RNA–Protein interactions for RNA: ENST00000370276.5

CCDC18-202, Transcript of coiled-coil domain containing 18, humanhuman

TSL 5

Gene CCDC18, Length 4,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-202ENST00000370276 NISCHQ9Y2I1 1504 aa9.64□□□□□ -0.87
CCDC18-202ENST00000370276 SHROOM4Q9ULL8 1493 aa9.23□□□□□ -0.93
CCDC18-202ENST00000370276 AEBP2Q6ZN18 517 aaPredicted RBP9.2□□□□□ -0.94
CCDC18-202ENST00000370276 SUPT5HO00267 1087 aaKnown RBP9.16□□□□□ -0.94
CCDC18-202ENST00000370276 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
CCDC18-202ENST00000370276 PCGF6Q9BYE7 350 aa8.92□□□□□ -0.98
CCDC18-202ENST00000370276 DCAF8L2P0C7V8 631 aa8.92□□□□□ -0.98
CCDC18-202ENST00000370276 EHMT2Q96KQ7 1210 aa8.84□□□□□ -0.99
CCDC18-202ENST00000370276 CHIC1Q5VXU3 224 aa8.8□□□□□ -1
CCDC18-202ENST00000370276 LOC105371045A0A1W2PR82 267 aa8.77□□□□□ -1.01
CCDC18-202ENST00000370276 HRCP23327 699 aa8.72□□□□□ -1.01
CCDC18-202ENST00000370276 MYO15BQ96JP2 1530 aa8.71□□□□□ -1.02
CCDC18-202ENST00000370276 FAM9AQ8IZU1 332 aaPredicted RBP8.59□□□□□ -1.03
CCDC18-202ENST00000370276 TTBK1Q5TCY1 1321 aaPredicted RBP8.52□□□□□ -1.05
CCDC18-202ENST00000370276 CCDC180Q9P1Z9 1646 aa8.4□□□□□ -1.06
CCDC18-202ENST00000370276 SCAF1Q9H7N4 1312 aaKnown RBP8.38□□□□□ -1.07
CCDC18-202ENST00000370276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.32□□□□□ -1.08
CCDC18-202ENST00000370276 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
CCDC18-202ENST00000370276 YTHDC1Q96MU7 727 aaKnown RBP8.23□□□□□ -1.09
CCDC18-202ENST00000370276 NEUROD1Q13562 356 aa8.22□□□□□ -1.09
CCDC18-202ENST00000370276 TRIM41Q8WV44 630 aa8.22□□□□□ -1.09
CCDC18-202ENST00000370276 GTF3C3Q9Y5Q9 886 aa8.16□□□□□ -1.1
CCDC18-202ENST00000370276 CCER1Q8TC90 406 aaPredicted RBP8.15□□□□□ -1.1
CCDC18-202ENST00000370276 RANGAP1P46060 587 aaPredicted RBP8.14□□□□□ -1.11
CCDC18-202ENST00000370276 ZCCHC6Q5VYS8 1495 aaKnown RBP8.11□□□□□ -1.11
CCDC18-202ENST00000370276 DCAF1Q9Y4B6 1507 aa8.06□□□□□ -1.12
CCDC18-202ENST00000370276 DIEXFQ68CQ4 756 aaKnown RBP8.05□□□□□ -1.12
CCDC18-202ENST00000370276 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
CCDC18-202ENST00000370276 HNRNPUL2Q1KMD3 747 aaKnown RBP8.01□□□□□ -1.13
CCDC18-202ENST00000370276 ABCC9O60706 1549 aa8□□□□□ -1.13
CCDC18-202ENST00000370276 ZEB1P37275 1124 aaPredicted RBP7.95□□□□□ -1.14
CCDC18-202ENST00000370276 MIER1Q8N108 512 aa7.95□□□□□ -1.14
CCDC18-202ENST00000370276 PHF23Q9BUL5 403 aaPredicted RBP7.93□□□□□ -1.14
CCDC18-202ENST00000370276 SENP3Q9H4L4 574 aaPredicted RBP7.92□□□□□ -1.14
CCDC18-202ENST00000370276 UBTFP17480 764 aaKnown RBP7.91□□□□□ -1.14
CCDC18-202ENST00000370276 PELP1Q8IZL8 1130 aaKnown RBP7.9□□□□□ -1.15
CCDC18-202ENST00000370276 RSF1Q96T23 1441 aaPredicted RBP7.89□□□□□ -1.15
CCDC18-202ENST00000370276 RB1CC1Q8TDY2 1594 aa7.89□□□□□ -1.15
CCDC18-202ENST00000370276 UNC13AQ9UPW8 1703 aa7.87□□□□□ -1.15
CCDC18-202ENST00000370276 BCANQ96GW7 911 aa7.86□□□□□ -1.15
CCDC18-202ENST00000370276 CENPBP07199 599 aaPredicted RBP7.86□□□□□ -1.15
CCDC18-202ENST00000370276 CECR2Q9BXF3 1484 aa7.86□□□□□ -1.15
CCDC18-202ENST00000370276 SCRIBQ14160 1630 aa7.85□□□□□ -1.15
CCDC18-202ENST00000370276 KCNH8Q96L42 1107 aa7.84□□□□□ -1.15
CCDC18-202ENST00000370276 ITGAEP38570 1179 aa7.84□□□□□ -1.15
CCDC18-202ENST00000370276 NACADO15069 1562 aa7.83□□□□□ -1.16
CCDC18-202ENST00000370276 HIRIP3Q9BW71 556 aaPredicted RBP7.8□□□□□ -1.16
CCDC18-202ENST00000370276 ZNF316A6NFI3 1004 aaPredicted RBP7.79□□□□□ -1.16
CCDC18-202ENST00000370276 RUSC2Q8N2Y8 1516 aa7.77□□□□□ -1.17
CCDC18-202ENST00000370276 SOGA1O94964 1423 aa7.76□□□□□ -1.17
CCDC18-202ENST00000370276 BICRAQ9NZM4 1560 aa7.75□□□□□ -1.17
CCDC18-202ENST00000370276 PABPN1Q86U42 306 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC18-202ENST00000370276 ABCC8Q09428 1581 aa7.74□□□□□ -1.17
CCDC18-202ENST00000370276 CCDC88BA6NC98 1476 aa7.73□□□□□ -1.17
CCDC18-202ENST00000370276 SENP3-EIF4A1A0A087X0R7 540 aa7.71□□□□□ -1.17
CCDC18-202ENST00000370276 MROH2BQ7Z745 1585 aa7.71□□□□□ -1.18
CCDC18-202ENST00000370276 CNGB1Q14028 1251 aaPredicted RBP7.68□□□□□ -1.18
CCDC18-202ENST00000370276 CEP162Q5TB80 1403 aa7.68□□□□□ -1.18
CCDC18-202ENST00000370276 CSRNP3Q8WYN3 585 aa7.67□□□□□ -1.18
CCDC18-202ENST00000370276 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
CCDC18-202ENST00000370276 WIZO95785 1651 aa7.66□□□□□ -1.18
CCDC18-202ENST00000370276 TRIM52Q96A61 297 aa7.66□□□□□ -1.18
CCDC18-202ENST00000370276 DNAJC5BQ9UF47 199 aa7.66□□□□□ -1.18
CCDC18-202ENST00000370276 IRX6P78412 446 aaPredicted RBP7.65□□□□□ -1.18
CCDC18-202ENST00000370276 TSHZ2Q9NRE2 1034 aa7.62□□□□□ -1.19
CCDC18-202ENST00000370276 KANK4Q5T7N3 995 aaPredicted RBP7.62□□□□□ -1.19
CCDC18-202ENST00000370276 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
CCDC18-202ENST00000370276 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
CCDC18-202ENST00000370276 APLP2Q06481 763 aa7.61□□□□□ -1.19
CCDC18-202ENST00000370276 FKBP8Q14318 412 aa7.6□□□□□ -1.19
CCDC18-202ENST00000370276 SIN3AQ96ST3 1273 aa7.59□□□□□ -1.2
CCDC18-202ENST00000370276 P3H3Q8IVL6 736 aa7.58□□□□□ -1.2
CCDC18-202ENST00000370276 BCL11AQ9H165 835 aa7.53□□□□□ -1.2
CCDC18-202ENST00000370276 CLIP1P30622 1438 aa7.49□□□□□ -1.21
CCDC18-202ENST00000370276 TNIKQ9UKE5 1360 aa7.48□□□□□ -1.21
CCDC18-202ENST00000370276 FAM50AQ14320 339 aaKnown RBP7.48□□□□□ -1.21
CCDC18-202ENST00000370276 ANP32EQ9BTT0 268 aa7.47□□□□□ -1.21
CCDC18-202ENST00000370276 BAZ1BQ9UIG0 1483 aaKnown RBP7.47□□□□□ -1.21
CCDC18-202ENST00000370276 ARID3CA6NKF2 412 aa7.47□□□□□ -1.21
CCDC18-202ENST00000370276 RAPGEF2Q9Y4G8 1499 aa7.46□□□□□ -1.21
CCDC18-202ENST00000370276 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.22
CCDC18-202ENST00000370276 DHX57Q6P158 1386 aaKnown RBP7.46□□□□□ -1.22
CCDC18-202ENST00000370276 MSH5O43196 834 aa7.46□□□□□ -1.22
CCDC18-202ENST00000370276 CC2D2AQ9P2K1 1620 aa7.45□□□□□ -1.22
CCDC18-202ENST00000370276 EIF4G1Q04637 1599 aaKnown RBP7.44□□□□□ -1.22
CCDC18-202ENST00000370276 WRNQ14191 1432 aaPredicted RBP eCLIP7.43□□□□□ -1.22
CCDC18-202ENST00000370276 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
CCDC18-202ENST00000370276 POLR3GLQ9BT43 218 aa7.4□□□□□ -1.22
CCDC18-202ENST00000370276 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCDC18-202ENST00000370276 NBR1Q14596 966 aa7.39□□□□□ -1.23
CCDC18-202ENST00000370276 GOLGA3Q08378 1498 aa7.38□□□□□ -1.23
CCDC18-202ENST00000370276 B4GALNT3Q6L9W6 998 aa7.38□□□□□ -1.23
CCDC18-202ENST00000370276 FOXD1Q16676 465 aa7.38□□□□□ -1.23
CCDC18-202ENST00000370276 MYT1Q01538 1121 aa7.37□□□□□ -1.23
CCDC18-202ENST00000370276 VPS8Q8N3P4 1428 aa7.36□□□□□ -1.23
CCDC18-202ENST00000370276 FAM9BQ8IZU0 186 aa7.36□□□□□ -1.23
CCDC18-202ENST00000370276 CHIC2Q9UKJ5 165 aa7.36□□□□□ -1.23
CCDC18-202ENST00000370276 NEFLP07196 543 aa7.36□□□□□ -1.23
CCDC18-202ENST00000370276 SALL2Q9Y467 1007 aaPredicted RBP7.35□□□□□ -1.23
CCDC18-202ENST00000370276 RAB3GAP2Q9H2M9 1393 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms