RNA–Protein interactions for RNA: ENST00000356146.5

CDKL1-202, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best)

Gene CDKL1, Length 2,982 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-202ENST00000356146 NISCHQ9Y2I1 1504 aa27.92■■■□□ 2.06
CDKL1-202ENST00000356146 CCDC180Q9P1Z9 1646 aa23.76■■□□□ 1.39
CDKL1-202ENST00000356146 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
CDKL1-202ENST00000356146 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
CDKL1-202ENST00000356146 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
CDKL1-202ENST00000356146 DCAF1Q9Y4B6 1507 aa23.09■■□□□ 1.29
CDKL1-202ENST00000356146 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
CDKL1-202ENST00000356146 MYO15BQ96JP2 1530 aa22.94■■□□□ 1.26
CDKL1-202ENST00000356146 HRCP23327 699 aa22.74■■□□□ 1.23
CDKL1-202ENST00000356146 DCAF8L2P0C7V8 631 aa22.58■■□□□ 1.2
CDKL1-202ENST00000356146 ABCC9O60706 1549 aa22.44■■□□□ 1.18
CDKL1-202ENST00000356146 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
CDKL1-202ENST00000356146 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
CDKL1-202ENST00000356146 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
CDKL1-202ENST00000356146 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
CDKL1-202ENST00000356146 SCRIBQ14160 1630 aa22.04■■□□□ 1.12
CDKL1-202ENST00000356146 RB1CC1Q8TDY2 1594 aa22.03■■□□□ 1.12
CDKL1-202ENST00000356146 PPARGC1BQ86YN6 1023 aaKnown RBP21.98■■□□□ 1.11
CDKL1-202ENST00000356146 NACADO15069 1562 aa21.84■■□□□ 1.09
CDKL1-202ENST00000356146 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
CDKL1-202ENST00000356146 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
CDKL1-202ENST00000356146 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
CDKL1-202ENST00000356146 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
CDKL1-202ENST00000356146 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
CDKL1-202ENST00000356146 EIF4G1Q04637 1599 aaKnown RBP21.54■■□□□ 1.04
CDKL1-202ENST00000356146 WIZO95785 1651 aa21.52■■□□□ 1.04
CDKL1-202ENST00000356146 FAM9AQ8IZU1 332 aaPredicted RBP21.42■■□□□ 1.02
CDKL1-202ENST00000356146 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
CDKL1-202ENST00000356146 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
CDKL1-202ENST00000356146 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
CDKL1-202ENST00000356146 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
CDKL1-202ENST00000356146 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
CDKL1-202ENST00000356146 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
CDKL1-202ENST00000356146 EEA1Q15075 1411 aa21.11■□□□□ 0.97
CDKL1-202ENST00000356146 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
CDKL1-202ENST00000356146 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
CDKL1-202ENST00000356146 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
CDKL1-202ENST00000356146 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
CDKL1-202ENST00000356146 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
CDKL1-202ENST00000356146 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.96
CDKL1-202ENST00000356146 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
CDKL1-202ENST00000356146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
CDKL1-202ENST00000356146 SOGA1O94964 1423 aa20.92■□□□□ 0.94
CDKL1-202ENST00000356146 PEG3Q9GZU2 1588 aa20.92■□□□□ 0.94
CDKL1-202ENST00000356146 GOLGA3Q08378 1498 aa20.87■□□□□ 0.93
CDKL1-202ENST00000356146 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
CDKL1-202ENST00000356146 ACIN1Q9UKV3 1341 aaKnown RBP20.81■□□□□ 0.92
CDKL1-202ENST00000356146 KIF21BO75037 1637 aa20.79■□□□□ 0.92
CDKL1-202ENST00000356146 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
CDKL1-202ENST00000356146 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
CDKL1-202ENST00000356146 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
CDKL1-202ENST00000356146 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
CDKL1-202ENST00000356146 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
CDKL1-202ENST00000356146 CENPBP07199 599 aaPredicted RBP20.67■□□□□ 0.9
CDKL1-202ENST00000356146 NEUROD1Q13562 356 aa20.67■□□□□ 0.9
CDKL1-202ENST00000356146 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
CDKL1-202ENST00000356146 UBTFP17480 764 aaKnown RBP20.66■□□□□ 0.9
CDKL1-202ENST00000356146 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
CDKL1-202ENST00000356146 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.89
CDKL1-202ENST00000356146 CLIP1P30622 1438 aa20.57■□□□□ 0.88
CDKL1-202ENST00000356146 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
CDKL1-202ENST00000356146 TTBK1Q5TCY1 1321 aaPredicted RBP20.51■□□□□ 0.87
CDKL1-202ENST00000356146 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
CDKL1-202ENST00000356146 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
CDKL1-202ENST00000356146 RAPGEF2Q9Y4G8 1499 aa20.45■□□□□ 0.86
CDKL1-202ENST00000356146 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
CDKL1-202ENST00000356146 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
CDKL1-202ENST00000356146 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
CDKL1-202ENST00000356146 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
CDKL1-202ENST00000356146 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
CDKL1-202ENST00000356146 APLP2Q06481 763 aa20.31■□□□□ 0.84
CDKL1-202ENST00000356146 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
CDKL1-202ENST00000356146 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
CDKL1-202ENST00000356146 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
CDKL1-202ENST00000356146 MIER1Q8N108 512 aa20.23■□□□□ 0.83
CDKL1-202ENST00000356146 MYT1Q01538 1121 aa20.22■□□□□ 0.83
CDKL1-202ENST00000356146 CUX2O14529 1486 aa20.2■□□□□ 0.82
CDKL1-202ENST00000356146 RRBP1Q9P2E9 1410 aaKnown RBP20.2■□□□□ 0.82
CDKL1-202ENST00000356146 DHX57Q6P158 1386 aaKnown RBP20.19■□□□□ 0.82
CDKL1-202ENST00000356146 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
CDKL1-202ENST00000356146 CUX1P39880 1505 aa20.15■□□□□ 0.82
CDKL1-202ENST00000356146 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
CDKL1-202ENST00000356146 YTHDC1Q96MU7 727 aaKnown RBP20.08■□□□□ 0.8
CDKL1-202ENST00000356146 CFTRP13569 1480 aa20.07■□□□□ 0.8
CDKL1-202ENST00000356146 MAP3K1Q13233 1512 aa20.04■□□□□ 0.8
CDKL1-202ENST00000356146 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
CDKL1-202ENST00000356146 ARHGAP35Q9NRY4 1499 aa20.03■□□□□ 0.8
CDKL1-202ENST00000356146 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
CDKL1-202ENST00000356146 CCNB3Q8WWL7 1395 aa20■□□□□ 0.79
CDKL1-202ENST00000356146 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
CDKL1-202ENST00000356146 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
CDKL1-202ENST00000356146 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
CDKL1-202ENST00000356146 IGF1RP08069 1367 aa19.85■□□□□ 0.77
CDKL1-202ENST00000356146 CFAP43Q8NDM7 1665 aa19.81■□□□□ 0.76
CDKL1-202ENST00000356146 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
CDKL1-202ENST00000356146 LRRC9Q6ZRR7 1453 aa19.8■□□□□ 0.76
CDKL1-202ENST00000356146 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
CDKL1-202ENST00000356146 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.75
CDKL1-202ENST00000356146 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
CDKL1-202ENST00000356146 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms