RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
SNX21-202ENST00000344780 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
SNX21-202ENST00000344780 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
SNX21-202ENST00000344780 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
SNX21-202ENST00000344780 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
SNX21-202ENST00000344780 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
SNX21-202ENST00000344780 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
SNX21-202ENST00000344780 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
SNX21-202ENST00000344780 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
SNX21-202ENST00000344780 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
SNX21-202ENST00000344780 LOC105371045A0A1W2PR82 267 aa21.88■■□□□ 1.09
SNX21-202ENST00000344780 EHMT2Q96KQ7 1210 aa21.8■■□□□ 1.08
SNX21-202ENST00000344780 HRCP23327 699 aa21.76■■□□□ 1.07
SNX21-202ENST00000344780 ABCC9O60706 1549 aa21.73■■□□□ 1.07
SNX21-202ENST00000344780 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
SNX21-202ENST00000344780 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
SNX21-202ENST00000344780 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.06
SNX21-202ENST00000344780 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
SNX21-202ENST00000344780 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
SNX21-202ENST00000344780 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
SNX21-202ENST00000344780 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
SNX21-202ENST00000344780 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
SNX21-202ENST00000344780 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
SNX21-202ENST00000344780 PABPN1Q86U42 306 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNX21-202ENST00000344780 MROH2BQ7Z745 1585 aa21.05■□□□□ 0.96
SNX21-202ENST00000344780 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
SNX21-202ENST00000344780 TTBK1Q5TCY1 1321 aaPredicted RBP20.99■□□□□ 0.95
SNX21-202ENST00000344780 NACADO15069 1562 aa20.99■□□□□ 0.95
SNX21-202ENST00000344780 WIZO95785 1651 aa20.93■□□□□ 0.94
SNX21-202ENST00000344780 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
SNX21-202ENST00000344780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.9
SNX21-202ENST00000344780 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
SNX21-202ENST00000344780 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
SNX21-202ENST00000344780 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.89
SNX21-202ENST00000344780 CCER1Q8TC90 406 aaPredicted RBP20.58■□□□□ 0.88
SNX21-202ENST00000344780 UBTFP17480 764 aaKnown RBP20.57■□□□□ 0.88
SNX21-202ENST00000344780 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
SNX21-202ENST00000344780 SOGA1O94964 1423 aa20.45■□□□□ 0.86
SNX21-202ENST00000344780 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
SNX21-202ENST00000344780 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
SNX21-202ENST00000344780 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
SNX21-202ENST00000344780 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
SNX21-202ENST00000344780 MYT1Q01538 1121 aa20.36■□□□□ 0.85
SNX21-202ENST00000344780 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
SNX21-202ENST00000344780 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
SNX21-202ENST00000344780 SMARCA2P51531 1590 aa20.33■□□□□ 0.85
SNX21-202ENST00000344780 NEUROD1Q13562 356 aa20.33■□□□□ 0.84
SNX21-202ENST00000344780 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
SNX21-202ENST00000344780 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
SNX21-202ENST00000344780 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
SNX21-202ENST00000344780 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
SNX21-202ENST00000344780 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
SNX21-202ENST00000344780 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
SNX21-202ENST00000344780 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
SNX21-202ENST00000344780 YTHDC1Q96MU7 727 aaKnown RBP20.08■□□□□ 0.81
SNX21-202ENST00000344780 BAZ1BQ9UIG0 1483 aaKnown RBP20.07■□□□□ 0.8
SNX21-202ENST00000344780 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
SNX21-202ENST00000344780 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
SNX21-202ENST00000344780 APLP2Q06481 763 aa20.03■□□□□ 0.8
SNX21-202ENST00000344780 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
SNX21-202ENST00000344780 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
SNX21-202ENST00000344780 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
SNX21-202ENST00000344780 EEA1Q15075 1411 aa19.9■□□□□ 0.78
SNX21-202ENST00000344780 CLIP1P30622 1438 aa19.88■□□□□ 0.77
SNX21-202ENST00000344780 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
SNX21-202ENST00000344780 ZNF316A6NFI3 1004 aaPredicted RBP19.86■□□□□ 0.77
SNX21-202ENST00000344780 ITGAEP38570 1179 aa19.81■□□□□ 0.76
SNX21-202ENST00000344780 BCL11AQ9H165 835 aa19.81■□□□□ 0.76
SNX21-202ENST00000344780 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
SNX21-202ENST00000344780 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
SNX21-202ENST00000344780 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
SNX21-202ENST00000344780 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
SNX21-202ENST00000344780 MIER1Q8N108 512 aa19.7■□□□□ 0.74
SNX21-202ENST00000344780 P3H3Q8IVL6 736 aa19.68■□□□□ 0.74
SNX21-202ENST00000344780 VPS8Q8N3P4 1428 aa19.64■□□□□ 0.74
SNX21-202ENST00000344780 KIF21BO75037 1637 aa19.56■□□□□ 0.72
SNX21-202ENST00000344780 CUX1P39880 1505 aa19.54■□□□□ 0.72
SNX21-202ENST00000344780 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
SNX21-202ENST00000344780 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
SNX21-202ENST00000344780 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
SNX21-202ENST00000344780 CUX2O14529 1486 aa19.47■□□□□ 0.71
SNX21-202ENST00000344780 ARAP1Q96P48 1450 aa19.45■□□□□ 0.7
SNX21-202ENST00000344780 PRXQ9BXM0 1461 aa19.43■□□□□ 0.7
SNX21-202ENST00000344780 CFTRP13569 1480 aa19.41■□□□□ 0.7
SNX21-202ENST00000344780 FAM50AQ14320 339 aaKnown RBP19.41■□□□□ 0.7
SNX21-202ENST00000344780 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
SNX21-202ENST00000344780 PRKCSHP14314 528 aaPredicted RBP19.38■□□□□ 0.69
SNX21-202ENST00000344780 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
SNX21-202ENST00000344780 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
SNX21-202ENST00000344780 IGF1RP08069 1367 aa19.36■□□□□ 0.69
SNX21-202ENST00000344780 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
SNX21-202ENST00000344780 CARMIL1Q5VZK9 1371 aa19.34■□□□□ 0.69
SNX21-202ENST00000344780 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
SNX21-202ENST00000344780 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
SNX21-202ENST00000344780 FGD5Q6ZNL6 1462 aa19.29■□□□□ 0.68
SNX21-202ENST00000344780 NESP48681 1621 aa19.29■□□□□ 0.68
SNX21-202ENST00000344780 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
SNX21-202ENST00000344780 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
SNX21-202ENST00000344780 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
SNX21-202ENST00000344780 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms