RNA–Protein interactions for RNA: ENST00000413325.1

PPP1R9A-203, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 4

Gene PPP1R9A, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-203ENST00000413325 AEBP2Q6ZN18 517 aaPredicted RBP10.92□□□□□ -0.66
PPP1R9A-203ENST00000413325 CHIC1Q5VXU3 224 aa10.07□□□□□ -0.8
PPP1R9A-203ENST00000413325 POTEDQ86YR6 584 aa9.58□□□□□ -0.88
PPP1R9A-203ENST00000413325 SENP3Q9H4L4 574 aaPredicted RBP9.32□□□□□ -0.92
PPP1R9A-203ENST00000413325 PHF23Q9BUL5 403 aaPredicted RBP9.14□□□□□ -0.95
PPP1R9A-203ENST00000413325 FOXD1Q16676 465 aa8.85□□□□□ -0.99
PPP1R9A-203ENST00000413325 MSH5O43196 834 aa8.47□□□□□ -1.05
PPP1R9A-203ENST00000413325 PIAS4Q8N2W9 510 aaPredicted RBP8.06□□□□□ -1.12
PPP1R9A-203ENST00000413325 PLPPR3Q6T4P5 718 aa7.81□□□□□ -1.16
PPP1R9A-203ENST00000413325 PPP6R1Q9UPN7 881 aa7.75□□□□□ -1.17
PPP1R9A-203ENST00000413325 CACNB1Q02641 598 aaPredicted RBP7.74□□□□□ -1.17
PPP1R9A-203ENST00000413325 ADRA2BP18089 450 aa7.67□□□□□ -1.18
PPP1R9A-203ENST00000413325 DNAJC5Q9H3Z4 198 aa7.35□□□□□ -1.23
PPP1R9A-203ENST00000413325 POTEHQ6S545 545 aa7.34□□□□□ -1.23
PPP1R9A-203ENST00000413325 DNAJC5BQ9UF47 199 aa7.31□□□□□ -1.24
PPP1R9A-203ENST00000413325 DMRT2Q9Y5R5 561 aa7.3□□□□□ -1.24
PPP1R9A-203ENST00000413325 MAPK8IP2Q13387 824 aaPredicted RBP7.28□□□□□ -1.24
PPP1R9A-203ENST00000413325 RNF39Q9H2S5 420 aa7.21□□□□□ -1.26
PPP1R9A-203ENST00000413325 ABCC9O60706 1549 aa7.06□□□□□ -1.28
PPP1R9A-203ENST00000413325 SCAF1Q9H7N4 1312 aaKnown RBP7.04□□□□□ -1.28
PPP1R9A-203ENST00000413325 DCAF8L1A6NGE4 600 aa7.04□□□□□ -1.28
PPP1R9A-203ENST00000413325 C1QBPQ07021 282 aaKnown RBP7.02□□□□□ -1.29
PPP1R9A-203ENST00000413325 PPP4R3CPQ6ZMV5 832 aa6.78□□□□□ -1.32
PPP1R9A-203ENST00000413325 TRIM41Q8WV44 630 aa6.78□□□□□ -1.32
PPP1R9A-203ENST00000413325 HOXD11P31277 338 aaPredicted RBP6.75□□□□□ -1.33
PPP1R9A-203ENST00000413325 KCNA4P22459 653 aa6.73□□□□□ -1.33
PPP1R9A-203ENST00000413325 CNKSR2Q8WXI2 1034 aa6.7□□□□□ -1.34
PPP1R9A-203ENST00000413325 NCBP3Q53F19 620 aaKnown RBP6.66□□□□□ -1.34
PPP1R9A-203ENST00000413325 NISCHQ9Y2I1 1504 aa6.66□□□□□ -1.34
PPP1R9A-203ENST00000413325 RNF216Q9NWF9 866 aaPredicted RBP6.63□□□□□ -1.35
PPP1R9A-203ENST00000413325 EHMT2Q96KQ7 1210 aa6.55□□□□□ -1.36
PPP1R9A-203ENST00000413325 SP7Q8TDD2 431 aaPredicted RBP6.53□□□□□ -1.36
PPP1R9A-203ENST00000413325 DSG3P32926 999 aa6.52□□□□□ -1.37
PPP1R9A-203ENST00000413325 ILDR1Q86SU0 546 aaPredicted RBP6.51□□□□□ -1.37
PPP1R9A-203ENST00000413325 SLC4A1APQ9BWU0 796 aaKnown RBP6.5□□□□□ -1.37
PPP1R9A-203ENST00000413325 NPM3O75607 178 aaKnown RBP6.46□□□□□ -1.38
PPP1R9A-203ENST00000413325 PABPN1Q86U42 306 aaKnown RBP eCLIP6.44□□□□□ -1.38
PPP1R9A-203ENST00000413325 CECR2Q9BXF3 1484 aa6.44□□□□□ -1.38
PPP1R9A-203ENST00000413325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.41□□□□□ -1.38
PPP1R9A-203ENST00000413325 SPINK5Q9NQ38 1064 aaPredicted RBP6.4□□□□□ -1.38
PPP1R9A-203ENST00000413325 CUX2O14529 1486 aa6.4□□□□□ -1.39
PPP1R9A-203ENST00000413325 CHRDL2Q6WN34 429 aa6.37□□□□□ -1.39
PPP1R9A-203ENST00000413325 CAPN15O75808 1086 aa6.36□□□□□ -1.39
PPP1R9A-203ENST00000413325 PLSCR2Q9NRY7 297 aa6.36□□□□□ -1.39
PPP1R9A-203ENST00000413325 RB1CC1Q8TDY2 1594 aa6.34□□□□□ -1.39
PPP1R9A-203ENST00000413325 CC2D2AQ9P2K1 1620 aa6.32□□□□□ -1.4
PPP1R9A-203ENST00000413325 CSRNP3Q8WYN3 585 aa6.26□□□□□ -1.41
PPP1R9A-203ENST00000413325 U3KPZ7 1027 aaPredicted RBP6.25□□□□□ -1.41
PPP1R9A-203ENST00000413325 APLP2Q06481 763 aa6.22□□□□□ -1.41
PPP1R9A-203ENST00000413325 CCDC180Q9P1Z9 1646 aa6.21□□□□□ -1.41
PPP1R9A-203ENST00000413325 UNC13AQ9UPW8 1703 aa6.21□□□□□ -1.42
PPP1R9A-203ENST00000413325 TRHP20396 242 aaPredicted RBP6.2□□□□□ -1.42
PPP1R9A-203ENST00000413325 ERCC6Q03468 1493 aa6.2□□□□□ -1.42
PPP1R9A-203ENST00000413325 ABCB7O75027 752 aa6.19□□□□□ -1.42
PPP1R9A-203ENST00000413325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.18□□□□□ -1.42
PPP1R9A-203ENST00000413325 HNRNPUL2Q1KMD3 747 aaKnown RBP6.18□□□□□ -1.42
PPP1R9A-203ENST00000413325 FOXD4L1Q9NU39 408 aa6.18□□□□□ -1.42
PPP1R9A-203ENST00000413325 RBM42Q9BTD8 480 aaKnown RBP6.16□□□□□ -1.42
PPP1R9A-203ENST00000413325 HAX1O00165 279 aa6.14□□□□□ -1.43
PPP1R9A-203ENST00000413325 LMTK3Q96Q04 1460 aa6.14□□□□□ -1.43
PPP1R9A-203ENST00000413325 ZBTB22O15209 634 aa6.13□□□□□ -1.43
PPP1R9A-203ENST00000413325 BICRAQ9NZM4 1560 aa6.13□□□□□ -1.43
PPP1R9A-203ENST00000413325 LHX8Q68G74 356 aa6.12□□□□□ -1.43
PPP1R9A-203ENST00000413325 SOCS7O14512 581 aa6.11□□□□□ -1.43
PPP1R9A-203ENST00000413325 EVX2Q03828 476 aa6.1□□□□□ -1.43
PPP1R9A-203ENST00000413325 SAMD1Q6SPF0 538 aaPredicted RBP6.1□□□□□ -1.43
PPP1R9A-203ENST00000413325 PIP4P2Q8N4L2 257 aa6.09□□□□□ -1.43
PPP1R9A-203ENST00000413325 ZNF219Q9P2Y4 722 aaPredicted RBP6.09□□□□□ -1.43
PPP1R9A-203ENST00000413325 EIF4G1Q04637 1599 aaKnown RBP6.08□□□□□ -1.44
PPP1R9A-203ENST00000413325 SLC4A2P04920 1241 aa6.06□□□□□ -1.44
PPP1R9A-203ENST00000413325 NACADO15069 1562 aa6.06□□□□□ -1.44
PPP1R9A-203ENST00000413325 MYCNP04198 464 aaPredicted RBP6.02□□□□□ -1.45
PPP1R9A-203ENST00000413325 RIMBP3CA6NJZ7 1639 aa6.02□□□□□ -1.45
PPP1R9A-203ENST00000413325 RIMBP3BA6NNM3 1639 aa6.02□□□□□ -1.45
PPP1R9A-203ENST00000413325 RIMBP3Q9UFD9 1639 aa6.02□□□□□ -1.45
PPP1R9A-203ENST00000413325 OSCARQ8IYS5 282 aa5.99□□□□□ -1.45
PPP1R9A-203ENST00000413325 ILDR2Q71H61 639 aa5.98□□□□□ -1.45
PPP1R9A-203ENST00000413325 FBXO41Q8TF61 875 aa5.98□□□□□ -1.45
PPP1R9A-203ENST00000413325 DCAF8L2P0C7V8 631 aa5.97□□□□□ -1.45
PPP1R9A-203ENST00000413325 BAZ1AQ9NRL2 1556 aaPredicted RBP5.97□□□□□ -1.45
PPP1R9A-203ENST00000413325 SHROOM4Q9ULL8 1493 aa5.96□□□□□ -1.46
PPP1R9A-203ENST00000413325 ATXN8OSP0DMR3 200 aa5.93□□□□□ -1.46
PPP1R9A-203ENST00000413325 CYB5RLQ6IPT4 315 aa5.93□□□□□ -1.46
PPP1R9A-203ENST00000413325 DISP3Q9P2K9 1392 aa5.93□□□□□ -1.46
PPP1R9A-203ENST00000413325 FXR2P51116 673 aaKnown RBP eCLIP5.92□□□□□ -1.46
PPP1R9A-203ENST00000413325 THOC2Q8NI27 1593 aaKnown RBP5.9□□□□□ -1.46
PPP1R9A-203ENST00000413325 ARHGEF11O15085 1522 aa5.89□□□□□ -1.47
PPP1R9A-203ENST00000413325 ERCC6L2Q5T890 1561 aa5.89□□□□□ -1.47
PPP1R9A-203ENST00000413325 AKT1S1Q96B36 256 aa5.89□□□□□ -1.47
PPP1R9A-203ENST00000413325 REM2Q8IYK8 340 aaPredicted RBP5.88□□□□□ -1.47
PPP1R9A-203ENST00000413325 ZBTB12Q9Y330 459 aaPredicted RBP5.87□□□□□ -1.47
PPP1R9A-203ENST00000413325 GABBR2O75899 941 aa5.86□□□□□ -1.47
PPP1R9A-203ENST00000413325 PITPNM1O00562 1244 aa5.84□□□□□ -1.47
PPP1R9A-203ENST00000413325 SMARCA2P51531 1590 aa5.84□□□□□ -1.48
PPP1R9A-203ENST00000413325 POLA2Q14181 598 aa5.83□□□□□ -1.48
PPP1R9A-203ENST00000413325 POTEMA6NI47 508 aa5.81□□□□□ -1.48
PPP1R9A-203ENST00000413325 NESP48681 1621 aa5.81□□□□□ -1.48
PPP1R9A-203ENST00000413325 KDM4FA0A1W2PPD8 638 aa5.79□□□□□ -1.48
PPP1R9A-203ENST00000413325 HECW2Q9P2P5 1572 aa5.79□□□□□ -1.48
PPP1R9A-203ENST00000413325 POTEIP0CG38 1075 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms