RNA–Protein interactions for RNA: ENST00000418334.5

ATP1A4-202, Transcript of ATPase Na+/K+ transporting subunit alpha 4, humanhuman

TSL 2

Gene ATP1A4, Length 2,062 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A4-202ENST00000418334 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
ATP1A4-202ENST00000418334 HRCP23327 699 aa20.12■□□□□ 0.81
ATP1A4-202ENST00000418334 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
ATP1A4-202ENST00000418334 MYO15BQ96JP2 1530 aa19.55■□□□□ 0.72
ATP1A4-202ENST00000418334 PPARGC1BQ86YN6 1023 aaKnown RBP19.48■□□□□ 0.71
ATP1A4-202ENST00000418334 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
ATP1A4-202ENST00000418334 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
ATP1A4-202ENST00000418334 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
ATP1A4-202ENST00000418334 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
ATP1A4-202ENST00000418334 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
ATP1A4-202ENST00000418334 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
ATP1A4-202ENST00000418334 ZCCHC6Q5VYS8 1495 aaKnown RBP19.04■□□□□ 0.64
ATP1A4-202ENST00000418334 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
ATP1A4-202ENST00000418334 MYT1Q01538 1121 aa19.02■□□□□ 0.63
ATP1A4-202ENST00000418334 TRIM26Q12899 539 aaPredicted RBP18.96■□□□□ 0.63
ATP1A4-202ENST00000418334 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
ATP1A4-202ENST00000418334 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
ATP1A4-202ENST00000418334 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
ATP1A4-202ENST00000418334 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
ATP1A4-202ENST00000418334 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
ATP1A4-202ENST00000418334 CENPBP07199 599 aaPredicted RBP18.29■□□□□ 0.52
ATP1A4-202ENST00000418334 ABCC9O60706 1549 aa18.14■□□□□ 0.5
ATP1A4-202ENST00000418334 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
ATP1A4-202ENST00000418334 TRIM41Q8WV44 630 aa18■□□□□ 0.47
ATP1A4-202ENST00000418334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
ATP1A4-202ENST00000418334 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
ATP1A4-202ENST00000418334 DCAF8L2P0C7V8 631 aa17.96■□□□□ 0.47
ATP1A4-202ENST00000418334 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
ATP1A4-202ENST00000418334 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
ATP1A4-202ENST00000418334 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
ATP1A4-202ENST00000418334 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
ATP1A4-202ENST00000418334 ZNF316A6NFI3 1004 aaPredicted RBP17.81■□□□□ 0.44
ATP1A4-202ENST00000418334 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
ATP1A4-202ENST00000418334 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
ATP1A4-202ENST00000418334 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
ATP1A4-202ENST00000418334 MIER1Q8N108 512 aa17.62■□□□□ 0.41
ATP1A4-202ENST00000418334 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
ATP1A4-202ENST00000418334 ANP32EQ9BTT0 268 aa17.58■□□□□ 0.4
ATP1A4-202ENST00000418334 BCL11AQ9H165 835 aa17.58■□□□□ 0.4
ATP1A4-202ENST00000418334 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
ATP1A4-202ENST00000418334 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
ATP1A4-202ENST00000418334 SUPT16HQ9Y5B9 1047 aaKnown RBP17.49■□□□□ 0.39
ATP1A4-202ENST00000418334 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
ATP1A4-202ENST00000418334 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
ATP1A4-202ENST00000418334 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
ATP1A4-202ENST00000418334 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
ATP1A4-202ENST00000418334 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.36
ATP1A4-202ENST00000418334 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
ATP1A4-202ENST00000418334 WIZO95785 1651 aa17.31■□□□□ 0.36
ATP1A4-202ENST00000418334 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
ATP1A4-202ENST00000418334 EEA1Q15075 1411 aa17.25■□□□□ 0.35
ATP1A4-202ENST00000418334 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
ATP1A4-202ENST00000418334 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
ATP1A4-202ENST00000418334 NACADO15069 1562 aa17.19■□□□□ 0.34
ATP1A4-202ENST00000418334 GOLGA3Q08378 1498 aa17.16■□□□□ 0.34
ATP1A4-202ENST00000418334 SOGA1O94964 1423 aa17.14■□□□□ 0.33
ATP1A4-202ENST00000418334 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
ATP1A4-202ENST00000418334 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
ATP1A4-202ENST00000418334 DHX57Q6P158 1386 aaKnown RBP17.04■□□□□ 0.32
ATP1A4-202ENST00000418334 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
ATP1A4-202ENST00000418334 KIF21BO75037 1637 aa17.03■□□□□ 0.32
ATP1A4-202ENST00000418334 VPS8Q8N3P4 1428 aa17.02■□□□□ 0.32
ATP1A4-202ENST00000418334 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
ATP1A4-202ENST00000418334 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
ATP1A4-202ENST00000418334 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
ATP1A4-202ENST00000418334 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
ATP1A4-202ENST00000418334 CLIP1P30622 1438 aa16.97■□□□□ 0.31
ATP1A4-202ENST00000418334 PRKCSHP14314 528 aaPredicted RBP16.93■□□□□ 0.3
ATP1A4-202ENST00000418334 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
ATP1A4-202ENST00000418334 FKBP8Q14318 412 aa16.92■□□□□ 0.3
ATP1A4-202ENST00000418334 BCANQ96GW7 911 aa16.9■□□□□ 0.3
ATP1A4-202ENST00000418334 CUX2O14529 1486 aa16.89■□□□□ 0.29
ATP1A4-202ENST00000418334 MSH5O43196 834 aa16.88■□□□□ 0.29
ATP1A4-202ENST00000418334 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
ATP1A4-202ENST00000418334 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
ATP1A4-202ENST00000418334 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
ATP1A4-202ENST00000418334 APLP2Q06481 763 aa16.81■□□□□ 0.28
ATP1A4-202ENST00000418334 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
ATP1A4-202ENST00000418334 NEFLP07196 543 aa16.8■□□□□ 0.28
ATP1A4-202ENST00000418334 RRBP1Q9P2E9 1410 aaKnown RBP16.78■□□□□ 0.28
ATP1A4-202ENST00000418334 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
ATP1A4-202ENST00000418334 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
ATP1A4-202ENST00000418334 MAPKBP1O60336 1514 aa16.7■□□□□ 0.26
ATP1A4-202ENST00000418334 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
ATP1A4-202ENST00000418334 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
ATP1A4-202ENST00000418334 ITGAEP38570 1179 aa16.66■□□□□ 0.26
ATP1A4-202ENST00000418334 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
ATP1A4-202ENST00000418334 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
ATP1A4-202ENST00000418334 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
ATP1A4-202ENST00000418334 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
ATP1A4-202ENST00000418334 DEKP35659 375 aaKnown RBP16.6■□□□□ 0.25
ATP1A4-202ENST00000418334 CDK11AQ9UQ88 783 aaPredicted RBP16.59■□□□□ 0.25
ATP1A4-202ENST00000418334 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.25
ATP1A4-202ENST00000418334 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
ATP1A4-202ENST00000418334 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
ATP1A4-202ENST00000418334 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
ATP1A4-202ENST00000418334 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
ATP1A4-202ENST00000418334 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
ATP1A4-202ENST00000418334 ANP32CO43423 234 aa16.5■□□□□ 0.23
ATP1A4-202ENST00000418334 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms