RNA–Protein interactions for RNA: ENST00000389583.4

TMEM72-201, Transcript of transmembrane protein 72, humanhuman

APPRIS P1 TSL 1 (best)

Gene TMEM72, Length 3,009 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM72-201ENST00000389583 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
TMEM72-201ENST00000389583 HRCP23327 699 aa22.14■■□□□ 1.13
TMEM72-201ENST00000389583 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
TMEM72-201ENST00000389583 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
TMEM72-201ENST00000389583 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
TMEM72-201ENST00000389583 SHROOM4Q9ULL8 1493 aa21.73■■□□□ 1.07
TMEM72-201ENST00000389583 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
TMEM72-201ENST00000389583 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
TMEM72-201ENST00000389583 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
TMEM72-201ENST00000389583 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
TMEM72-201ENST00000389583 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
TMEM72-201ENST00000389583 ABCC9O60706 1549 aa21■□□□□ 0.95
TMEM72-201ENST00000389583 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
TMEM72-201ENST00000389583 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
TMEM72-201ENST00000389583 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
TMEM72-201ENST00000389583 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
TMEM72-201ENST00000389583 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
TMEM72-201ENST00000389583 MYT1Q01538 1121 aa20.7■□□□□ 0.9
TMEM72-201ENST00000389583 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
TMEM72-201ENST00000389583 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
TMEM72-201ENST00000389583 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
TMEM72-201ENST00000389583 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
TMEM72-201ENST00000389583 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
TMEM72-201ENST00000389583 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
TMEM72-201ENST00000389583 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
TMEM72-201ENST00000389583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
TMEM72-201ENST00000389583 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
TMEM72-201ENST00000389583 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
TMEM72-201ENST00000389583 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
TMEM72-201ENST00000389583 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.79
TMEM72-201ENST00000389583 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
TMEM72-201ENST00000389583 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
TMEM72-201ENST00000389583 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
TMEM72-201ENST00000389583 NACADO15069 1562 aa19.78■□□□□ 0.76
TMEM72-201ENST00000389583 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
TMEM72-201ENST00000389583 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
TMEM72-201ENST00000389583 MIER1Q8N108 512 aa19.61■□□□□ 0.73
TMEM72-201ENST00000389583 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
TMEM72-201ENST00000389583 ANP32EQ9BTT0 268 aa19.4■□□□□ 0.7
TMEM72-201ENST00000389583 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
TMEM72-201ENST00000389583 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
TMEM72-201ENST00000389583 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
TMEM72-201ENST00000389583 TSHZ2Q9NRE2 1034 aa19.29■□□□□ 0.68
TMEM72-201ENST00000389583 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.67
TMEM72-201ENST00000389583 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
TMEM72-201ENST00000389583 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
TMEM72-201ENST00000389583 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
TMEM72-201ENST00000389583 BCANQ96GW7 911 aa19.13■□□□□ 0.65
TMEM72-201ENST00000389583 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
TMEM72-201ENST00000389583 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
TMEM72-201ENST00000389583 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
TMEM72-201ENST00000389583 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
TMEM72-201ENST00000389583 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
TMEM72-201ENST00000389583 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
TMEM72-201ENST00000389583 FKBP8Q14318 412 aa18.9■□□□□ 0.62
TMEM72-201ENST00000389583 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
TMEM72-201ENST00000389583 WIZO95785 1651 aa18.85■□□□□ 0.61
TMEM72-201ENST00000389583 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
TMEM72-201ENST00000389583 BAZ1AQ9NRL2 1556 aaPredicted RBP18.83■□□□□ 0.61
TMEM72-201ENST00000389583 TNIKQ9UKE5 1360 aa18.82■□□□□ 0.6
TMEM72-201ENST00000389583 ITGAEP38570 1179 aa18.8■□□□□ 0.6
TMEM72-201ENST00000389583 APLP2Q06481 763 aa18.79■□□□□ 0.6
TMEM72-201ENST00000389583 RANGAP1P46060 587 aaPredicted RBP18.78■□□□□ 0.6
TMEM72-201ENST00000389583 SOGA1O94964 1423 aa18.77■□□□□ 0.59
TMEM72-201ENST00000389583 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
TMEM72-201ENST00000389583 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
TMEM72-201ENST00000389583 NEFLP07196 543 aa18.75■□□□□ 0.59
TMEM72-201ENST00000389583 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
TMEM72-201ENST00000389583 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
TMEM72-201ENST00000389583 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
TMEM72-201ENST00000389583 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
TMEM72-201ENST00000389583 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
TMEM72-201ENST00000389583 MSH5O43196 834 aa18.66■□□□□ 0.58
TMEM72-201ENST00000389583 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
TMEM72-201ENST00000389583 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
TMEM72-201ENST00000389583 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
TMEM72-201ENST00000389583 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.56
TMEM72-201ENST00000389583 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
TMEM72-201ENST00000389583 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
TMEM72-201ENST00000389583 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
TMEM72-201ENST00000389583 CLIP1P30622 1438 aa18.51■□□□□ 0.55
TMEM72-201ENST00000389583 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
TMEM72-201ENST00000389583 EEA1Q15075 1411 aa18.46■□□□□ 0.55
TMEM72-201ENST00000389583 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
TMEM72-201ENST00000389583 DEKP35659 375 aaKnown RBP18.45■□□□□ 0.54
TMEM72-201ENST00000389583 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
TMEM72-201ENST00000389583 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
TMEM72-201ENST00000389583 HIRIP3Q9BW71 556 aaPredicted RBP18.42■□□□□ 0.54
TMEM72-201ENST00000389583 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
TMEM72-201ENST00000389583 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
TMEM72-201ENST00000389583 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
TMEM72-201ENST00000389583 ANO8Q9HCE9 1232 aaPredicted RBP18.36■□□□□ 0.53
TMEM72-201ENST00000389583 NBR1Q14596 966 aa18.34■□□□□ 0.53
TMEM72-201ENST00000389583 ANP32CO43423 234 aa18.33■□□□□ 0.52
TMEM72-201ENST00000389583 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
TMEM72-201ENST00000389583 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
TMEM72-201ENST00000389583 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
TMEM72-201ENST00000389583 NESP48681 1621 aa18.28■□□□□ 0.52
TMEM72-201ENST00000389583 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
TMEM72-201ENST00000389583 HNRNPUQ00839 825 aaKnown RBP eCLIP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms