RNA–Protein interactions for RNA: ENST00000371284.9

TTC4-202, Transcript of tetratricopeptide repeat domain 4, humanhuman

TSL 5

Gene TTC4, Length 2,124 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4-202ENST00000371284 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
TTC4-202ENST00000371284 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
TTC4-202ENST00000371284 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
TTC4-202ENST00000371284 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
TTC4-202ENST00000371284 SUPT5HO00267 1087 aaKnown RBP28■■■□□ 2.07
TTC4-202ENST00000371284 DCAF1Q9Y4B6 1507 aa27.58■■■□□ 2.01
TTC4-202ENST00000371284 MYO15BQ96JP2 1530 aa27.47■■□□□ 1.99
TTC4-202ENST00000371284 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
TTC4-202ENST00000371284 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
TTC4-202ENST00000371284 HRCP23327 699 aa27.04■■□□□ 1.92
TTC4-202ENST00000371284 ABCC9O60706 1549 aa26.87■■□□□ 1.89
TTC4-202ENST00000371284 PCGF6Q9BYE7 350 aa26.74■■□□□ 1.87
TTC4-202ENST00000371284 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
TTC4-202ENST00000371284 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
TTC4-202ENST00000371284 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
TTC4-202ENST00000371284 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
TTC4-202ENST00000371284 PPARGC1BQ86YN6 1023 aaKnown RBP26.31■■□□□ 1.8
TTC4-202ENST00000371284 TRIM26Q12899 539 aaPredicted RBP26.29■■□□□ 1.8
TTC4-202ENST00000371284 NACADO15069 1562 aa26.21■■□□□ 1.79
TTC4-202ENST00000371284 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
TTC4-202ENST00000371284 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
TTC4-202ENST00000371284 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
TTC4-202ENST00000371284 WIZO95785 1651 aa25.9■■□□□ 1.74
TTC4-202ENST00000371284 ZEB1P37275 1124 aaPredicted RBP25.86■■□□□ 1.73
TTC4-202ENST00000371284 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
TTC4-202ENST00000371284 FAM9AQ8IZU1 332 aaPredicted RBP25.82■■□□□ 1.72
TTC4-202ENST00000371284 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
TTC4-202ENST00000371284 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
TTC4-202ENST00000371284 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
TTC4-202ENST00000371284 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
TTC4-202ENST00000371284 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
TTC4-202ENST00000371284 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
TTC4-202ENST00000371284 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
TTC4-202ENST00000371284 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
TTC4-202ENST00000371284 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.64
TTC4-202ENST00000371284 EEA1Q15075 1411 aa25.16■■□□□ 1.62
TTC4-202ENST00000371284 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
TTC4-202ENST00000371284 TNIKQ9UKE5 1360 aa25.14■■□□□ 1.61
TTC4-202ENST00000371284 SOGA1O94964 1423 aa25.12■■□□□ 1.61
TTC4-202ENST00000371284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.1■■□□□ 1.61
TTC4-202ENST00000371284 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
TTC4-202ENST00000371284 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
TTC4-202ENST00000371284 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
TTC4-202ENST00000371284 SCAF1Q9H7N4 1312 aaKnown RBP25.01■■□□□ 1.59
TTC4-202ENST00000371284 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
TTC4-202ENST00000371284 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
TTC4-202ENST00000371284 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
TTC4-202ENST00000371284 KIF21BO75037 1637 aa24.85■■□□□ 1.57
TTC4-202ENST00000371284 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
TTC4-202ENST00000371284 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
TTC4-202ENST00000371284 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
TTC4-202ENST00000371284 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
TTC4-202ENST00000371284 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
TTC4-202ENST00000371284 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
TTC4-202ENST00000371284 DIEXFQ68CQ4 756 aaKnown RBP24.73■■□□□ 1.55
TTC4-202ENST00000371284 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
TTC4-202ENST00000371284 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
TTC4-202ENST00000371284 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
TTC4-202ENST00000371284 CLIP1P30622 1438 aa24.63■■□□□ 1.53
TTC4-202ENST00000371284 NEUROD1Q13562 356 aa24.63■■□□□ 1.53
TTC4-202ENST00000371284 VPS8Q8N3P4 1428 aa24.59■■□□□ 1.53
TTC4-202ENST00000371284 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
TTC4-202ENST00000371284 ZNF316A6NFI3 1004 aaPredicted RBP24.53■■□□□ 1.52
TTC4-202ENST00000371284 CENPBP07199 599 aaPredicted RBP24.53■■□□□ 1.52
TTC4-202ENST00000371284 RAPGEF2Q9Y4G8 1499 aa24.53■■□□□ 1.52
TTC4-202ENST00000371284 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
TTC4-202ENST00000371284 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
TTC4-202ENST00000371284 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.49
TTC4-202ENST00000371284 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
TTC4-202ENST00000371284 APLP2Q06481 763 aa24.33■■□□□ 1.49
TTC4-202ENST00000371284 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
TTC4-202ENST00000371284 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
TTC4-202ENST00000371284 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
TTC4-202ENST00000371284 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
TTC4-202ENST00000371284 CUX1P39880 1505 aa24.21■■□□□ 1.47
TTC4-202ENST00000371284 CLSPNQ9HAW4 1339 aa24.17■■□□□ 1.46
TTC4-202ENST00000371284 MIER1Q8N108 512 aa24.17■■□□□ 1.46
TTC4-202ENST00000371284 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.45
TTC4-202ENST00000371284 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
TTC4-202ENST00000371284 DHX57Q6P158 1386 aaKnown RBP24.11■■□□□ 1.45
TTC4-202ENST00000371284 RRBP1Q9P2E9 1410 aaKnown RBP24.09■■□□□ 1.45
TTC4-202ENST00000371284 CFTRP13569 1480 aa24.08■■□□□ 1.45
TTC4-202ENST00000371284 PRDM2Q13029 1718 aa24.08■■□□□ 1.44
TTC4-202ENST00000371284 YTHDC1Q96MU7 727 aaKnown RBP24.05■■□□□ 1.44
TTC4-202ENST00000371284 CUX2O14529 1486 aa24.04■■□□□ 1.44
TTC4-202ENST00000371284 KANK4Q5T7N3 995 aaPredicted RBP24.04■■□□□ 1.44
TTC4-202ENST00000371284 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
TTC4-202ENST00000371284 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
TTC4-202ENST00000371284 MAP3K1Q13233 1512 aa23.88■■□□□ 1.41
TTC4-202ENST00000371284 TIAM1Q13009 1591 aa23.83■■□□□ 1.41
TTC4-202ENST00000371284 IGF1RP08069 1367 aa23.81■■□□□ 1.4
TTC4-202ENST00000371284 MAPKBP1O60336 1514 aa23.72■■□□□ 1.39
TTC4-202ENST00000371284 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
TTC4-202ENST00000371284 CFAP43Q8NDM7 1665 aa23.71■■□□□ 1.39
TTC4-202ENST00000371284 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
TTC4-202ENST00000371284 CARMIL1Q5VZK9 1371 aa23.7■■□□□ 1.38
TTC4-202ENST00000371284 RAB3GAP2Q9H2M9 1393 aa23.7■■□□□ 1.38
TTC4-202ENST00000371284 LRRC9Q6ZRR7 1453 aa23.69■■□□□ 1.38
TTC4-202ENST00000371284 MYT1Q01538 1121 aa23.65■■□□□ 1.38
TTC4-202ENST00000371284 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms