625 PIAS4Q8N2W9 510 aaPredicted RBP9.81□□□□□ -0.84
PLS3-203ENST00000420625 KCNA4P22459 653 aa9.61□□□□□ -0.87
PLS3-203ENST00000420625 PPP4R3CPQ6ZMV5 832 aa9.47□□□□□ -0.89
PLS3-203ENST00000420625 MSH5O43196 834 aa9.33□□□□□ -0.92
PLS3-203ENST00000420625 MAPK8IP2Q13387 824 aaPredicted RBP9.26□□□□□ -0.93
PLS3-203ENST00000420625 NPM3O75607 178 aaKnown RBP9.2□□□□□ -0.94
PLS3-203ENST00000420625 NCBP3Q53F19 620 aaKnown RBP9.2□□□□□ -0.94
PLS3-203ENST00000420625 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
PLS3-203ENST00000420625 CCDC180Q9P1Z9 1646 aa9.19□□□□□ -0.94
PLS3-203ENST00000420625 CNKSR2Q8WXI2 1034 aa9.12□□□□□ -0.95
PLS3-203ENST00000420625 SLC4A1APQ9BWU0 796 aaKnown RBP9.11□□□□□ -0.95
PLS3-203ENST00000420625 SCAF1Q9H7N4 1312 aaKnown RBP9.11□□□□□ -0.95
PLS3-203ENST00000420625 CSRNP3Q8WYN3 585 aa9.01□□□□□ -0.97
PLS3-203ENST00000420625 ZBTB22O15209 634 aa8.91□□□□□ -0.98
PLS3-203ENST00000420625 RNF216Q9NWF9 866 aaPredicted RBP8.89□□□□□ -0.99
PLS3-203ENST00000420625 DMRT2Q9Y5R5 561 aa8.89□□□□□ -0.99
PLS3-203ENST00000420625 DNAJC5BQ9UF47 199 aa8.86□□□□□ -0.99
PLS3-203ENST00000420625 HOXD11P31277 338 aaPredicted RBP8.81□□□□□ -1
PLS3-203ENST00000420625 FOXD4L1Q9NU39 408 aa8.68□□□□□ -1.02
PLS3-203ENST00000420625 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
PLS3-203ENST00000420625 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
PLS3-203ENST00000420625 DCAF8L1A6NGE4 600 aa8.62□□□□□ -1.03
PLS3-203ENST00000420625 DCAF1Q9Y4B6 1507 aa8.51□□□□□ -1.05
PLS3-203ENST00000420625 NACADO15069 1562 aa8.49□□□□□ -1.05
PLS3-203ENST00000420625 SHROOM4Q9ULL8 1493 aa8.48□□□□□ -1.05
PLS3-203ENST00000420625 RB1CC1Q8TDY2 1594 aa8.44□□□□□ -1.06
PLS3-203ENST00000420625 MYCNP04198 464 aaPredicted RBP8.42□□□□□ -1.06
PLS3-203ENST00000420625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.4□□□□□ -1.06
PLS3-203ENST00000420625 U3KPZ7 1027 aaPredicted RBP8.34□□□□□ -1.07
PLS3-203ENST00000420625 ATF5Q9Y2D1 282 aaPredicted RBP8.34□□□□□ -1.07
PLS3-203ENST00000420625 ATXN8OSP0DMR3 200 aa8.33□□□□□ -1.08
PLS3-203ENST00000420625 POTEDQ86YR6 584 aa8.33□□□□□ -1.08
PLS3-203ENST00000420625 ABCC9O60706 1549 aa8.3□□□□□ -1.08
PLS3-203ENST00000420625 ZCCHC6Q5VYS8 1495 aaKnown RBP8.28□□□□□ -1.08
PLS3-203ENST00000420625 UNC13AQ9UPW8 1703 aa8.23□□□□□ -1.09
PLS3-203ENST00000420625 SAMD1Q6SPF0 538 aaPredicted RBP8.18□□□□□ -1.1
PLS3-203ENST00000420625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.16□□□□□ -1.1
PLS3-203ENST00000420625 HNRNPUL2Q1KMD3 747 aaKnown RBP8.16□□□□□ -1.1
PLS3-203ENST00000420625 SPINK5Q9NQ38 1064 aaPredicted RBP8.12□□□□□ -1.11
PLS3-203ENST00000420625 RNF39Q9H2S5 420 aa8.11□□□□□ -1.11
PLS3-203ENST00000420625 BICRAQ9NZM4 1560 aa8.1□□□□□ -1.11
PLS3-203ENST00000420625 FKBP8Q14318 412 aa8.07□□□□□ -1.12
PLS3-203ENST00000420625 ZNF219Q9P2Y4 722 aaPredicted RBP8.05□□□□□ -1.12
PLS3-203ENST00000420625 TRHP20396 242 aaPredicted RBP8.04□□□□□ -1.12
PLS3-203ENST00000420625 CAPN15O75808 1086 aa8□□□□□ -1.13
PLS3-203ENST00000420625 APLP2Q06481 763 aa7.95□□□□□ -1.14
PLS3-203ENST00000420625 MKRN4PQ13434 485 aaPredicted RBP7.95□□□□□ -1.14
PLS3-203ENST00000420625 ABCB7O75027 752 aa7.94□□□□□ -1.14
PLS3-203ENST00000420625 POLA2Q14181 598 aa7.94□□□□□ -1.14
PLS3-203ENST00000420625 C1QBPQ07021 282 aaKnown RBP7.94□□□□□ -1.14
PLS3-203ENST00000420625 PEG3Q9GZU2 1588 aa7.87□□□□□ -1.15
PLS3-203ENST00000420625 SMARCA2P51531 1590 aa7.86□□□□□ -1.15
PLS3-203ENST00000420625 RTN4Q9NQC3 1192 aaKnown RBP7.85□□□□□ -1.15
PLS3-203ENST00000420625 EIF4G1Q04637 1599 aaKnown RBP7.85□□□□□ -1.15
PLS3-203ENST00000420625 SCRIBQ14160 1630 aa7.83□□□□□ -1.16
PLS3-203ENST00000420625 DSG3P32926 999 aa7.82□□□□□ -1.16
PLS3-203ENST00000420625 HMGXB3Q12766 1538 aa7.81□□□□□ -1.16
PLS3-203ENST00000420625 SPDYE4A6NLX3 237 aa7.8□□□□□ -1.16
PLS3-203ENST00000420625 CC2D2AQ9P2K1 1620 aa7.78□□□□□ -1.16
PLS3-203ENST00000420625 CACNB1Q02641 598 aaPredicted RBP7.77□□□□□ -1.17
PLS3-203ENST00000420625 PROM2Q8N271 834 aa7.77□□□□□ -1.17
PLS3-203ENST00000420625 FBLN2P98095 1184 aa7.76□□□□□ -1.17
PLS3-203ENST00000420625 AMER1Q5JTC6 1135 aaPredicted RBP7.74□□□□□ -1.17
PLS3-203ENST00000420625 BAZ1AQ9NRL2 1556 aaPredicted RBP7.73□□□□□ -1.17
PLS3-203ENST00000420625 SMARCA4P51532 1647 aa7.72□□□□□ -1.17
PLS3-203ENST00000420625 NCAPD3P42695 1498 aa7.71□□□□□ -1.18
PLS3-203ENST00000420625 OSCARQ8IYS5 282 aa7.69□□□□□ -1.18
PLS3-203ENST00000420625 PRDM2Q13029 1718 aa7.67□□□□□ -1.18
PLS3-203ENST00000420625 ZBTB12Q9Y330 459 aaPredicted RBP7.67□□□□□ -1.18
PLS3-203ENST00000420625 CUX2O14529 1486 aa7.64□□□□□ -1.19
PLS3-203ENST00000420625 CECR2Q9BXF3 1484 aa7.63□□□□□ -1.19
PLS3-203ENST00000420625 FBXO3Q9UK99 471 aa7.62□□□□□ -1.19
PLS3-203ENST00000420625 LAMC3Q9Y6N6 1575 aa7.61□□□□□ -1.19
PLS3-203ENST00000420625 VASPP50552 380 aaPredicted RBP7.59□□□□□ -1.19
PLS3-203ENST00000420625 ZNF692Q9BU19 519 aaPredicted RBP7.58□□□□□ -1.2
PLS3-203ENST00000420625 ATAD2BQ9ULI0 1458 aa7.58□□□□□ -1.2
PLS3-203ENST00000420625 IFNLR1Q8IU57 520 aaPredicted RBP7.57□□□□□ -1.2
PLS3-203ENST00000420625 SSUH2Q9Y2M2 353 aa7.57□□□□□ -1.2
PLS3-203ENST00000420625 SPDYE2BA6NHP3 402 aa7.53□□□□□ -1.2
PLS3-203ENST00000420625 SPDYE6P0CI01 402 aa7.53□□□□□ -1.2
PLS3-203ENST00000420625 SPDYE2Q495Y8 402 aa7.53□□□□□ -1.2
PLS3-203ENST00000420625 WDR97A6NE52 1622 aa7.52□□□□□ -1.21
PLS3-203ENST00000420625 PABPN1Q86U42 306 aaKnown RBP eCLIP7.51□□□□□ -1.21
PLS3-203ENST00000420625 TOP2AP11388 1531 aaKnown RBP7.51□□□□□ -1.21
PLS3-203ENST00000420625 THOC2Q8NI27 1593 aaKnown RBP7.49□□□□□ -1.21
PLS3-203ENST00000420625 BAZ1BQ9UIG0 1483 aaKnown RBP7.49□□□□□ -1.21
PLS3-203ENST00000420625 MROH2BQ7Z745 1585 aa7.44□□□□□ -1.22
PLS3-203ENST00000420625 WDR62O43379 1518 aa7.44□□□□□ -1.22
PLS3-203ENST00000420625 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
PLS3-203ENST00000420625 PKD2Q13563 968 aa7.42□□□□□ -1.22
PLS3-203ENST00000420625 STAG3Q9UJ98 1225 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms